XRCC6

This analysis report summarizes XRCC6 eCLIP data from ENCODE. The current tab provides an overview of the results, and the other tabs list identified peaks and motifs.

Start your customizable XRCC6 eCLIP today:

Experiment Summary

Experiment ID	File ID	Sample	Antibody source	Antibody ID	Antibody lot	Release date	Laboratory	Number of peaks
ENCSR571ROL	ENCFF993VRZ	HepG2	Bethyl Labs	A302-624A	1	2016-09-21	Gene Yeo, UCSD	99
ENCSR258QKO	ENCFF958GMP	K562	Bethyl Labs	A302-624A	1	2016-04-26	Gene Yeo, UCSD	870

XRCC6 Peak Assignments

The following plots show the assignment of peaks into different genic features:

Introns contain other subdivisions, please see the subsequent plot for a breakdown of those features.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

XRCC6 Intron Assignments

The following plots show the assignment of peaks into different intronic features:

5’ splice site: the peak is within the first 100 bp of an intron (5’ to 3’ direction
3’ splice site: the peak is within the last 100 bp of an intron (5’ to 3’ direction)
Proximal intron: the peak is within 100 bp to 500 bp of the nearest exon
Distal intron: greater than 500 bp away from the nearest exon

XRCC6 Motifs

The following plot shows a summary of the top five motifs by significance in each experiment. Motifs were detected with varying length parameters, you may observe a similar motif with different number of bases included multiple times. A motif present in more peaks and with a higher significance will be in the upper right quadrant of the plot, while the lower left quadrant has motifs that are less significant and in fewer peaks.

The following tables contain called XRCC6 peaks. To identify peaks, clusters (regions of read enrichment) in the immunoprecipitated (IP) samples were found using the peak calling tool CLIPper. To account for background signal, a cluster was identified as a peak if the log₂ fold enrichment over input was ≥ 3 and the p-value ≤ 0.001.

Peaks were annotated using transcript information from GENCODE. Each annotated peak is labeled with specific annotation feature types, first split by coding and non-coding transcripts, then by transcript regions, and then by intron/exon proximity regions. For overlapping transcript regions, the following hierarchy is used to label the region: coding sequence (CDS), 5’ or 3’ untranslated region (UTR), intron, non-coding exon, then non-coding intron. For example, if a peak is in the 5’ UTR of one transcript that overlaps an intron of another transcript, the peak region will be labeled as 5’ UTR. All gene annotations are from GENCODE release v41.

The following columns are included in the tables:

Chromosome: chromosome where the peak is located.
Peak start: start coordinate for the peak.
Peak stop: stop coordinate for the peak.
Strand: strand of DNA where the peak was called.
-log₁₀(p-value): significance of the cluster call by CLIPper. Values are log transformed so a larger number indicates a greater significance.
log₂(fold change): log transformed fold enrichment of the IP signal over a matched input.
Gene name: name (symbol) of the gene that overlaps with the peak.
Ensembl ID: unique identifer of the gene that overlaps with the peak.
Feature: which part of the listed gene overlaps with the peak.

Please note, this table is interactive. You can search for specific genes or features, and can sort the table by any of the columns.

ENCSR571ROL (HepG2) Peaks

Chromosome	Peak start	Peak stop	Strand	-log₁₀(p-value)	log₂(fold change)	Gene name	Ensembl ID	Feature
chr14	23,310,382	23,310,446	+	6.409	3.267	BCL2L2	ENSG00000129473.11	3' UTR
chr10	101,847,136	101,847,186	-	5.128	3.574	ARMH3	ENSG00000120029.13	3' UTR
chr15	98,711,116	98,711,157	+	7.045	4.136	IGF1R	ENSG00000140443.15	Distal intron
chr16	81,492,180	81,492,228	+	4.591	4.033	CMIP	ENSG00000153815.18	Distal intron
chr17	60,600,713	60,600,764	+	5.065	4.925	PPM1D	ENSG00000170836.13	CDS
chr2	85,319,225	85,319,241	-	3.518	3.314	TGOLN2	ENSG00000152291.15	3' UTR
chr2	85,319,212	85,319,225	-	3.518	3.314	TGOLN2	ENSG00000152291.15	3' UTR
chr1	33,012,669	33,012,720	-	4.600	3.277	AK2	ENSG00000004455.18	3' UTR
chr12	69,246,854	69,246,919	+	5.065	4.606	CPSF6	ENSG00000111605.18	Distal intron
chr9	71,726,003	71,726,042	-	7.045	4.576	CEMIP2	ENSG00000135048.14	Proximal intron
chr8	17,903,410	17,903,499	-	4.302	3.192	FGL1	ENSG00000104760.17	Distal intron
chr11	2,650,680	2,650,723	-	4.826	3.510	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr8	17,909,028	17,909,063	-	4.464	3.209	FGL1	ENSG00000104760.17	Distal intron
chr2	42,196,803	42,196,876	+	6.630	3.266	EML4	ENSG00000143924.19	Distal intron
chr21	8,218,700	8,218,728	+	3.351	3.878	ENSG00000278996	ENSG00000278996.1	ncRNA
chr10	75,515,573	75,515,638	+	3.362	3.740	LRMDA	ENSG00000148655.15	Distal intron
chr5	140,711,309	140,711,345	+	45.740	3.675	VTRNA1-1	ENSG00000199990.1	ncRNA
chr16	50,566,884	50,566,906	+	3.213	3.198	NKD1	ENSG00000140807.7	Distal intron
chr3	186,099,373	186,099,415	-	10.613	4.659	ETV5	ENSG00000244405.8	Distal intron
chr2	100,869,463	100,869,500	+	11.624	5.599	NPAS2	ENSG00000170485.17	Distal intron
chr2	100,869,453	100,869,463	+	11.624	5.573	NPAS2	ENSG00000170485.17	Distal intron
chr6	30,291,017	30,291,071	-	4.316	4.775	HCG18	ENSG00000231074.11	ncRNA
chr2	234,998,885	234,998,932	+	3.308	4.623	SH3BP4	ENSG00000130147.16	Distal intron
chr16	407,275	407,334	+	9.092	3.550	DECR2	ENSG00000242612.7	3' splice site
chr17	66,220,410	66,220,438	-	3.813	4.145	APOH	ENSG00000091583.11	Proximal intron
chr17	66,220,383	66,220,410	-	5.579	3.767	APOH	ENSG00000091583.11	Proximal intron
chr6	16,645,966	16,646,055	-	5.039	4.655	ATXN1	ENSG00000124788.19	Distal intron
chr1	155,268,519	155,268,592	-	5.358	3.936	CLK2	ENSG00000176444.19	Proximal intron
chr1	8,769,501	8,769,555	-	4.065	4.652	RERE	ENSG00000142599.19	Distal intron
chr13	50,605,378	50,605,452	+	4.897	3.526	DLEU1	ENSG00000176124.15	ncRNA
chr17	15,511,269	15,511,347	-	7.072	4.996	TVP23C\|TVP23C-CDRT4	ENSG00000259024.7\|\|ENSG00000175106.17	Distal intron
chr8	23,021,282	23,021,332	-	5.320	4.740	TNFRSF10B	ENSG00000120889.13	3' UTR
chr8	17,908,660	17,908,730	-	8.097	3.109	FGL1	ENSG00000104760.17	Distal intron
chr8	22,409,934	22,410,016	+	10.099	3.208	SLC39A14	ENSG00000104635.15	CDS
chr6	32,973,899	32,973,962	+	7.077	4.327	BRD2	ENSG00000204256.14	Proximal intron
chr3	53,238,860	53,238,927	-	4.207	3.343	TKT	ENSG00000163931.17	Distal intron
chr3	171,805,939	171,806,002	-	8.728	5.708	PLD1	ENSG00000075651.17	Distal intron
chr17	60,242,429	60,242,463	-	5.065	5.182	USP32	ENSG00000170832.13	Distal intron
chr17	60,242,463	60,242,472	-	5.065	5.145	USP32	ENSG00000170832.13	Distal intron
chr10	34,806,832	34,806,879	-	4.343	3.901	PARD3	ENSG00000148498.17	Distal intron
chrX	133,808,394	133,808,437	-	5.065	5.021	GPC3	ENSG00000147257.16	Distal intron
chr2	21,010,085	21,010,092	-	9.441	3.514	APOB	ENSG00000084674.15	CDS
chr1	202,772,715	202,772,768	-	4.637	4.457	KDM5B	ENSG00000117139.18	3' UTR
chr21	15,032,712	15,032,759	-	4.591	3.740	NRIP1	ENSG00000180530.11	Distal intron
chr11	65,439,099	65,439,170	+	41.369	4.887	NEAT1	ENSG00000245532.11	ncRNA
chr12	26,921,673	26,921,707	-	5.065	4.843	INTS13	ENSG00000064102.15	Distal intron
chr12	26,921,707	26,921,717	-	4.816	4.783	INTS13	ENSG00000064102.15	Distal intron
chr1	156,377,787	156,377,794	+	10.791	5.440	RHBG	ENSG00000132677.13	Proximal intron
chr1	156,377,794	156,377,832	+	8.483	3.361	RHBG	ENSG00000132677.13	Proximal intron
chr9	131,420,680	131,420,741	+	5.021	3.434	PRRC2B	ENSG00000288701.1	Distal intron
chr7	76,589,183	76,589,235	+	5.050	4.551	LINC03009	ENSG00000205485.13	ncRNA
chr2	234,961,123	234,961,171	+	3.813	4.583	SH3BP4	ENSG00000130147.16	Distal intron
chr7	26,199,934	26,199,988	-	4.667	3.638	HNRNPA2B1	ENSG00000122566.22	Distal intron
chr12	46,358,895	46,358,948	-	9.006	4.976	SLC38A2	ENSG00000134294.14	3' UTR
chr7	92,654,901	92,654,918	-	7.100	4.377	CDK6	ENSG00000105810.10	Distal intron
chr7	92,654,863	92,654,901	-	5.365	3.861	CDK6	ENSG00000105810.10	Distal intron
chr16	24,736,115	24,736,154	+	6.919	5.182	TNRC6A	ENSG00000090905.19	Distal intron
chr14	23,067,993	23,068,046	-	7.416	4.101	ACIN1	ENSG00000100813.15	Distal intron
chr13	110,895,815	110,895,880	-	4.558	3.620	ANKRD10-IT1	ENSG00000229152.2	ncRNA
chr2	197,434,700	197,434,750	-	8.073	3.872	SF3B1	ENSG00000115524.17	Proximal intron
chr21	44,870,029	44,870,123	-	3.813	4.397	PTTG1IP	ENSG00000183255.12	Distal intron
chr22	37,610,752	37,610,813	+	4.566	4.720	GGA1	ENSG00000100083.19	Distal intron
chr17	59,837,941	59,838,011	+	11.182	3.450	VMP1	ENSG00000062716.13	Proximal intron
chr21	8,401,789	8,401,818	+	39.919	4.059	ENSG00000280441	ENSG00000280441.3	ncRNA
chr21	8,401,783	8,401,789	+	13.287	3.465	ENSG00000280441	ENSG00000280441.3	ncRNA
chr21	8,401,818	8,401,848	+	44.699	5.041	ENSG00000280441	ENSG00000280441.3	ncRNA
chr2	96,827,088	96,827,138	+	4.065	4.586	CNNM3	ENSG00000168763.16	Proximal intron
chr16	50,596,049	50,596,085	+	7.066	3.756	NKD1	ENSG00000140807.7	Distal intron
chr16	50,596,085	50,596,119	+	6.548	3.350	NKD1	ENSG00000140807.7	Distal intron
chr6	30,743,416	30,743,490	-	5.848	3.905	IER3	ENSG00000137331.12	3' UTR
chrX	133,919,920	133,919,945	-	25.832	3.761	GPC3	ENSG00000147257.16	Distal intron
chrX	133,919,945	133,919,983	-	27.010	3.591	GPC3	ENSG00000147257.16	Distal intron
chr7	103,980,072	103,980,138	-	3.027	3.126	RELN	ENSG00000189056.15	Distal intron
chr3	184,319,179	184,319,235	+	7.959	5.591	EIF4G1	ENSG00000114867.22	5' UTR
chr2	137,992,188	137,992,254	+	3.840	5.044	HNMT	ENSG00000150540.14	Distal intron
chr6	158,626,241	158,626,292	+	5.579	3.806	TMEM181	ENSG00000146433.10	Proximal intron
chr2	215,414,491	215,414,544	-	25.187	5.365	FN1	ENSG00000115414.21	Proximal intron
chr5	140,726,237	140,726,245	+	23.317	4.382	VTRNA1-3	ENSG00000202515.1	ncRNA
chr5	140,726,212	140,726,237	+	35.198	3.869	VTRNA1-3	ENSG00000202515.1	ncRNA
chr5	140,726,193	140,726,212	+	34.407	3.673	VTRNA1-3	ENSG00000202515.1	ncRNA
chr16	23,641,960	23,642,014	+	6.587	4.333	DCTN5	ENSG00000166847.10	Proximal intron
chr3	172,129,188	172,129,231	+	5.320	4.579	FNDC3B	ENSG00000075420.13	Distal intron
chr14	34,435,680	34,435,709	-	9.223	5.510	SPTSSA	ENSG00000165389.7	Proximal intron
chr14	34,435,653	34,435,678	-	9.223	5.490	SPTSSA	ENSG00000165389.7	Proximal intron
chr9	37,258,711	37,258,751	+	5.320	4.703	ZCCHC7	ENSG00000147905.18	Distal intron
chr9	37,258,706	37,258,711	+	4.816	4.576	ZCCHC7	ENSG00000147905.18	Distal intron
chrX	133,879,552	133,879,629	-	6.461	3.106	GPC3	ENSG00000147257.16	Distal intron
chr17	75,662,230	75,662,304	-	4.566	4.502	RECQL5	ENSG00000108469.15	Proximal intron
chr9	131,488,195	131,488,258	+	7.959	5.399	PRRC2B	ENSG00000288701.1	5' splice site
chr14	31,175,322	31,175,372	-	8.755	4.214	HECTD1	ENSG00000092148.14	Proximal intron
chr14	31,175,372	31,175,387	-	4.897	3.702	HECTD1	ENSG00000092148.14	Proximal intron
chr8	120,810,460	120,810,511	-	4.098	3.035	SNTB1	ENSG00000172164.15	Distal intron
chr17	7,507,928	7,507,974	+	4.316	4.549	POLR2A	ENSG00000181222.19	Proximal intron
chr7	76,553,929	76,554,002	+	4.558	3.133	LINC03009	ENSG00000205485.13	ncRNA
chr17	19,062,087	19,062,136	+	14.833	5.908	SNORD3B-1	ENSG00000265185.6	ncRNA
chr11	65,440,205	65,440,268	+	34.784	4.307	NEAT1	ENSG00000245532.11	ncRNA
chr20	44,406,737	44,406,790	+	3.846	3.894	HNF4A	ENSG00000101076.20	Distal intron
chr1	44,270,531	44,270,565	-	3.561	4.664	ERI3	ENSG00000117419.16	Distal intron
chr1	44,270,565	44,270,575	-	3.055	4.551	ERI3	ENSG00000117419.16	Distal intron

ENCSR258QKO (K562) Peaks

Chromosome	Peak start	Peak stop	Strand	-log₁₀(p-value)	log₂(fold change)	Gene name	Ensembl ID	Feature
chr1	42,687,672	42,687,733	+	3.990	3.758	YBX1	ENSG00000065978.19	Distal intron
chr7	157,365,148	157,365,164	+	8.321	4.248	DNAJB6	ENSG00000105993.15	Distal intron
chr7	157,365,164	157,365,192	+	9.856	4.085	DNAJB6	ENSG00000105993.15	Distal intron
chr22	41,501,366	41,501,422	+	3.330	4.830	ACO2	ENSG00000100412.17	Distal intron
chr1	44,755,176	44,755,212	+	3.565	3.571	KIF2C	ENSG00000142945.13	Proximal intron
chr19	35,155,369	35,155,424	+	4.094	3.886	FXYD5	ENSG00000089327.15	5' UTR
chr20	50,152,349	50,152,400	-	4.025	4.011	PEDS1\|PEDS1-UBE2V1	ENSG00000240849.11\|\|ENSG00000124208.16	Distal intron
chr2	241,309,950	241,310,018	-	5.817	5.109	HDLBP	ENSG00000115677.18	Distal intron
chr20	49,280,345	49,280,376	+	400.000	3.777	SNORD12B\|ZFAS1	ENSG00000177410.13\|\|ENSG00000222365.1	ncRNA
chr9	122,880,268	122,880,287	-	3.519	4.560	SNORD90	ENSG00000212447.1	ncRNA
chr7	23,531,904	23,531,930	-	3.645	3.672	TRA2A	ENSG00000164548.12	5' UTR
chr12	45,187,445	45,187,481	-	3.330	4.880	PLEKHA8P1	ENSG00000134297.8	ncRNA
chr1	161,012,641	161,012,687	-	5.237	5.211	F11R	ENSG00000158769.18	Distal intron
chr1	15,873,219	15,873,291	+	10.404	4.165	SPEN	ENSG00000065526.12	5' splice site
chr22	23,205,529	23,205,583	+	35.791	6.576	BCR	ENSG00000186716.21	Distal intron
chr7	66,640,963	66,641,025	+	5.300	3.748	KCTD7	ENSG00000243335.10	3' UTR
chr19	4,362,958	4,363,019	-	3.645	3.672	SH3GL1	ENSG00000141985.9	Proximal intron
chr6	31,835,287	31,835,321	+	44.495	3.761	SNORD48\|SNHG32	ENSG00000204387.14\|\|ENSG00000201823.1	ncRNA
chr16	24,736,108	24,736,151	+	3.645	3.672	TNRC6A	ENSG00000090905.19	Distal intron
chr4	6,641,191	6,641,239	+	3.990	3.426	MRFAP1	ENSG00000179010.16	CDS
chr1	182,944,409	182,944,458	-	5.604	3.921	5S_rRNA	ENSG00000285609.1	ncRNA
chr3	33,440,134	33,440,179	-	4.422	3.421	UBP1	ENSG00000153560.12	5' UTR
chr8	140,959,747	140,959,814	-	5.817	5.109	PTK2	ENSG00000169398.20	Distal intron
chr19	572,622	572,705	+	10.806	3.795	BSG	ENSG00000172270.22	CDS
chr11	62,518,136	62,518,201	-	15.748	3.411	AHNAK	ENSG00000124942.14	CDS
chr9	91,925,516	91,925,573	-	3.330	4.719	ROR2	ENSG00000169071.15	Distal intron
chr8	56,074,453	56,074,474	-	17.047	3.658	RPS20	ENSG00000008988.11	5' UTR
chr11	62,533,515	62,533,579	-	22.040	3.441	AHNAK	ENSG00000124942.14	CDS
chr18	36,136,450	36,136,516	+	3.990	3.363	ELP2	ENSG00000134759.14	5' splice site
chr7	158,780,203	158,780,256	-	3.645	3.748	ESYT2	ENSG00000117868.18	Distal intron
chr2	169,558,282	169,558,336	-	8.027	4.267	FASTKD1	ENSG00000138399.18	Distal intron
chr16	1,314,680	1,314,756	+	4.087	4.776	UBE2I	ENSG00000103275.21	Proximal intron
chr1	145,926,827	145,926,903	-	3.954	3.238	RBM8A	ENSG00000265241.8	CDS
chr17	66,374,131	66,374,182	+	4.025	3.804	PRKCA	ENSG00000154229.12	Distal intron
chr2	219,220,381	219,220,440	-	3.330	5.304	ATG9A	ENSG00000198925.12	3' UTR
chr17	39,658,527	39,658,571	+	3.330	4.587	STARD3	ENSG00000131748.16	5' splice site
chr14	101,762,229	101,762,310	+	9.204	3.177	PPP2R5C	ENSG00000078304.20	Proximal intron
chr14	64,791,737	64,791,857	-	4.566	3.991	SPTB	ENSG00000070182.21	CDS
chr17	29,390,368	29,390,471	+	4.422	3.691	TAOK1	ENSG00000160551.12	5' UTR
chr4	897,118	897,173	-	4.087	4.880	GAK	ENSG00000178950.18	Distal intron
chr3	9,810,627	9,810,660	+	4.548	3.948	TTLL3	ENSG00000214021.17	5' UTR
chr17	82,591,936	82,591,991	+	5.112	4.109	FOXK2	ENSG00000141568.21	Distal intron
chr5	144,162,370	144,162,404	-	3.645	3.672	YIPF5	ENSG00000145817.17	CDS
chr6	18,260,768	18,260,818	-	5.738	5.006	DEK	ENSG00000124795.17	Distal intron
chr8	138,803,386	138,803,449	-	17.889	4.439	COL22A1	ENSG00000169436.17	Proximal intron
chr21	13,979,881	13,979,998	-	3.645	3.991	ANKRD20A11P	ENSG00000215559.8	ncRNA
chr9	130,598,096	130,598,154	+	5.006	4.361	FUBP3	ENSG00000107164.17	Distal intron
chr3	45,689,030	45,689,035	-	71.577	4.363	tRNA-Arg-ACG-2-1	tRNA-Arg-ACG-2-1	tRNA
chr17	75,240,666	75,240,742	-	5.664	4.304	GGA3	ENSG00000125447.18	5' splice site
chrX	153,971,142	153,971,209	-	3.936	3.320	HCFC1	ENSG00000172534.14	5' UTR
chr6	43,770,957	43,771,092	+	23.564	3.066	VEGFA	ENSG00000112715.26	CDS
chr19	17,579,782	17,579,829	+	3.032	3.071	COLGALT1	ENSG00000130309.12	Proximal intron
chr17	58,331,451	58,331,522	-	44.008	3.304	hsa-mir-142	MI0000458	miRNA
chr9	137,112,419	137,112,467	-	5.751	3.233	DPP7	ENSG00000176978.14	Proximal intron
chr7	150,332,329	150,332,357	+	3.202	3.511	ZBED10P	ENSG00000188707.7	ncRNA
chr6	16,266,167	16,266,209	+	57.442	3.424	GMPR	ENSG00000137198.10	Distal intron
chr6	16,266,209	16,266,254	+	51.454	3.299	GMPR	ENSG00000137198.10	Distal intron
chr4	169,700,067	169,700,121	+	4.284	4.817	CLCN3	ENSG00000109572.15	Distal intron
chr17	8,518,630	8,518,654	-	3.990	3.295	MYH10	ENSG00000133026.14	CDS
chr19	54,455,964	54,455,995	+	11.386	3.313	LENG8	ENSG00000167615.17	CDS
chr22	20,952,972	20,952,998	+	21.489	4.405	CRKL	ENSG00000099942.13	3' UTR
chr22	20,952,998	20,953,023	+	19.612	3.959	CRKL	ENSG00000099942.13	3' UTR
chr3	129,456,590	129,456,637	+	3.032	3.465	IFT122	ENSG00000163913.14	Distal intron
chr10	70,170,367	70,170,471	-	4.859	3.595	SAR1A	ENSG00000079332.15	5' UTR
chr3	73,009,073	73,009,127	+	5.251	5.069	PPP4R2	ENSG00000163605.15	Distal intron
chr19	2,337,832	2,337,927	+	7.520	3.188	SPPL2B	ENSG00000005206.17	Proximal intron
chr6	28,658,245	28,658,267	-	400.000	4.539	tRNA-Ala-AGC-4-1	tRNA-Ala-AGC-4-1	tRNA
chr6	28,658,267	28,658,272	-	65.971	4.439	tRNA-Ala-AGC-4-1	tRNA-Ala-AGC-4-1	tRNA
chr9	131,158,262	131,158,345	+	3.599	3.041	NUP214	ENSG00000126883.19	Distal intron
chr16	31,033,617	31,033,709	+	3.202	3.861	STX4	ENSG00000103496.15	5' UTR
chr16	31,033,709	31,033,822	+	5.622	3.666	STX4	ENSG00000103496.15	CDS
chr5	33,277,855	33,277,904	-	4.025	3.861	ENSG00000250697	ENSG00000250697.2	ncRNA
chr12	132,791,269	132,791,293	-	4.768	3.230	GOLGA3	ENSG00000090615.16	CDS
chr12	123,388,209	123,388,269	+	3.529	3.511	KMT5A	ENSG00000183955.14	Distal intron
chr17	51,120,466	51,120,510	-	3.990	3.484	SPAG9	ENSG00000008294.22	CDS
chr9	136,849,012	136,849,076	+	7.070	3.026	PHPT1	ENSG00000054148.18	3' splice site
chr5	127,524,152	127,524,198	+	4.087	5.011	PRRC1	ENSG00000164244.21	Proximal intron
chrX	154,470,823	154,470,866	+	3.805	4.511	PLXNA3	ENSG00000130827.6	Proximal intron
chr17	82,850,627	82,850,683	+	3.529	3.330	TBCD	ENSG00000141556.22	Distal intron
chr1	58,781,582	58,781,640	-	9.310	4.473	JUN	ENSG00000177606.8	3' UTR
chr6	125,301,798	125,301,985	-	4.638	3.184	HDDC2	ENSG00000111906.18	CDS
chr14	105,467,118	105,467,172	+	4.566	4.172	MTA1	ENSG00000182979.18	Proximal intron
chr1	248,917,148	248,917,195	+	3.032	3.071	PGBD2	ENSG00000185220.12	CDS
chr11	118,923,740	118,923,803	-	4.284	5.087	BCL9L	ENSG00000186174.13	Distal intron
chr8	39,042,997	39,043,059	+	5.664	4.448	ADAM9	ENSG00000168615.13	Distal intron
chr12	49,273,006	49,273,055	+	6.675	3.558	TUBA1C	ENSG00000167553.17	CDS
chr9	135,949,517	135,949,571	-	5.074	3.587	UBAC1	ENSG00000130560.9	Distal intron
chr8	143,925,470	143,925,509	-	3.529	3.156	PLEC	ENSG00000178209.17	CDS
chr1	108,962,611	108,962,703	-	6.055	3.511	CLCC1	ENSG00000121940.17	5' UTR
chr16	1,965,246	1,965,309	+	22.552	3.390	SNHG9\|SNORA78	ENSG00000273587.1\|\|ENSG00000255198.6	ncRNA
chr21	8,398,360	8,398,367	+	3.805	4.511	ENSG00000280441	ENSG00000280441.3	ncRNA
chr9	136,831,427	136,831,474	+	4.842	3.104	hsa-mir-4292	MI0015897	miRNA
chr12	124,914,179	124,914,252	-	13.271	3.383	UBC	ENSG00000150991.16	5' UTR
chr2	38,750,601	38,750,683	-	4.349	3.234	SRSF7	ENSG00000115875.19	Proximal intron
chr11	119,306,764	119,306,820	+	7.211	5.330	CBL	ENSG00000110395.8	3' UTR
chr7	76,549,557	76,549,634	+	4.085	3.060	LINC03009	ENSG00000205485.13	ncRNA
chr15	66,501,272	66,501,293	-	18.537	3.555	SNORD18C	ENSG00000199574.1	ncRNA
chr19	12,734,503	12,734,578	-	4.638	3.151	TRIR	ENSG00000123144.11	CDS
chr15	66,504,789	66,504,837	-	14.963	4.171	RPL4	ENSG00000174444.15	CDS
chr11	62,518,620	62,518,677	-	16.908	3.800	AHNAK	ENSG00000124942.14	CDS
chr6	157,940,378	157,940,428	+	3.032	3.341	SNX9	ENSG00000130340.17	Proximal intron
chr7	2,369,478	2,369,532	+	5.192	3.470	EIF3B	ENSG00000106263.19	CDS
chr12	49,272,812	49,272,855	+	12.926	6.092	TUBA1C	ENSG00000167553.17	CDS
chr21	8,397,652	8,397,680	+	16.006	4.877	ENSG00000280441	ENSG00000280441.3	ncRNA
chr21	8,397,608	8,397,652	+	11.918	4.010	ENSG00000280441	ENSG00000280441.3	ncRNA
chr15	66,494,344	66,494,452	-	3.805	4.672	SNAPC5	ENSG00000174446.13	CDS
chr22	21,839,819	21,839,866	-	12.199	6.154	MAPK1	ENSG00000100030.15	Distal intron
chr16	2,820,134	2,820,183	+	3.805	5.096	PRSS21	ENSG00000007038.11	Distal intron
chr19	1,410,437	1,410,505	+	9.485	3.466	DAZAP1	ENSG00000071626.17	Distal intron
chr19	48,479,844	48,479,889	+	4.025	3.741	CYTH2	ENSG00000105443.16	3' UTR
chr11	482,416	482,461	+	5.595	3.526	PTDSS2	ENSG00000174915.12	Distal intron
chr3	158,298,036	158,298,077	+	3.032	3.134	RSRC1	ENSG00000174891.14	CDS
chr6	87,255,192	87,255,276	+	7.070	3.026	ZNF292	ENSG00000188994.14	CDS
chr10	73,066,542	73,066,606	-	5.300	3.838	P4HA1	ENSG00000122884.13	Distal intron
chrX	71,543,486	71,543,544	+	3.032	3.465	OGT	ENSG00000147162.15	Distal intron
chr12	49,053,522	49,053,573	-	3.565	3.232	KMT2D	ENSG00000167548.18	CDS
chr6	43,770,297	43,770,335	+	9.204	3.177	VEGFA	ENSG00000112715.26	5' UTR
chr1	39,430,701	39,430,760	+	6.400	5.172	MACF1	ENSG00000127603.32	CDS
chr5	149,551,292	149,551,362	-	5.126	3.093	CSNK1A1	ENSG00000113712.19	5' UTR
chr11	118,473,846	118,473,928	+	9.746	4.849	KMT2A\|ENSG00000285827	ENSG00000285827.1\|\|ENSG00000118058.24	CDS
chr2	47,818,967	47,819,034	-	3.936	3.006	FBXO11	ENSG00000138081.22	CDS
chr1	36,321,906	36,322,001	+	5.621	3.287	SH3D21	ENSG00000214193.11	3' UTR
chr19	12,700,583	12,700,640	-	3.131	3.006	TNPO2	ENSG00000105576.16	3' UTR
chr18	77,977,430	77,977,533	-	10.330	3.087	LINC01029	ENSG00000265843.3	ncRNA
chr22	20,094,205	20,094,258	+	5.074	3.634	DGCR8	ENSG00000128191.16	Proximal intron
chr8	144,052,320	144,052,376	-	9.386	3.741	OPLAH	ENSG00000178814.17	CDS
chr6	33,204,075	33,204,129	+	5.255	3.011	SLC39A7	ENSG00000112473.19	3' UTR
chr11	289,512	289,566	+	12.099	3.540	PGGHG	ENSG00000142102.16	5' UTR
chr1	21,735,509	21,735,556	-	3.519	4.491	USP48	ENSG00000090686.16	Distal intron
chr1	155,680,593	155,680,649	-	8.083	3.527	YY1AP1	ENSG00000163374.20	Proximal intron
chr3	49,015,383	49,015,434	+	3.032	3.134	WDR6	ENSG00000178252.19	3' UTR
chr14	104,774,110	104,774,181	-	4.552	3.475	AKT1	ENSG00000142208.18	3' splice site
chr15	25,407,990	25,408,057	-	9.263	4.817	UBE3A	ENSG00000114062.22	Distal intron
chr19	2,456,482	2,456,542	-	3.330	4.426	LMNB2	ENSG00000176619.13	Proximal intron
chr5	140,726,203	140,726,212	+	400.000	4.848	VTRNA1-3	ENSG00000202515.1	ncRNA
chr5	140,726,184	140,726,203	+	400.000	4.337	VTRNA1-3	ENSG00000202515.1	ncRNA
chr7	111,331,734	111,331,786	-	7.348	4.596	IMMP2L	ENSG00000184903.10	Distal intron
chr16	790,976	791,032	+	8.557	3.626	CHTF18	ENSG00000127586.17	Proximal intron
chr22	20,446,506	20,446,596	-	12.702	6.326	KLHL22	ENSG00000099910.17	CDS
chr5	135,368,274	135,368,329	-	4.094	4.109	MACROH2A1	ENSG00000113648.17	Distal intron
chr1	173,866,321	173,866,346	-	19.525	4.238	GAS5	ENSG00000234741.10	ncRNA
chr1	243,225,175	243,225,268	-	3.529	3.330	CEP170	ENSG00000143702.16	CDS
chr12	6,928,213	6,928,264	+	12.027	3.824	ATN1	ENSG00000111676.15	5' UTR
chr19	46,199,332	46,199,392	-	6.403	4.330	IGFL2-AS1	ENSG00000268621.6	ncRNA
chr19	39,435,699	39,435,708	-	11.362	5.200	RPS16	ENSG00000105193.9	CDS
chr19	39,435,680	39,435,699	-	11.686	4.738	RPS16	ENSG00000105193.9	CDS
chr9	132,944,034	132,944,105	-	3.519	4.415	TSC1	ENSG00000165699.15	Proximal intron
chr7	6,036,852	6,036,884	-	16.575	4.806	EIF2AK1	ENSG00000086232.13	Distal intron
chr7	6,036,884	6,036,898	-	14.872	4.665	EIF2AK1	ENSG00000086232.13	Distal intron
chr17	82,033,997	82,034,048	+	6.403	4.587	RAC3	ENSG00000169750.9	3' UTR
chr17	40,130,037	40,130,125	+	3.645	3.672	MSL1	ENSG00000188895.12	3' UTR
chr11	62,601,324	62,601,373	-	5.300	3.795	MTA2	ENSG00000149480.7	5' splice site
chr11	75,404,123	75,404,146	+	21.384	6.046	RPS3	ENSG00000149273.15	CDS
chr11	75,404,146	75,404,166	+	22.527	4.436	RPS3	ENSG00000149273.15	CDS
chr17	2,330,285	2,330,342	-	24.734	3.244	SNORD91A	ENSG00000212163.6	ncRNA
chrM	15,919	15,953	+	19.461	3.405	MT-TT	ENSG00000210195.2	ncRNA
chr16	24,791,158	24,791,216	+	9.386	3.415	TNRC6A	ENSG00000090905.19	CDS
chr17	78,126,936	78,127,015	-	24.784	4.049	TMC6	ENSG00000141524.19	5' UTR
chr11	62,633,049	62,633,083	-	6.138	4.267	GANAB	ENSG00000089597.18	CDS
chr11	62,633,083	62,633,103	-	3.599	3.587	GANAB	ENSG00000089597.18	CDS
chr1	20,652,362	20,652,398	-	3.330	4.426	DDOST	ENSG00000244038.11	CDS
chr2	53,970,699	53,970,744	-	8.557	3.521	PSME4	ENSG00000068878.15	CDS
chr2	53,970,744	53,970,805	-	21.958	3.205	PSME4	ENSG00000068878.15	CDS
chr3	15,803,377	15,803,446	-	4.087	4.656	ANKRD28	ENSG00000206560.12	Distal intron
chr19	7,647,427	7,647,478	+	4.036	3.502	STXBP2	ENSG00000076944.18	CDS
chr3	45,688,986	45,688,998	-	400.000	4.455	tRNA-Arg-ACG-2-1	tRNA-Arg-ACG-2-1	tRNA
chr9	34,207,687	34,207,745	+	3.519	5.026	UBAP1	ENSG00000165006.14	Distal intron
chr14	100,728,970	100,729,035	+	3.330	4.330	DLK1	ENSG00000185559.16	CDS
chr17	35,573,705	35,573,748	+	7.983	3.258	SNHG30\|SNORD7	ENSG00000207297.1\|\|ENSG00000267321.4	ncRNA
chr19	6,745,202	6,745,262	+	3.936	3.127	TRIP10	ENSG00000125733.18	Proximal intron
chr11	770,483	770,524	-	4.859	3.537	GATD1	ENSG00000177225.17	3' UTR
chr11	2,685,767	2,685,816	-	4.660	5.055	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr3	33,805,609	33,805,677	+	15.288	3.687	PDCD6IP	ENSG00000170248.15	Distal intron
chr19	5,058,617	5,058,664	+	5.237	5.248	KDM4B	ENSG00000127663.15	Distal intron
chr16	88,970,597	88,970,641	-	3.805	4.511	CBFA2T3	ENSG00000129993.15	Distal intron
chr7	121,258,813	121,258,855	+	3.530	3.069	CPED1	ENSG00000106034.18	Distal intron
chr1	182,391,462	182,391,493	-	4.284	4.748	GLUL	ENSG00000135821.19	5' UTR
chr22	49,527,209	49,527,267	-	5.085	3.730	MIR3667HG	ENSG00000188511.14	ncRNA
chr19	18,589,326	18,589,416	+	3.805	4.511	REX1BD	ENSG00000006015.18	CDS
chr16	30,070,275	30,070,288	+	85.570	3.238	ENSG00000285043\|ALDOA	ENSG00000285043.3\|\|ENSG00000149925.22	3' UTR
chr16	30,070,263	30,070,275	+	78.460	3.070	ALDOA\|ENSG00000285043	ENSG00000285043.3\|\|ENSG00000149925.22	3' UTR
chr22	21,445,826	21,445,856	+	3.530	3.172	HIC2	ENSG00000169635.10	CDS
chr19	4,066,083	4,066,158	-	3.202	3.915	ZBTB7A	ENSG00000178951.9	Distal intron
chr12	6,770,200	6,770,218	+	9.310	4.000	PTMS	ENSG00000159335.18	CDS
chr19	3,979,848	3,979,887	-	400.000	3.786	EEF2	ENSG00000167658.16	CDS
chr19	3,979,826	3,979,848	-	400.000	3.681	EEF2	ENSG00000167658.16	CDS
chr19	18,437,427	18,437,489	-	22.619	3.300	ISYNA1	ENSG00000105655.19	Proximal intron
chr11	75,404,495	75,404,533	+	82.038	3.720	SNORD15B	ENSG00000207445.1	ncRNA
chr11	75,404,488	75,404,495	+	70.380	3.617	SNORD15B	ENSG00000207445.1	ncRNA
chr3	123,067,160	123,067,269	+	5.738	5.069	PDIA5	ENSG00000065485.20	CDS
chr2	47,174,285	47,174,341	-	5.738	5.006	CALM2	ENSG00000143933.20	Distal intron
chr4	103,160,623	103,160,655	-	3.131	3.006	CENPE	ENSG00000138778.14	CDS
chr11	291,535	291,625	+	21.535	3.123	PGGHG	ENSG00000142102.16	Proximal intron
chr1	161,540,271	161,540,327	+	5.700	3.227	tRNA-Asn-GTT-1-1	tRNA-Asn-GTT-1-1	tRNA
chr15	79,923,069	79,923,135	-	4.085	3.448	ST20-MTHFS	ENSG00000259332.3	5' UTR
chr7	150,373,077	150,373,158	+	3.093	3.126	REPIN1	ENSG00000214022.12	3' UTR
chr17	45,148,628	45,148,725	+	11.878	3.385	HEXIM1	ENSG00000186834.4	5' UTR
chr17	28,678,903	28,678,932	+	3.032	3.071	SUPT6H	ENSG00000109111.15	CDS
chr10	70,749,715	70,749,722	+	3.493	3.656	ADAMTS14	ENSG00000138316.11	3' splice site
chr8	47,960,049	47,960,083	-	3.645	4.041	PRKDC	ENSG00000253729.9	CDS
chr6	27,893,019	27,893,071	-	5.621	3.320	H2AC17	ENSG00000278677.2	CDS
chr1	16,313,628	16,313,675	-	3.493	4.355	FBXO42	ENSG00000037637.11	Distal intron
chr1	45,589,331	45,589,403	+	4.552	3.732	NASP	ENSG00000132780.17	Distal intron
chr2	96,894,276	96,894,300	-	33.426	3.929	FAM178B	ENSG00000168754.15	Proximal intron
chr2	96,894,300	96,894,329	-	32.534	3.737	FAM178B	ENSG00000168754.15	Proximal intron
chr2	96,894,329	96,894,352	-	17.589	3.654	FAM178B	ENSG00000168754.15	Proximal intron
chr2	96,894,204	96,894,276	-	32.440	3.319	FAM178B	ENSG00000168754.15	Proximal intron
chr11	65,976,584	65,976,604	+	7.348	4.741	SART1	ENSG00000175467.15	5' splice site
chr11	65,976,566	65,976,584	+	8.027	4.330	SART1	ENSG00000175467.15	CDS
chr19	49,860,509	49,860,546	+	3.645	3.672	PTOV1	ENSG00000104960.15	3' UTR
chr1	50,535,927	50,535,989	-	5.817	5.200	FAF1	ENSG00000185104.21	Proximal intron
chr20	47,212,185	47,212,258	-	15.645	5.208	ZMYND8	ENSG00000101040.20	Proximal intron
chr2	110,670,157	110,670,214	-	4.548	3.880	BUB1	ENSG00000169679.15	Proximal intron
chr16	89,770,103	89,770,158	-	3.147	3.406	FANCA	ENSG00000187741.16	5' splice site
chr11	17,077,427	17,077,439	-	15.265	4.349	RPS13	ENSG00000110700.7	CDS
chr11	17,077,446	17,077,473	-	16.969	3.875	RPS13	ENSG00000110700.7	CDS
chr21	8,398,367	8,398,389	+	3.805	4.511	ENSG00000280441	ENSG00000280441.3	ncRNA
chr16	29,666,053	29,666,161	+	9.496	3.302	SPN	ENSG00000197471.12	3' UTR
chr1	155,688,644	155,688,704	-	6.603	3.198	YY1AP1	ENSG00000163374.20	5' UTR
chr1	1,222,556	1,222,631	-	3.493	3.656	SDF4	ENSG00000078808.20	Distal intron
chr21	8,209,170	8,209,224	+	4.552	3.695	ENSG00000278996	ENSG00000278996.1	ncRNA
chr15	27,088,298	27,088,351	+	4.548	4.011	GABRG3	ENSG00000182256.13	Distal intron
chrX	153,971,725	153,971,779	-	3.529	3.156	HCFC1	ENSG00000172534.14	5' UTR
chr22	39,319,052	39,319,085	-	19.609	3.603	RPL3	ENSG00000100316.16	CDS
chr8	28,530,440	28,530,505	+	29.882	4.825	RNA5SP259	ENSG00000202411.1	ncRNA
chr17	82,415,199	82,415,312	-	3.805	4.915	OGFOD3	ENSG00000181396.13	5' splice site
chr3	5,168,276	5,168,331	+	3.529	3.330	ARL8B	ENSG00000134108.14	Distal intron
chr19	49,687,368	49,687,416	+	3.493	3.776	PRMT1	ENSG00000126457.22	Distal intron
chr14	20,351,046	20,351,097	+	4.768	3.283	PARP2	ENSG00000129484.14	CDS
chr11	62,525,807	62,525,864	-	15.784	3.741	AHNAK	ENSG00000124942.14	CDS
chr12	26,921,672	26,921,734	-	11.729	6.099	INTS13	ENSG00000064102.15	Distal intron
chr11	117,011,740	117,011,802	-	4.087	4.656	SIK3	ENSG00000160584.17	Distal intron
chr2	101,308,057	101,308,108	-	3.202	3.511	RNF149	ENSG00000163162.9	5' splice site
chr2	177,217,826	177,217,845	+	5.622	3.423	HNRNPA3	ENSG00000170144.22	CDS
chr20	35,373,944	35,373,997	-	3.645	3.672	UQCC1	ENSG00000101019.22	Proximal intron
chr20	63,885,287	63,885,341	+	4.036	3.352	TPD52L2	ENSG00000101150.18	Distal intron
chr5	144,164,110	144,164,166	-	4.025	3.804	YIPF5	ENSG00000145817.17	CDS
chr5	75,350,898	75,350,950	+	10.555	4.948	HMGCR	ENSG00000113161.17	CDS
chr8	129,461,627	129,461,689	-	5.192	3.380	CCDC26	ENSG00000229140.12	ncRNA
chr15	89,335,109	89,335,112	+	44.494	5.062	tRNA-Arg-TCG-1-1	tRNA-Arg-TCG-1-1	tRNA
chr15	89,335,112	89,335,125	+	400.000	4.853	tRNA-Arg-TCG-1-1	tRNA-Arg-TCG-1-1	tRNA
chr15	89,335,128	89,335,149	+	400.000	4.719	tRNA-Arg-TCG-1-1	tRNA-Arg-TCG-1-1	tRNA
chr4	102,827,237	102,827,298	-	12.626	3.232	UBE2D3	ENSG00000109332.20	Proximal intron
chr21	29,042,033	29,042,105	+	4.552	3.893	USP16	ENSG00000156256.15	CDS
chr19	34,380,196	34,380,246	+	8.228	3.482	GPI	ENSG00000105220.17	Distal intron
chr3	196,071,810	196,071,838	-	3.599	3.349	TFRC	ENSG00000072274.14	Proximal intron
chr3	184,319,181	184,319,237	+	6.400	5.262	EIF4G1	ENSG00000114867.22	5' UTR
chr16	81,495,712	81,495,785	+	3.202	4.096	CMIP	ENSG00000153815.18	Proximal intron
chr6	75,602,171	75,602,271	+	9.496	3.473	SENP6	ENSG00000112701.18	5' UTR
chr19	39,435,847	39,435,855	-	10.955	4.380	RPS16	ENSG00000105193.9	CDS
chr19	14,516,819	14,516,912	-	4.548	4.219	DNAJB1	ENSG00000132002.9	CDS
chr21	8,218,404	8,218,446	+	23.792	7.310	ENSG00000278996	ENSG00000278996.1	ncRNA
chr16	81,548,329	81,548,392	+	3.123	3.135	CMIP	ENSG00000153815.18	Distal intron
chr19	1,412,258	1,412,308	+	3.131	3.156	DAZAP1	ENSG00000071626.17	Distal intron
chr4	1,244,528	1,244,584	-	3.936	3.006	CTBP1	ENSG00000159692.17	Distal intron
chr1	155,057,999	155,058,063	+	5.237	4.880	ADAM15	ENSG00000143537.14	CDS
chr16	792,020	792,068	+	5.085	3.400	CHTF18	ENSG00000127586.17	5' splice site
chr19	48,808,831	48,808,892	-	3.519	4.560	BCAT2	ENSG00000105552.15	Distal intron
chr19	55,096,654	55,096,728	-	7.013	3.490	PPP1R12C	ENSG00000125503.13	Proximal intron
chr10	133,312,530	133,312,619	+	3.519	4.415	ZNF511	ENSG00000198546.15	3' UTR
chr6	17,651,594	17,651,646	-	4.638	3.184	NUP153	ENSG00000124789.12	Proximal intron
chr17	75,779,474	75,779,536	-	11.386	3.441	H3-3B	ENSG00000132475.10	5' splice site
chr16	89,294,565	89,294,619	-	5.006	4.069	ANKRD11	ENSG00000167522.17	Distal intron
chr19	2,806,002	2,806,055	+	3.202	3.596	THOP1	ENSG00000172009.15	Distal intron
chr1	100,288,582	100,288,650	+	5.897	3.048	RTCA	ENSG00000137996.13	Distal intron
chr1	65,254,946	65,254,963	+	3.330	4.970	DNAJC6	ENSG00000116675.16	Proximal intron
chr22	41,905,307	41,905,352	+	6.227	5.180	SREBF2	ENSG00000198911.12	3' splice site
chr6	57,101,859	57,101,910	+	3.990	3.484	ZNF451	ENSG00000112200.17	CDS
chr7	1,482,160	1,482,226	-	4.349	3.374	INTS1	ENSG00000164880.16	Proximal intron
chrX	41,334,559	41,334,586	+	3.529	3.156	DDX3X	ENSG00000215301.11	Proximal intron
chr21	8,218,018	8,218,035	+	37.751	5.195	ENSG00000278996	ENSG00000278996.1	ncRNA
chr21	8,217,994	8,218,010	+	25.440	4.400	ENSG00000278996	ENSG00000278996.1	ncRNA
chr2	202,278,142	202,278,181	+	30.919	3.988	SNORD70B	ENSG00000212309.1	ncRNA
chr21	8,401,789	8,401,818	+	400.000	10.415	ENSG00000280441	ENSG00000280441.3	ncRNA
chr22	49,527,635	49,527,705	-	10.172	3.274	MIR3667HG	ENSG00000188511.14	ncRNA
chr18	36,139,472	36,139,513	+	4.025	3.741	ELP2	ENSG00000134759.14	CDS
chr7	128,697,475	128,697,483	+	20.720	3.303	RNA5SP242	ENSG00000201041.1	ncRNA
chr19	10,296,175	10,296,226	+	10.404	4.141	ICAM5	ENSG00000105376.5	Proximal intron
chr16	89,904,491	89,904,560	+	5.468	4.234	TCF25	ENSG00000141002.20	Proximal intron
chr11	62,527,380	62,527,440	-	11.524	3.024	AHNAK	ENSG00000124942.14	CDS
chr7	150,396,125	150,396,183	+	3.519	4.491	ZNF775	ENSG00000196456.13	Proximal intron
chr21	8,218,739	8,218,743	+	400.000	5.675	ENSG00000278996	ENSG00000278996.1	ncRNA
chr16	88,461,206	88,461,294	+	3.493	3.587	ZFPM1	ENSG00000179588.9	Distal intron
chr21	8,401,818	8,401,852	+	400.000	10.972	ENSG00000280441	ENSG00000280441.3	ncRNA
chr8	127,737,721	127,737,772	+	6.934	3.711	MYC	ENSG00000136997.21	5' splice site
chr19	28,541,909	28,541,969	-	13.951	3.194	ENSG00000266893\|ENSG00000283403	ENSG00000266893.1\|\|ENSG00000283403.1	ncRNA
chr12	132,550,226	132,550,271	+	4.025	4.241	FBRSL1	ENSG00000112787.14	Distal intron
chr19	12,676,791	12,676,849	-	3.519	4.622	DHPS	ENSG00000095059.17	Proximal intron
chr20	47,289,957	47,290,012	-	8.875	4.287	ZMYND8	ENSG00000101040.20	Proximal intron
chr1	117,367,964	117,368,034	+	3.032	3.245	MAN1A2	ENSG00000198162.12	5' UTR
chr16	68,142,683	68,142,761	+	4.566	4.131	NFATC3	ENSG00000072736.19	Distal intron
chr12	132,016,635	132,016,689	+	4.660	4.741	EP400	ENSG00000183495.15	Distal intron
chr11	770,432	770,483	-	4.422	3.421	GATD1	ENSG00000177225.17	3' UTR
chr5	53,884,310	53,884,359	-	5.934	4.230	ARL15	ENSG00000185305.12	3' UTR
chr16	47,292,620	47,292,681	-	3.330	4.330	ITFG1	ENSG00000129636.13	Distal intron
chr17	81,636,942	81,637,004	-	7.520	3.333	NPLOC4	ENSG00000182446.14	5' UTR
chr10	11,947,544	11,947,604	-	3.493	3.587	UPF2	ENSG00000151461.20	Distal intron
chr20	62,316,452	62,316,535	-	7.142	3.530	LAMA5	ENSG00000130702.15	Proximal intron
chr21	8,218,700	8,218,727	+	41.837	6.828	ENSG00000278996	ENSG00000278996.1	ncRNA
chr7	139,391,796	139,391,848	+	3.645	3.672	FMC1-LUC7L2\|LUC7L2	ENSG00000146963.18\|\|ENSG00000269955.2	Distal intron
chr5	139,293,903	139,293,960	+	5.751	3.274	MATR3	ENSG00000015479.20	5' UTR
chr8	140,525,264	140,525,333	-	3.032	3.245	AGO2	ENSG00000123908.12	3' UTR
chr4	896,026	896,102	-	17.375	3.005	GAK	ENSG00000178950.18	Proximal intron
chrX	138,963,226	138,963,297	-	5.237	5.564	FGF13	ENSG00000129682.16	Distal intron
chr4	129,067,951	129,068,065	-	5.006	4.006	SCLT1	ENSG00000151466.12	Distal intron
chr10	106,970,056	106,970,096	+	4.087	4.926	RNA5SP325	ENSG00000200626.1	ncRNA
chr16	96,171	96,260	-	3.645	3.937	NPRL3	ENSG00000103148.17	Distal intron
chr6	27,495,874	27,495,905	+	11.509	4.225	tRNA-Ser-AGA-2-3	tRNA-Ser-AGA-2-3	tRNA
chr16	89,588,298	89,588,320	+	3.202	3.511	CPNE7	ENSG00000178773.15	Proximal intron
chr16	88,969,991	88,970,031	-	3.202	3.965	CBFA2T3	ENSG00000129993.15	Distal intron
chr11	95,770,866	95,770,923	-	3.493	4.248	FAM76B	ENSG00000077458.13	3' UTR
chr2	152,664,137	152,664,165	-	3.990	3.484	PRPF40A	ENSG00000196504.21	CDS
chr10	50,618,846	50,618,899	-	5.817	5.352	SGMS1	ENSG00000198964.14	Distal intron
chr17	77,320,225	77,320,301	+	5.006	4.006	SEPTIN9	ENSG00000184640.20	5' UTR
chr10	68,755,182	68,755,240	+	22.567	3.219	SNORD98	ENSG00000283551.1	ncRNA
chr11	57,407,245	57,407,297	-	9.196	5.783	SLC43A3	ENSG00000134802.18	3' UTR
chr11	57,407,228	57,407,245	-	6.719	5.380	SLC43A3	ENSG00000134802.18	3' UTR
chr21	45,074,033	45,074,117	+	6.553	3.110	ADARB1	ENSG00000197381.17	ncRNA
chr21	8,401,780	8,401,784	+	118.023	7.652	ENSG00000280441	ENSG00000280441.3	ncRNA
chr17	76,561,658	76,561,693	+	17.820	5.826	SNORD1A\|SNHG16	ENSG00000278261.1\|\|ENSG00000163597.17	ncRNA
chr11	62,566,807	62,566,821	-	3.805	4.672	EEF1G	ENSG00000254772.10	CDS
chr17	81,691,636	81,691,682	+	3.805	4.596	HGS	ENSG00000185359.14	5' splice site
chr7	151,122,363	151,122,425	+	4.766	4.817	AGAP3	ENSG00000133612.19	Proximal intron
chrX	20,266,826	20,266,972	-	3.599	3.283	RPS6KA3	ENSG00000177189.14	5' UTR
chr7	100,574,052	100,574,109	-	5.126	3.204	LRCH4	ENSG00000077454.17	3' UTR
chr19	49,686,853	49,686,899	+	4.349	3.180	PRMT1	ENSG00000126457.22	Proximal intron
chr19	1,046,578	1,046,664	+	3.032	3.426	ABCA7	ENSG00000064687.13	Proximal intron
chr11	93,721,669	93,721,727	+	33.063	3.349	SCARNA9	ENSG00000254911.3	ncRNA
chr19	55,097,886	55,097,966	-	9.053	4.833	PPP1R12C	ENSG00000125503.13	Distal intron
chr16	31,493,090	31,493,125	-	3.202	3.741	RUSF1	ENSG00000140688.17	3' splice site
chr3	38,165,645	38,165,726	+	5.468	4.234	OXSR1	ENSG00000172939.9	5' UTR
chr3	38,165,551	38,165,645	+	8.977	3.103	OXSR1	ENSG00000172939.9	5' UTR
chr5	134,781,128	134,781,162	+	3.493	3.719	DDX46	ENSG00000145833.16	CDS
chr19	949,406	949,461	+	3.493	3.587	ARID3A	ENSG00000116017.11	Distal intron
chr11	763,896	763,961	+	5.622	3.423	TALDO1	ENSG00000177156.11	CDS
chr16	23,497,906	23,497,964	-	3.529	3.276	GGA2	ENSG00000103365.15	Distal intron
chr9	133,257,649	133,257,715	-	7.000	3.231	ABO	ENSG00000175164.16	Proximal intron
chr5	39,056,387	39,056,470	-	9.496	3.527	RICTOR	ENSG00000164327.13	Distal intron
chr3	9,478,016	9,478,063	+	5.074	4.037	SETD5	ENSG00000168137.20	3' UTR
chr7	149,589,086	149,589,111	-	5.126	3.169	tRNA-Cys-GCA-3-1	tRNA-Cys-GCA-3-1	tRNA
chr7	149,589,067	149,589,086	-	5.126	3.132	tRNA-Cys-GCA-3-1	tRNA-Cys-GCA-3-1	tRNA
chr1	206,732,891	206,732,943	+	3.529	3.156	MAPKAPK2	ENSG00000162889.11	3' UTR
chr11	991,779	991,833	+	3.529	3.156	AP2A2	ENSG00000183020.15	Distal intron
chr17	66,267,789	66,267,825	+	5.817	5.156	RNA5SP444	ENSG00000252653.1	ncRNA
chr5	146,497,350	146,497,404	+	6.138	4.122	TCERG1	ENSG00000113649.13	Distal intron
chr21	15,776,787	15,776,837	+	3.330	4.587	USP25	ENSG00000155313.16	Distal intron
chr1	89,925,193	89,925,247	+	3.202	3.672	LRRC8D	ENSG00000171492.14	Distal intron
chr17	82,487,915	82,487,940	+	4.814	3.115	NARF	ENSG00000141562.19	CDS
chr1	29,157,940	29,157,984	-	3.529	3.156	SRSF4	ENSG00000116350.18	Distal intron
chr22	21,417,945	21,418,011	+	4.552	3.524	HIC2	ENSG00000169635.10	Proximal intron
chr21	8,218,812	8,218,831	+	76.591	7.739	ENSG00000278996	ENSG00000278996.1	ncRNA
chr21	8,218,749	8,218,812	+	400.000	6.078	ENSG00000278996	ENSG00000278996.1	ncRNA
chr21	8,218,744	8,218,749	+	400.000	5.826	ENSG00000278996	ENSG00000278996.1	ncRNA
chr16	67,786,089	67,786,163	-	5.604	3.735	RANBP10	ENSG00000141084.12	Distal intron
chr20	5,571,659	5,571,713	-	4.158	3.126	GPCPD1	ENSG00000125772.14	Distal intron
chr16	67,029,216	67,029,305	+	3.032	3.071	CBFB	ENSG00000067955.15	5' UTR
chr17	78,120,556	78,120,640	-	7.983	3.611	TMC6	ENSG00000141524.19	5' splice site
chr7	121,168,047	121,168,093	+	3.032	3.465	CPED1	ENSG00000106034.18	Distal intron
chr3	183,745,044	183,745,105	+	4.025	3.965	YEATS2	ENSG00000163872.16	Distal intron
chr5	173,137,466	173,137,548	+	3.131	3.060	CREBRF	ENSG00000164463.12	3' UTR
chr22	21,644,179	21,644,271	+	19.639	3.202	SDF2L1	ENSG00000128228.5	3' UTR
chr3	196,055,913	196,055,976	-	5.228	3.064	TFRC	ENSG00000072274.14	Distal intron
chr4	183,240,622	183,240,681	+	3.519	5.060	WWC2	ENSG00000151718.16	Proximal intron
chr7	119,795,252	119,795,332	-	7.142	3.678	LINC02476	ENSG00000225546.6	ncRNA
chr3	182,808,332	182,808,381	+	6.986	5.400	ATP11B	ENSG00000058063.16	Distal intron
chr1	28,890,478	28,890,535	+	9.896	4.513	EPB41	ENSG00000159023.22	Distal intron
chr19	45,478,653	45,478,671	-	13.525	6.361	tRNA-SeC-TCA-1-1	tRNA-SeC-TCA-1-1	tRNA
chr2	71,423,689	71,423,738	+	5.112	4.241	ZNF638	ENSG00000075292.19	CDS
chr19	14,517,804	14,517,850	-	3.529	3.219	DNAJB1	ENSG00000132002.9	5' UTR
chr15	63,622,811	63,622,881	-	3.123	3.172	HERC1	ENSG00000103657.14	CDS
chr5	141,639,727	141,639,784	-	6.781	4.560	FCHSD1	ENSG00000197948.11	3' UTR
chr15	101,975,076	101,975,168	+	3.147	3.087	WASH3P	ENSG00000185596.16	ncRNA
chr9	120,773,960	120,774,031	-	6.400	5.172	FBXW2	ENSG00000119402.18	Distal intron
chr18	59,328,868	59,328,879	-	4.552	4.071	LMAN1	ENSG00000074695.6	3' UTR
chr18	59,328,903	59,328,912	-	3.228	3.219	LMAN1	ENSG00000074695.6	3' UTR
chr22	20,995,134	20,995,191	+	3.936	3.127	LZTR1	ENSG00000099949.22	Proximal intron
chr6	26,312,585	26,312,611	-	4.581	3.219	tRNA-Ser-TGA-3-1	tRNA-Ser-TGA-3-1	tRNA
chr16	89,294,078	89,294,133	-	3.565	3.232	ANKRD11	ENSG00000167522.17	Distal intron
chr6	110,814,631	110,814,701	-	10.115	3.524	CDK19	ENSG00000155111.15	Proximal intron
chr12	6,770,389	6,770,405	+	7.983	3.295	PTMS	ENSG00000159335.18	CDS
chr22	23,180,970	23,181,033	+	7.070	3.081	BCR	ENSG00000186716.21	CDS
chr6	110,815,254	110,815,319	-	7.824	4.674	CDK19	ENSG00000155111.15	5' UTR
chr1	20,742,850	20,742,890	-	7.379	3.884	HP1BP3	ENSG00000127483.19	3' UTR
chr20	47,261,290	47,261,362	-	3.131	3.156	ZMYND8	ENSG00000101040.20	Distal intron
chr16	1,699,275	1,699,320	+	4.422	3.776	JPT2	ENSG00000206053.13	3' UTR
chr1	21,936,510	21,936,530	-	11.697	6.333	HSPG2	ENSG00000142798.20	Distal intron
chr1	21,936,530	21,936,577	-	26.628	6.259	HSPG2	ENSG00000142798.20	Distal intron
chr7	44,796,850	44,796,931	+	3.093	3.021	PPIA	ENSG00000196262.15	5' splice site
chr1	51,359,510	51,359,563	-	4.859	3.537	EPS15	ENSG00000085832.17	Distal intron
chr9	130,736,148	130,736,223	+	14.292	3.112	ABL1	ENSG00000097007.19	Distal intron
chr6	31,954,552	31,954,637	-	3.529	3.330	NELFE	ENSG00000204356.14	CDS
chr7	150,370,157	150,370,220	+	4.284	4.748	REPIN1	ENSG00000214022.12	Proximal intron
chr5	36,241,720	36,241,781	-	8.698	5.594	NADK2	ENSG00000152620.13	CDS
chr22	19,942,459	19,942,500	+	4.025	3.915	COMT	ENSG00000093010.15	Distal intron
chr22	49,548,025	49,548,073	-	3.493	3.776	MIR3667HG	ENSG00000188511.14	ncRNA
chr15	45,587,445	45,587,516	+	13.206	6.307	BLOC1S6	ENSG00000104164.12	CDS
chr2	62,705,846	62,705,917	+	7.693	3.861	EHBP1	ENSG00000115504.15	5' UTR
chr17	44,051,729	44,051,783	-	5.074	3.587	LSM12	ENSG00000161654.10	Distal intron
chr8	123,182,777	123,182,879	+	4.395	3.143	FAM83A	ENSG00000147689.17	CDS
chr1	25,242,862	25,242,911	-	6.986	5.473	RSRP1	ENSG00000117616.18	Proximal intron
chr11	2,944,547	2,944,602	-	8.749	3.092	NAP1L4	ENSG00000205531.13	3' UTR
chr8	127,737,036	127,737,085	+	3.330	4.830	MYC	ENSG00000136997.21	Proximal intron
chr6	88,804,399	88,804,467	-	3.330	4.426	RNGTT	ENSG00000111880.16	Distal intron
chr19	18,910,134	18,910,182	-	3.493	3.656	COPE	ENSG00000105669.14	Distal intron
chr20	47,216,564	47,216,619	-	3.202	3.511	ZMYND8	ENSG00000101040.20	Distal intron
chr12	98,601,242	98,601,285	+	4.094	3.886	SLC25A3	ENSG00000075415.15	CDS
chr10	97,224,705	97,224,761	-	3.936	3.127	ARHGAP19	ENSG00000213390.11	3' UTR
chr1	41,169,461	41,169,522	-	3.123	3.011	SCMH1	ENSG00000010803.17	Distal intron
chr12	108,730,857	108,730,961	-	5.595	3.491	CORO1C	ENSG00000110880.11	Proximal intron
chr15	74,409,843	74,409,918	-	7.520	3.365	SEMA7A	ENSG00000138623.10	3' UTR
chr1	21,755,793	21,755,851	-	9.858	3.674	USP48	ENSG00000090686.16	Distal intron
chr17	64,505,968	64,506,025	-	6.781	4.652	DDX5	ENSG00000108654.16	5' splice site
chr17	39,461,527	39,461,552	+	3.519	4.734	CDK12	ENSG00000167258.15	5' UTR
chr12	31,983,210	31,983,261	+	5.664	4.219	RESF1	ENSG00000174718.12	CDS
chr5	78,175,185	78,175,252	-	3.954	3.052	AP3B1	ENSG00000132842.15	Proximal intron
chr2	169,806,162	169,806,207	+	5.085	3.361	SSB	ENSG00000138385.16	Proximal intron
chr15	90,201,615	90,201,666	+	5.817	5.241	SEMA4B	ENSG00000185033.15	CDS
chr5	38,968,990	38,969,049	-	7.824	4.711	RICTOR	ENSG00000164327.13	Distal intron
chr10	102,114,782	102,114,814	-	6.649	4.011	LDB1	ENSG00000198728.11	5' UTR
chr5	139,316,459	139,316,500	+	3.529	3.330	MATR3	ENSG00000280987.4\|\|ENSG00000015479.20	Proximal intron
chr2	43,916,703	43,916,782	-	4.422	3.484	LRPPRC	ENSG00000138095.20	Distal intron
chr14	75,604,232	75,604,252	+	22.812	4.034	RNA5SP387\|ENSG00000280494	ENSG00000201096.1\|\|ENSG00000280494.2	ncRNA
chr14	75,604,204	75,604,232	+	22.150	3.882	RNA5SP387\|ENSG00000280494	ENSG00000201096.1\|\|ENSG00000280494.2	ncRNA
chr1	26,720,986	26,721,041	+	3.645	3.880	ARID1A	ENSG00000117713.21	Distal intron
chr20	49,280,376	49,280,392	+	77.268	3.461	ZFAS1\|SNORD12B	ENSG00000222365.1\|\|ENSG00000177410.13	ncRNA
chr1	47,219,530	47,219,594	-	4.380	3.134	TAL1	ENSG00000162367.12	3' UTR
chr19	938,027	938,091	+	4.581	3.304	ARID3A	ENSG00000116017.11	Distal intron
chr21	8,210,741	8,210,803	+	51.029	8.040	ENSG00000278996	ENSG00000278996.1	ncRNA
chrX	47,142,416	47,142,441	-	6.874	4.514	NDUFB11	ENSG00000147123.12	CDS
chr19	45,670,872	45,670,959	+	5.085	3.569	GIPR	ENSG00000010310.9	Proximal intron
chr4	78,854,587	78,854,643	+	13.110	5.391	BMP2K	ENSG00000138756.19	Distal intron
chr8	143,805,706	143,805,753	-	5.237	5.087	SCRIB	ENSG00000180900.20	Proximal intron
chr11	62,517,353	62,517,451	-	22.311	3.893	AHNAK	ENSG00000124942.14	CDS
chr11	62,517,451	62,517,523	-	22.552	3.364	AHNAK	ENSG00000124942.14	CDS
chr11	404,743	404,876	+	4.638	3.358	PKP3	ENSG00000184363.10	3' UTR
chr3	33,096,363	33,096,448	-	3.032	3.295	GLB1\|TMPPE	ENSG00000188167.9\|\|ENSG00000170266.16	Proximal intron
chr14	90,397,919	90,397,997	+	4.094	3.817	CALM1	ENSG00000198668.14	5' splice site
chr16	89,696,203	89,696,263	+	3.202	3.511	CDK10	ENSG00000185324.22	3' UTR
chr14	103,521,464	103,521,495	-	4.094	3.948	CKB	ENSG00000166165.14	3' splice site
chr2	96,859,890	96,859,991	-	10.296	3.009	SEMA4C	ENSG00000168758.11	3' UTR
chr7	1,483,097	1,483,147	-	4.548	4.011	INTS1	ENSG00000164880.16	Proximal intron
chr19	2,342,246	2,342,298	+	5.112	4.060	SPPL2B	ENSG00000005206.17	3' UTR
chrX	153,932,168	153,932,278	-	6.211	3.389	NAA10	ENSG00000102030.16	5' splice site
chr22	19,104,972	19,105,053	-	4.094	3.948	DGCR2	ENSG00000070413.20	Distal intron
chr21	44,319,729	44,319,768	+	5.112	4.560	PFKL	ENSG00000141959.17	Proximal intron
chr22	49,640,735	49,640,784	-	4.552	3.571	MIR3667HG	ENSG00000188511.14	ncRNA
chr13	112,554,913	112,555,011	-	3.493	3.587	TUBGCP3	ENSG00000126216.15	CDS
chr16	88,652,122	88,652,184	-	8.363	3.165	MVD	ENSG00000167508.12	3' UTR
chr16	1,771,153	1,771,247	-	9.896	4.541	NME3	ENSG00000103024.8	CDS
chr1	235,110,741	235,110,788	-	11.362	5.241	TOMM20	ENSG00000173726.11	3' UTR
chr8	1,824,010	1,824,184	+	4.087	4.830	ARHGEF10	ENSG00000104728.16	5' UTR
chr10	101,814,247	101,814,292	-	8.228	3.511	OGA	ENSG00000198408.14	Distal intron
chr7	1,488,460	1,488,541	-	4.548	4.011	INTS1	ENSG00000164880.16	Distal intron
chr12	111,578,795	111,578,873	-	5.595	3.374	ATXN2	ENSG00000204842.18	Distal intron
chr11	47,164,958	47,165,002	-	4.660	4.741	ARFGAP2	ENSG00000149182.15	3' UTR
chrX	44,933,762	44,933,843	+	7.770	4.177	KDM6A	ENSG00000147050.17	Distal intron
chr3	152,839,299	152,839,359	+	3.493	3.880	P2RY1	ENSG00000169860.7	3' UTR
chr9	130,771,948	130,772,010	+	5.126	3.169	ABL1	ENSG00000097007.19	Distal intron
chr22	38,293,640	38,293,711	-	3.565	3.232	CSNK1E\|TPTEP2-CSNK1E	ENSG00000283900.1\|\|ENSG00000213923.13	Proximal intron
chr21	44,314,609	44,314,672	+	9.856	4.200	PFKL	ENSG00000141959.17	Distal intron
chr16	21,512,049	21,512,099	-	4.548	4.172	SMG1P3	ENSG00000180747.15	ncRNA
chr16	551,123	551,166	+	3.529	3.219	CAPN15	ENSG00000103326.12	Proximal intron
chr22	23,273,819	23,273,881	+	3.032	3.295	BCR	ENSG00000186716.21	5' splice site
chr9	131,228,199	131,228,253	+	16.618	5.692	NUP214	ENSG00000126883.19	CDS
chr2	172,585,506	172,585,566	+	3.147	3.087	PDK1	ENSG00000152256.14	Distal intron
chr6	31,829,817	31,829,874	+	10.819	3.178	HSPA1B	ENSG00000204388.7	CDS
chr11	16,842,264	16,842,315	+	5.251	5.219	RN7SKP90	ENSG00000199883.1	ncRNA
chr6	15,496,527	15,496,579	+	4.395	3.011	JARID2	ENSG00000008083.14	CDS
chr12	56,104,646	56,104,731	+	3.954	3.008	PA2G4	ENSG00000170515.14	5' UTR
chr17	76,561,135	76,561,174	+	15.105	3.601	SNORD1B	ENSG00000199961.1	ncRNA
chr2	20,325,651	20,325,697	-	4.087	4.656	PUM2	ENSG00000055917.16	Distal intron
chrX	47,203,645	47,203,692	+	3.565	3.232	UBA1	ENSG00000130985.17	CDS
chr14	102,086,916	102,086,941	-	10.819	3.482	HSP90AA1	ENSG00000080824.19	5' splice site
chr11	62,527,754	62,527,814	-	20.291	4.098	AHNAK	ENSG00000124942.14	CDS
chr22	21,695,676	21,695,729	+	5.300	4.056	PPIL2	ENSG00000100023.20	3' UTR
chr12	13,046,135	13,046,228	+	40.714	3.837	FAM234B	ENSG00000084444.14	Distal intron
chr19	10,291,139	10,291,194	+	9.628	4.872	ICAM5	ENSG00000105376.5	CDS
chr11	17,077,240	17,077,246	-	4.638	3.358	RPS13	ENSG00000110700.7	CDS
chr17	43,290,292	43,290,353	-	4.566	4.041	U2	ENSG00000274452.1	ncRNA
chr9	136,835,462	136,835,523	+	7.520	3.425	RABL6	ENSG00000196642.19	Proximal intron
chr1	28,205,315	28,205,350	-	3.936	3.127	DNAJC8	ENSG00000126698.11	CDS
chr7	5,045,901	5,045,971	+	4.552	3.475	RBAK\|RBAK-RBAKDN	ENSG00000146587.18\|\|ENSG00000272968.5	5' UTR
chr4	103,141,895	103,141,909	-	4.025	3.915	CENPE	ENSG00000138778.14	CDS
chr13	27,255,083	27,255,115	+	10.437	3.250	SNORD102	ENSG00000207500.1	ncRNA
chr1	213,136,891	213,136,961	+	4.036	3.456	RPS6KC1	ENSG00000136643.12	Distal intron
chr17	2,330,912	2,331,021	-	4.036	3.352	TSR1	ENSG00000167721.11	CDS
chr17	75,035,136	75,035,196	+	3.554	3.001	tRNA-Arg-TCG-3-1	tRNA-Arg-TCG-3-1	tRNA
chr17	60,242,428	60,242,484	-	7.345	4.730	USP32	ENSG00000170832.13	Distal intron
chr16	27,486,080	27,486,153	-	3.032	3.245	GTF3C1	ENSG00000077235.18	CDS
chr19	49,104,969	49,105,006	+	4.422	3.645	SNRNP70	ENSG00000104852.15	Proximal intron
chr17	8,513,878	8,513,895	-	4.025	3.741	MYH10	ENSG00000133026.14	CDS
chr3	197,884,458	197,884,514	+	5.664	4.343	LRCH3	ENSG00000186001.14	3' UTR
chr12	62,515,197	62,515,247	+	3.202	3.596	MON2	ENSG00000061987.16	Distal intron
chr21	8,397,871	8,397,981	+	9.896	4.393	ENSG00000280441	ENSG00000280441.3	ncRNA
chr17	82,058,679	82,058,756	-	8.977	3.040	DUS1L	ENSG00000169718.18	CDS
chr12	6,753,062	6,753,111	-	3.330	4.330	MLF2	ENSG00000089693.11	5' UTR
chr17	82,850,234	82,850,358	+	5.595	3.830	TBCD	ENSG00000141556.22	Distal intron
chr3	15,813,125	15,813,183	-	3.032	3.663	ANKRD28	ENSG00000206560.12	Distal intron
chr5	177,310,679	177,310,754	-	4.085	3.109	MXD3	ENSG00000213347.11	CDS
chr22	20,820,549	20,820,594	-	4.087	4.587	PI4KA	ENSG00000241973.11	CDS
chr16	3,024,106	3,024,194	+	3.936	3.320	THOC6	ENSG00000131652.14	5' UTR
chr10	124,418,710	124,418,773	-	4.581	3.448	OAT	ENSG00000065154.12	5' splice site
chr14	102,050,741	102,050,758	+	4.859	3.537	DYNC1H1	ENSG00000197102.14	3' UTR
chr2	113,741,460	113,741,528	-	6.138	3.869	SLC35F5	ENSG00000115084.15	Distal intron
chr17	19,062,086	19,062,138	+	54.917	8.317	SNORD3B-1	ENSG00000265185.6	ncRNA
chr3	33,664,850	33,664,918	-	6.976	3.397	CLASP2	ENSG00000163539.18	Distal intron
chr7	119,796,925	119,796,988	-	7.906	3.102	LINC02476	ENSG00000225546.6	ncRNA
chr20	5,571,994	5,572,041	-	5.251	5.011	GPCPD1	ENSG00000125772.14	Distal intron
chr16	88,889,641	88,889,711	-	3.645	3.880	CBFA2T3	ENSG00000129993.15	Distal intron
chr7	150,953,323	150,953,380	-	4.085	3.241	KCNH2	ENSG00000055118.17	Proximal intron
chr10	74,014,870	74,014,955	+	4.395	3.011	VCL	ENSG00000035403.18	Distal intron
chr7	77,537,281	77,537,335	+	7.060	3.448	PTPN12	ENSG00000127947.16	5' UTR
chr21	45,492,844	45,492,951	+	4.814	3.115	COL18A1	ENSG00000182871.16	Proximal intron
chr11	62,518,490	62,518,540	-	11.878	3.406	AHNAK	ENSG00000124942.14	CDS
chr17	28,722,611	28,722,637	+	17.854	3.719	SNORD4A	ENSG00000238578.1	ncRNA
chr1	77,960,389	77,960,397	-	7.222	4.318	FUBP1	ENSG00000162613.17	CDS
chr1	77,960,397	77,960,433	-	8.768	4.152	FUBP1	ENSG00000162613.17	CDS
chr7	76,553,920	76,553,995	+	3.519	4.622	LINC03009	ENSG00000205485.13	ncRNA
chr12	131,902,165	131,902,229	+	3.493	3.587	ULK1	ENSG00000177169.10	Distal intron
chr9	128,636,042	128,636,102	-	3.032	3.341	DYNC2I2	ENSG00000119333.12	Proximal intron
chr11	118,768,773	118,768,826	-	13.963	4.210	DDX6	ENSG00000110367.14	Proximal intron
chr11	118,768,826	118,768,832	-	12.670	3.999	DDX6	ENSG00000110367.14	Proximal intron
chr14	105,399,486	105,399,541	+	3.519	4.622	TEX22	ENSG00000226174.7	CDS
chr14	103,521,581	103,521,683	-	6.400	5.569	CKB	ENSG00000166165.14	Proximal intron
chr3	151,188,160	151,188,181	+	19.639	3.344	RNA5SP145	ENSG00000199994.1	ncRNA
chr19	21,445,977	21,446,004	-	3.493	3.776	ENSG00000268119	ENSG00000268119.8	ncRNA
chr1	10,419,980	10,420,052	+	26.753	4.187	PGD	ENSG00000142657.21	3' UTR
chr16	69,742,154	69,742,216	-	5.074	3.795	NOB1	ENSG00000141101.13	3' UTR
chr2	167,891,429	167,891,470	-	5.604	3.953	B3GALT1-AS1	ENSG00000235335.3	ncRNA
chr17	45,150,368	45,150,407	+	4.581	3.262	HEXIM1	ENSG00000186834.4	3' UTR
chr7	128,078,207	128,078,275	+	3.519	4.560	SND1	ENSG00000197157.11	Distal intron
chr19	58,394,521	58,394,545	+	9.993	4.466	RPS5	ENSG00000083845.9	CDS
chr19	58,394,498	58,394,521	+	11.760	3.691	RPS5	ENSG00000083845.9	CDS
chr6	10,904,628	10,904,690	+	4.552	3.524	SYCP2L	ENSG00000153157.13	Distal intron
chr2	224,524,208	224,524,272	-	5.237	5.087	CUL3	ENSG00000036257.14	Distal intron
chr1	86,914,707	86,914,873	+	8.921	3.085	HS2ST1	ENSG00000153936.18	5' UTR
chr1	15,932,538	15,932,560	+	4.581	3.262	SPEN	ENSG00000065526.12	CDS
chr11	75,405,298	75,405,323	+	4.284	4.748	RPS3	ENSG00000149273.15	3' UTR
chr14	23,321,925	23,321,970	+	3.954	3.437	PABPN1	ENSG00000100836.11	5' UTR
chr17	17,816,147	17,816,188	-	4.422	3.645	SREBF1	ENSG00000072310.18	5' splice site
chr17	64,503,815	64,503,870	-	8.238	3.343	DDX5	ENSG00000108654.16	CDS
chr16	3,192,027	3,192,074	+	4.566	4.465	tRNA-Pro-AGG-1-1	tRNA-Pro-AGG-1-1	tRNA
chr19	48,852,880	48,852,944	-	3.519	4.491	PLEKHA4	ENSG00000105559.12	Distal intron
chr21	37,388,277	37,388,336	+	20.533	4.519	DYRK1A	ENSG00000157540.22	Distal intron
chr12	121,310,277	121,310,345	-	5.006	4.069	ANAPC5	ENSG00000089053.13	Proximal intron
chr5	141,319,521	141,319,577	-	7.000	3.077	TAF7	ENSG00000178913.9	CDS
chr16	67,229,430	67,229,488	-	3.032	3.191	FHOD1	ENSG00000135723.14	3' UTR
chr2	202,291,353	202,291,422	+	23.668	3.524	SNORD11B	ENSG00000271852.1	ncRNA
chr14	102,040,291	102,040,317	+	5.074	3.677	DYNC1H1	ENSG00000197102.14	CDS
chr1	12,277,803	12,277,863	+	5.300	3.645	VPS13D	ENSG00000048707.15	CDS
chr20	30,723,871	30,723,930	-	15.738	4.782	ANKRD20A21P	ENSG00000277112.3	ncRNA
chr20	30,723,835	30,723,871	-	3.032	3.002	ANKRD20A21P	ENSG00000277112.3	ncRNA
chr16	407,274	407,344	+	3.330	5.219	DECR2	ENSG00000242612.7	3' splice site
chr21	34,097,294	34,097,343	+	4.768	3.230	SLC5A3	ENSG00000198743.7	CDS
chr8	144,394,913	144,394,984	-	6.976	3.334	CPSF1	ENSG00000071894.17	CDS
chr16	8,854,961	8,855,017	-	3.529	3.156	CARHSP1	ENSG00000153048.11	3' UTR
chr14	88,577,008	88,577,057	+	3.519	4.415	ZC3H14	ENSG00000100722.20	Distal intron
chr19	893,560	893,589	+	11.366	3.485	RNU6-9	ENSG00000207507.1	ncRNA
chr7	139,291,802	139,291,852	+	3.330	4.511	UBN2	ENSG00000157741.15	Distal intron
chr20	62,134,677	62,134,747	+	3.990	3.363	LSM14B	ENSG00000149657.20	3' UTR
chr19	47,229,771	47,229,794	-	3.032	3.385	BBC3	ENSG00000105327.18	Distal intron
chr9	33,934,297	33,934,360	-	16.987	3.573	SNORD121B	ENSG00000238300.1	ncRNA
chr17	46,129,926	46,130,023	-	4.581	3.304	KANSL1	ENSG00000120071.15	Distal intron
chr7	158,771,685	158,771,755	-	11.283	3.669	ESYT2	ENSG00000117868.18	Distal intron
chr19	45,478,596	45,478,618	-	400.000	6.204	tRNA-SeC-TCA-1-1	tRNA-SeC-TCA-1-1	tRNA
chr3	152,326,813	152,326,860	+	4.713	3.067	MBNL1	ENSG00000152601.18	Distal intron
chr11	33,257,729	33,257,860	+	3.202	3.804	HIPK3	ENSG00000110422.12	5' UTR
chr12	104,125,239	104,125,260	+	37.983	4.053	RNA5SP370	ENSG00000199415.1	ncRNA
chr12	104,125,260	104,125,297	+	48.361	3.858	RNA5SP370	ENSG00000199415.1	ncRNA
chr12	104,125,297	104,125,310	+	10.135	3.219	RNA5SP370	ENSG00000199415.1	ncRNA
chr6	85,677,591	85,677,660	-	18.253	3.736	SNORD50B\|SNHG5	ENSG00000275072.1\|\|ENSG00000203875.13	ncRNA
chr12	132,803,348	132,803,402	-	4.036	3.663	GOLGA3	ENSG00000090615.16	Distal intron
chr3	39,411,052	39,411,081	+	6.678	4.145	SNORA62	ENSG00000202363.1	ncRNA
chr7	112,451,006	112,451,064	+	3.202	3.511	IFRD1	ENSG00000006652.15	5' UTR
chr1	183,627,502	183,627,567	-	7.348	4.511	ARPC5	ENSG00000162704.16	CDS
chr9	128,703,505	128,703,549	+	3.645	3.817	PKN3	ENSG00000160447.7	Distal intron
chr4	163,124,119	163,124,135	-	15.438	4.656	NAF1	ENSG00000145414.9	Distal intron
chr4	163,124,135	163,124,165	-	18.682	4.410	NAF1	ENSG00000145414.9	Distal intron
chr7	100,357,374	100,357,429	+	4.422	3.484	PILRB	ENSG00000121716.21	5' UTR
chr11	62,523,672	62,523,701	-	9.204	3.177	AHNAK	ENSG00000124942.14	CDS
chr19	40,242,551	40,242,610	-	4.422	3.595	AKT2	ENSG00000105221.18	CDS
chr16	23,854,598	23,854,643	+	3.519	4.783	PRKCB	ENSG00000166501.14	Distal intron
chr3	196,354,609	196,354,668	-	7.912	4.688	UBXN7	ENSG00000163960.12	3' UTR
chr11	70,408,039	70,408,093	+	4.284	4.937	CTTN	ENSG00000085733.16	Proximal intron
chr6	4,777,171	4,777,253	+	7.824	4.635	CDYL	ENSG00000153046.18	Proximal intron
chr16	727,217	727,333	+	5.074	3.634	HAGHL	ENSG00000103253.19	5' UTR
chr2	47,798,640	47,798,707	+	8.557	3.558	MSH6	ENSG00000116062.19	CDS
chr16	70,529,504	70,529,587	+	19.054	3.216	SNORD111B	ENSG00000221514.1	ncRNA
chr16	89,694,082	89,694,144	+	6.976	3.426	CDK10	ENSG00000185324.22	3' splice site
chr1	16,622,401	16,622,446	-	3.645	3.672	CROCCP2	ENSG00000215908.11	ncRNA
chr3	195,908,784	195,908,841	-	4.548	4.122	ENSG00000289747	ENSG00000289747.1	CDS
chr12	123,497,254	123,497,304	-	4.087	4.656	RILPL1	ENSG00000188026.13	Distal intron
chr19	1,412,516	1,412,528	+	3.202	3.741	DAZAP1	ENSG00000071626.17	Distal intron
chr9	33,952,774	33,952,836	-	3.529	3.748	SNORD121A	ENSG00000238886.1	ncRNA
chr17	42,700,951	42,701,013	-	4.768	3.283	EZH1	ENSG00000108799.13	3' UTR
chr1	108,943,552	108,943,609	-	3.202	3.596	CLCC1	ENSG00000121940.17	CDS
chr17	8,226,612	8,226,627	-	3.530	3.622	tRNA-Ser-AGA-2-6	tRNA-Ser-AGA-2-6	tRNA
chr17	8,226,600	8,226,612	-	3.530	3.609	tRNA-Ser-AGA-2-6	tRNA-Ser-AGA-2-6	tRNA
chr17	8,226,627	8,226,642	-	3.131	3.317	tRNA-Ser-AGA-2-6	tRNA-Ser-AGA-2-6	tRNA
chr5	134,690,494	134,690,568	+	6.781	4.454	SEC24A	ENSG00000113615.13	Distal intron
chr12	49,272,932	49,272,985	+	5.006	4.473	TUBA1C	ENSG00000167553.17	CDS
chr17	82,094,561	82,094,579	-	4.566	4.131	FASN	ENSG00000169710.9	Distal intron
chr1	30,968,167	30,968,231	-	22.472	4.555	PUM1	ENSG00000134644.16	Proximal intron
chr22	20,554,331	20,554,386	+	6.781	4.622	MED15	ENSG00000099917.17	Distal intron
chr13	98,019,712	98,019,778	+	4.581	3.172	IPO5	ENSG00000065150.21	CDS
chr6	149,584,855	149,584,918	+	3.519	4.954	GINM1	ENSG00000055211.14	Distal intron
chr17	16,441,784	16,441,818	+	49.681	3.541	SNHG29	ENSG00000175061.20	ncRNA
chr10	73,065,037	73,065,081	-	9.628	4.954	P4HA1	ENSG00000122884.13	Distal intron
chrM	12,166	12,178	+	400.000	3.205	MT-TH	ENSG00000210176.1	ncRNA
chrM	12,178	12,208	+	400.000	3.053	MT-TH\|MT-TS2	ENSG00000210184.1\|\|ENSG00000210176.1	ncRNA
chr11	66,617,156	66,617,232	+	9.534	3.148	RBM14\|RBM14-RBM4	ENSG00000248643.5\|\|ENSG00000239306.5	5' splice site
chr11	67,398,303	67,398,392	-	3.529	3.380	PPP1CA	ENSG00000172531.16	3' UTR
chr20	2,463,761	2,463,791	-	3.032	3.191	SNRPB	ENSG00000125835.20	CDS
chr5	140,726,227	140,726,244	+	400.000	5.544	VTRNA1-3	ENSG00000202515.1	ncRNA
chr5	140,726,212	140,726,227	+	400.000	4.915	VTRNA1-3	ENSG00000202515.1	ncRNA
chr11	62,517,848	62,517,884	-	12.631	3.581	AHNAK	ENSG00000124942.14	CDS
chr1	226,976,407	226,976,483	+	4.025	3.915	COQ8A	ENSG00000163050.18	Distal intron
chrX	16,167,727	16,167,792	-	6.138	3.906	ENSG00000238178	ENSG00000238178.7	ncRNA
chr17	48,933,504	48,933,564	-	3.147	3.087	SNF8	ENSG00000159210.10	Proximal intron
chr22	40,409,151	40,409,229	+	6.138	3.975	ENSG00000284431	ENSG00000284431.1	ncRNA
chr16	19,709,965	19,710,039	-	3.529	3.156	KNOP1	ENSG00000103550.14	Proximal intron
chr16	12,136,057	12,136,120	+	3.330	4.656	SNX29	ENSG00000048471.14	Distal intron
chr17	58,331,707	58,331,786	-	54.680	3.014	hsa-mir-142	MI0000458	miRNA
chr2	202,276,459	202,276,500	+	20.743	4.704	SNORD70	ENSG00000212534.1	ncRNA
chr1	40,993,531	40,993,592	+	5.006	4.006	CTPS1	ENSG00000171793.17	Distal intron
chr11	61,321,663	61,321,698	-	3.529	3.156	DDB1	ENSG00000167986.15	CDS
chrM	612	645	+	50.298	3.380	MT-TF	ENSG00000210049.1	ncRNA
chr7	101,089,298	101,089,365	+	3.529	3.330	TRIM56	ENSG00000169871.13	CDS
chr8	143,927,093	143,927,131	-	3.529	3.156	PLEC	ENSG00000178209.17	3' splice site
chr1	149,885,669	149,885,709	-	4.552	3.571	H2BC21	ENSG00000184678.11	3' UTR
chr10	926,803	926,857	-	4.025	3.741	LARP4B	ENSG00000107929.16	Distal intron
chr11	62,517,218	62,517,260	-	13.863	3.300	AHNAK	ENSG00000124942.14	CDS
chr1	202,185,781	202,185,838	+	3.990	3.295	PTPRVP	ENSG00000243323.7	ncRNA
chrX	154,356,129	154,356,200	-	7.070	3.108	FLNA	ENSG00000196924.19	Distal intron
chr17	44,199,891	44,199,977	-	4.548	4.011	ATXN7L3	ENSG00000087152.16	ncRNA
chr1	33,012,667	33,012,721	-	18.831	4.016	AK2	ENSG00000004455.18	3' UTR
chr20	1,184,883	1,184,918	-	3.032	3.502	TMEM74B	ENSG00000125895.6	5' UTR
chr8	144,466,140	144,466,193	+	3.330	4.719	KIFC2	ENSG00000167702.13	ncRNA
chr11	27,472,614	27,472,719	-	5.738	5.006	LGR4	ENSG00000205213.14	5' UTR
chr7	48,632,755	48,632,800	+	3.805	4.804	ABCA13	ENSG00000179869.15	Distal intron
chr17	7,507,917	7,507,975	+	9.694	5.944	POLR2A	ENSG00000181222.19	Proximal intron
chr4	165,342,813	165,342,881	+	31.453	5.246	MSMO1	ENSG00000052802.13	3' UTR
chr1	167,955,938	167,956,015	+	4.660	5.304	DCAF6	ENSG00000143164.16	Distal intron
chr19	1,011,188	1,011,288	-	15.145	3.672	TMEM259	ENSG00000182087.14	CDS
chr17	28,720,600	28,720,616	+	74.196	4.004	RPL23A	ENSG00000198242.14	5' UTR
chr17	28,720,580	28,720,600	+	82.522	3.917	RPL23A	ENSG00000198242.14	5' UTR
chr17	28,720,564	28,720,580	+	76.886	3.893	RPL23A	ENSG00000198242.14	5' UTR
chr17	28,720,547	28,720,564	+	10.777	3.510	SNORD42B	ENSG00000238423.1	ncRNA
chr9	37,258,706	37,258,754	+	14.214	6.230	ZCCHC7	ENSG00000147905.18	Distal intron
chr9	137,185,474	137,185,579	-	4.085	3.109	ANAPC2	ENSG00000176248.9	Proximal intron
chr3	53,238,858	53,238,902	-	7.706	5.423	TKT	ENSG00000163931.17	Distal intron
chr22	19,980,448	19,980,498	-	4.552	3.615	ARVCF	ENSG00000099889.14	Proximal intron
chr17	79,838,817	79,838,881	-	7.013	3.385	CBX4	ENSG00000141582.15	Proximal intron
chr16	88,961,345	88,961,451	-	6.055	3.465	CBFA2T3	ENSG00000129993.15	Distal intron
chr5	141,319,942	141,319,990	-	5.295	3.101	TAF7	ENSG00000178913.9	CDS
chr11	2,982,590	2,982,634	-	6.221	4.538	NAP1L4	ENSG00000205531.13	Distal intron
chr1	19,117,842	19,117,886	-	5.751	3.233	UBR4	ENSG00000127481.15	CDS
chr22	21,445,996	21,446,077	+	10.821	3.005	HIC2	ENSG00000169635.10	CDS
chr12	28,505,422	28,505,478	+	3.936	3.127	RNA5SP355	ENSG00000202187.1	ncRNA
chr2	177,264,452	177,264,541	-	4.859	3.537	NFE2L2	ENSG00000116044.17	CDS
chr2	239,984,805	239,984,916	-	5.468	4.234	NDUFA10	ENSG00000130414.13	Distal intron
chr4	150,851,901	150,851,965	-	3.565	3.475	LRBA	ENSG00000198589.15	CDS
chr6	32,973,905	32,973,962	+	23.771	6.056	BRD2	ENSG00000204256.14	Proximal intron
chr3	5,132,082	5,132,159	+	6.138	4.122	ARL8B	ENSG00000134108.14	Distal intron
chr12	110,299,800	110,299,881	+	3.123	3.135	ATP2A2	ENSG00000174437.18	Distal intron
chr10	60,778,819	60,778,857	+	3.529	3.156	CDK1	ENSG00000170312.17	Proximal intron
chr1	244,863,374	244,863,380	-	13.237	3.532	HNRNPU	ENSG00000153187.20	Proximal intron
chr11	93,730,817	93,730,843	-	8.163	5.757	TAF1D	ENSG00000166012.17	ncRNA
chr5	10,366,124	10,366,181	+	3.519	4.622	MARCHF6	ENSG00000145495.16	Distal intron
chr20	35,006,127	35,006,180	-	4.025	3.804	TRPC4AP	ENSG00000100991.12	Proximal intron
chr11	65,442,203	65,442,214	+	22.083	3.189	NEAT1	ENSG00000245532.11	ncRNA
chr4	17,810,324	17,810,402	-	3.990	3.363	DCAF16	ENSG00000163257.11	5' splice site
chr19	57,856,028	57,856,092	+	3.147	3.352	ZNF587\|ENSG00000268750	ENSG00000268750.7\|\|ENSG00000198466.12	3' splice site
chr6	27,139,344	27,139,410	+	3.147	3.087	H4C9	ENSG00000276180.2	CDS
chr3	37,325,892	37,325,931	+	8.977	3.083	GOLGA4	ENSG00000144674.18	CDS
chr14	89,712,573	89,712,652	+	15.851	3.608	RN7SKP255	ENSG00000200312.1	ncRNA
chr1	228,148,790	228,148,832	+	6.138	4.095	GUK1	ENSG00000143774.17	CDS
chr22	38,506,239	38,506,298	-	9.485	3.441	DDX17	ENSG00000100201.23	5' UTR
chr18	73,249,152	73,249,335	-	10.044	3.233	LINC02864	ENSG00000263711.6	ncRNA
chr2	27,355,585	27,355,636	-	3.645	4.041	GTF3C2	ENSG00000115207.15	Proximal intron
chr17	82,037,135	82,037,183	-	3.123	3.011	DCXR	ENSG00000169738.8	Proximal intron
chr3	17,618,841	17,618,893	-	3.330	4.587	TBC1D5	ENSG00000131374.15	Distal intron
chrM	4,291	4,331	+	30.673	3.661	MT-TI	ENSG00000210100.1	ncRNA
chr1	52,416,702	52,416,754	+	3.936	3.127	PRPF38A	ENSG00000134748.13	3' UTR
chr6	4,852,979	4,853,044	+	4.085	3.418	CDYL	ENSG00000153046.18	Distal intron
chr1	1,478,474	1,478,521	+	4.548	4.011	ATAD3B	ENSG00000160072.20	Proximal intron
chr1	45,616,333	45,616,394	+	13.007	3.060	NASP	ENSG00000132780.17	CDS
chr17	28,861,192	28,861,259	-	4.768	3.730	hsa-mir-144\|hsa-mir-451a\|hsa-mir-4732	MI0001729\|\|MI0017369\|\|MI0000460	miRNA
chr19	6,739,709	6,739,784	+	6.211	3.458	TRIP10	ENSG00000125733.18	CDS
chr21	8,401,784	8,401,789	+	400.000	9.153	ENSG00000280441	ENSG00000280441.3	ncRNA
chr19	58,387,280	58,387,344	+	7.162	3.732	RPS5	ENSG00000083845.9	5' UTR
chr14	106,636,735	106,636,743	+	8.754	5.804	RNA5SP389	ENSG00000199480.1	ncRNA
chr14	106,636,677	106,636,735	+	46.920	4.194	RNA5SP389	ENSG00000199480.1	ncRNA
chr11	62,516,827	62,516,907	-	19.510	3.120	AHNAK	ENSG00000124942.14	CDS
chr16	30,988,695	30,988,791	+	4.566	3.937	HSD3B7	ENSG00000099377.14	3' UTR
chr12	55,728,626	55,728,711	-	5.085	3.538	CD63	ENSG00000135404.12	5' UTR
chr9	99,105,617	99,105,671	+	3.805	4.741	TGFBR1	ENSG00000106799.14	Proximal intron
chr3	196,503,481	196,503,531	-	3.565	3.363	RNF168	ENSG00000163961.4	5' UTR
chr11	57,333,085	57,333,128	-	4.660	4.741	SSRP1	ENSG00000149136.9	CDS
chr6	63,662,074	63,662,102	+	5.237	4.991	PHF3	ENSG00000118482.12	Distal intron
chr6	63,662,102	63,662,122	+	5.237	4.937	PHF3	ENSG00000118482.12	Distal intron
chr20	32,008,380	32,008,405	+	25.865	4.782	RNA5SP481	ENSG00000252623.1	ncRNA
chr20	32,008,405	32,008,422	+	25.865	4.782	RNA5SP481	ENSG00000252623.1	ncRNA
chr1	15,733,046	15,733,095	+	3.032	3.134	PLEKHM2	ENSG00000116786.13	Proximal intron
chr11	206,229	206,274	-	3.805	4.511	BET1L	ENSG00000177951.18	Proximal intron
chr20	35,478,021	35,478,102	+	3.529	3.219	CEP250	ENSG00000126001.16	CDS
chr3	45,689,012	45,689,030	-	400.000	4.398	tRNA-Arg-ACG-2-1	tRNA-Arg-ACG-2-1	tRNA
chr3	45,688,998	45,689,012	-	400.000	4.394	tRNA-Arg-ACG-2-1	tRNA-Arg-ACG-2-1	tRNA
chr1	36,323,752	36,323,832	+	3.493	3.830	SH3D21	ENSG00000214193.11	3' UTR
chr21	21,180,036	21,180,121	+	10.716	5.041	NCAM2	ENSG00000154654.15	Distal intron
chr7	128,335,653	128,335,687	-	3.599	3.041	RBM28	ENSG00000106344.8	CDS
chr10	99,620,248	99,620,337	-	4.094	4.060	SLC25A28	ENSG00000155287.12	CDS
chr21	10,330,961	10,331,029	-	4.552	3.833	ENSG00000277693	ENSG00000277693.2	ncRNA
chr9	131,420,677	131,420,741	+	4.566	4.041	PRRC2B	ENSG00000288701.1	Distal intron
chr6	44,113,500	44,113,562	-	7.912	4.622	MRPL14	ENSG00000180992.7	3' UTR
chr4	39,327,556	39,327,599	-	3.330	4.776	RFC1	ENSG00000035928.17	CDS
chr8	22,409,952	22,410,018	+	3.032	3.134	SLC39A14	ENSG00000104635.15	CDS
chr3	9,397,230	9,397,284	-	3.529	3.276	THUMPD3-AS1	ENSG00000206573.11	ncRNA
chr1	225,922,812	225,922,879	-	3.493	3.719	PYCR2\|ENSG00000255835	ENSG00000255835.1\|\|ENSG00000143811.20	Proximal intron
chr19	1,598,738	1,598,798	-	4.284	4.817	UQCR11	ENSG00000127540.12	Proximal intron
chr19	45,677,767	45,677,818	+	4.842	3.189	GIPR	ENSG00000010310.9	CDS
chr2	197,434,706	197,434,759	-	4.087	5.087	SF3B1	ENSG00000115524.17	Proximal intron
chr11	17,075,777	17,075,822	-	59.204	3.259	SNORD14B	ENSG00000201403.1	ncRNA
chr2	97,646,089	97,646,191	+	5.700	3.050	COX5B	ENSG00000135940.7	CDS
chr17	39,153,750	39,153,769	-	3.330	4.426	tRNA-Cys-GCA-2-3	tRNA-Cys-GCA-2-3	tRNA
chr17	39,153,721	39,153,750	-	10.470	3.800	tRNA-Cys-GCA-2-3	tRNA-Cys-GCA-2-3	tRNA
chr12	132,674,278	132,674,359	-	4.025	4.096	POLE	ENSG00000177084.19	Distal intron
chr18	684,291	684,342	-	6.603	3.415	ENOSF1	ENSG00000132199.20	Distal intron
chr12	122,135,654	122,135,776	+	3.599	3.211	MLXIP	ENSG00000175727.14	CDS
chr6	28,364,407	28,364,457	+	3.519	4.560	ZKSCAN3	ENSG00000189298.14	Distal intron
chr1	6,185,452	6,185,523	-	8.957	4.453	RPL22	ENSG00000116251.11	3' UTR
chr6	30,743,369	30,743,494	-	7.162	3.732	IER3	ENSG00000137331.12	3' UTR
chr16	1,746,464	1,746,556	+	15.620	4.126	MAPK8IP3	ENSG00000138834.15	Proximal intron
chr16	89,588,361	89,588,437	+	8.276	3.980	CPNE7	ENSG00000178773.15	Proximal intron
chr1	1,625,003	1,625,081	+	4.766	5.109	MIB2	ENSG00000197530.13	CDS
chr4	82,895,852	82,895,912	-	36.207	4.783	THAP9-AS1	ENSG00000251022.6	ncRNA
chr16	673,929	674,060	+	8.916	3.484	RHOT2	ENSG00000140983.15	CDS
chr22	20,142,892	20,142,977	+	4.766	5.060	ZDHHC8	ENSG00000099904.16	CDS
chr20	49,234,468	49,234,542	+	3.147	3.295	DDX27	ENSG00000124228.15	Proximal intron
chr5	80,651,224	80,651,276	-	6.678	4.024	DHFR	ENSG00000228716.7	Distal intron
chr3	15,836,782	15,836,879	-	7.983	3.258	ANKRD28	ENSG00000206560.12	Distal intron
chr22	49,648,113	49,648,154	-	4.548	4.262	MIR3667HG	ENSG00000188511.14	ncRNA
chr16	2,257,935	2,257,995	-	25.196	4.541	RNPS1	ENSG00000205937.12	Distal intron
chr2	96,859,824	96,859,884	-	9.425	4.511	SEMA4C	ENSG00000168758.11	3' UTR
chr5	40,832,659	40,832,729	-	12.083	3.982	SNORD72	ENSG00000212296.1	ncRNA
chr7	150,371,610	150,371,640	+	3.032	3.191	REPIN1	ENSG00000214022.12	CDS
chr6	161,048,785	161,048,857	+	4.768	3.230	MAP3K4	ENSG00000085511.20	CDS
chr10	71,817,026	71,817,075	-	9.485	3.642	PSAP	ENSG00000197746.15	3' UTR
chrM	4,418	4,461	+	400.000	3.580	MT-TM	ENSG00000210112.1	ncRNA
chr6	63,636,603	63,636,653	+	3.032	3.134	PHF3	ENSG00000118482.12	5' UTR
chr6	27,545,738	27,545,772	+	3.645	3.817	tRNA-Ser-TGA-2-1	tRNA-Ser-TGA-2-1	tRNA
chr2	8,953,990	8,954,054	-	5.468	4.374	MBOAT2	ENSG00000143797.12	Distal intron
chr8	99,293,003	99,293,027	+	5.006	4.006	VPS13B	ENSG00000132549.20	Distal intron
chr8	99,293,027	99,293,047	+	5.006	4.006	VPS13B	ENSG00000132549.20	Distal intron
chr1	44,270,521	44,270,577	-	5.934	4.380	ERI3	ENSG00000117419.16	Distal intron
chr11	65,964,889	65,964,951	+	3.493	3.656	SART1	ENSG00000175467.15	Proximal intron
chr9	131,138,452	131,138,465	+	6.400	5.596	NUP214	ENSG00000126883.19	Distal intron
chr11	62,517,982	62,518,055	-	22.942	3.766	AHNAK	ENSG00000124942.14	CDS
chr11	62,518,055	62,518,086	-	12.634	3.254	AHNAK	ENSG00000124942.14	CDS
chr7	152,177,486	152,177,512	-	3.493	3.776	KMT2C	ENSG00000055609.21	CDS
chr5	109,699,737	109,699,802	-	5.738	5.069	RN7SKP230	ENSG00000202512.1	ncRNA
chr5	79,618,295	79,618,324	+	14.726	6.640	TENT2	ENSG00000164329.14	Distal intron
chr1	173,866,877	173,866,886	-	47.430	3.294	GAS5	ENSG00000234741.10	ncRNA
chr1	173,866,886	173,866,927	-	58.093	3.242	GAS5	ENSG00000234741.10	ncRNA
chr1	173,866,927	173,866,939	-	9.305	3.057	GAS5	ENSG00000234741.10	ncRNA
chr21	43,803,556	43,803,645	+	4.808	3.174	RRP1	ENSG00000160214.13	CDS
chr1	108,956,127	108,956,222	-	3.330	4.656	CLCC1\|AKNAD1	ENSG00000162641.20\|\|ENSG00000121940.17	Distal intron
chr8	141,422,546	141,422,598	+	6.055	3.465	PTP4A3	ENSG00000184489.13	Proximal intron
chr7	148,809,999	148,810,059	-	19.062	5.317	EZH2	ENSG00000106462.12	Proximal intron
chr6	85,589,479	85,589,574	-	3.529	3.550	SNX14	ENSG00000135317.14	Distal intron
chr22	38,495,921	38,495,936	-	5.664	4.172	DDX17	ENSG00000100201.23	CDS
chr6	143,178,103	143,178,154	+	5.817	5.156	AIG1	ENSG00000146416.19	Distal intron
chr1	155,268,512	155,268,562	-	6.719	5.783	CLK2	ENSG00000176444.19	Proximal intron
chr20	36,537,645	36,537,695	-	5.237	4.991	DLGAP4-AS1	ENSG00000232907.9	ncRNA
chr2	171,540,942	171,541,019	+	8.860	3.406	CYBRD1	ENSG00000071967.12	Distal intron
chr6	132,815,309	132,815,316	+	13.970	5.067	SNORD101	ENSG00000206754.1	ncRNA
chr6	132,815,336	132,815,370	+	400.000	4.322	SNORD101	ENSG00000206754.1	ncRNA
chr1	154,627,858	154,627,920	-	5.192	3.330	ADAR	ENSG00000160710.18	5' UTR
chr7	121,257,088	121,257,146	+	6.410	3.103	CPED1	ENSG00000106034.18	Distal intron
chr11	95,789,522	95,789,595	-	5.126	3.238	FAM76B	ENSG00000077458.13	5' UTR
chr9	95,905,057	95,905,088	+	30.866	4.584	RNA5SP289	ENSG00000199202.1	ncRNA
chr9	95,905,036	95,905,057	+	30.200	4.547	RNA5SP289	ENSG00000199202.1	ncRNA
chr10	1,017,396	1,017,410	+	6.986	5.538	GTPBP4	ENSG00000107937.19	3' UTR
chr10	1,017,410	1,017,441	+	10.782	4.973	GTPBP4	ENSG00000107937.19	3' UTR
chr3	47,004,891	47,004,924	+	3.529	3.156	NBEAL2	ENSG00000160796.18	3' splice site
chr20	33,658,571	33,658,645	-	3.032	3.191	NECAB3	ENSG00000125967.17	5' splice site
chr16	2,230,643	2,230,689	+	4.581	3.172	E4F1	ENSG00000167967.16	Distal intron
chr1	226,176,320	226,176,410	-	3.493	3.830	ACBD3	ENSG00000182827.9	Distal intron
chr6	33,196,428	33,196,478	-	3.493	3.656	RXRB	ENSG00000204231.11	CDS
chr7	1,455,022	1,455,091	-	3.032	3.295	MICALL2	ENSG00000164877.19	Distal intron
chrX	154,015,743	154,015,799	-	3.493	3.587	IRAK1	ENSG00000184216.15	Proximal intron
chr4	13,602,374	13,602,449	-	5.192	3.426	BOD1L1	ENSG00000038219.13	CDS
chr16	1,452,484	1,452,553	-	6.675	3.426	CLCN7	ENSG00000103249.19	Proximal intron
chr16	89,303,397	89,303,466	-	4.036	3.406	ANKRD11	ENSG00000167522.17	Distal intron
chr1	1,478,387	1,478,445	+	10.694	5.849	ATAD3B	ENSG00000160072.20	Proximal intron
chr19	6,741,009	6,741,073	+	3.599	3.087	TRIP10	ENSG00000125733.18	CDS
chr14_GL000194v1_random	72,011	72,070	-	3.936	3.361	nan	nan	Intergenic
chr2	202,293,072	202,293,128	+	8.027	4.330	SNORD11	ENSG00000238317.2	ncRNA
chr2	171,158,086	171,158,145	-	6.976	3.912	TLK1	ENSG00000198586.14	Distal intron
chr3	41,199,815	41,199,908	+	4.814	3.009	CTNNB1	ENSG00000168036.18	5' splice site
chr11	291,262	291,367	+	21.464	3.020	PGGHG	ENSG00000142102.16	Proximal intron
chr2	26,045,768	26,045,826	+	3.032	3.341	RAB10	ENSG00000084733.11	Distal intron
chr9	136,830,790	136,830,838	+	4.094	4.156	hsa-mir-4292	MI0015897	miRNA
chr13	91,348,609	91,348,651	+	7.983	3.484	MIR17HG	ENSG00000215417.13	ncRNA
chr13	91,348,086	91,348,124	+	8.916	3.484	MIR17HG	ENSG00000215417.13	ncRNA
chr12	69,246,854	69,246,915	+	10.841	4.541	CPSF6	ENSG00000111605.18	Distal intron
chr21	44,325,830	44,325,898	+	6.211	3.521	PFKL	ENSG00000141959.17	3' splice site
chr7	152,233,893	152,233,962	-	5.006	4.006	KMT2C	ENSG00000055609.21	Distal intron
chr19	49,497,749	49,497,789	+	64.476	3.201	SNORD35B	ENSG00000200530.1	ncRNA
chr17	39,462,128	39,462,172	+	3.936	3.127	CDK12	ENSG00000167258.15	CDS
chr15	90,902,847	90,902,912	+	12.341	3.314	MAN2A2	ENSG00000196547.15	Proximal intron
chr21	46,190,040	46,190,125	-	8.768	4.465	LSS	ENSG00000160285.15	3' UTR
chr11	638,169	638,219	+	3.493	3.719	DRD4	ENSG00000069696.7	Distal intron
chr16	88,662,913	88,662,958	-	6.410	3.103	MVD	ENSG00000167508.12	5' splice site
chr17	40,027,558	40,027,597	-	6.150	3.232	SNORD124	ENSG00000238793.1	ncRNA
chr19	879,296	879,359	-	4.581	3.172	MED16	ENSG00000175221.16	Distal intron
chr19	2,270,131	2,270,195	+	23.977	3.126	OAZ1	ENSG00000104904.12	Proximal intron
chr5	136,080,497	136,080,503	-	400.000	3.830	Vault\|VTRNA2-1	ENSG00000270123.4\|\|ENSG00000278815.1	ncRNA
chr5	136,080,503	136,080,532	-	400.000	3.598	Vault\|VTRNA2-1	ENSG00000270123.4\|\|ENSG00000278815.1	ncRNA
chr5	136,080,532	136,080,545	-	400.000	3.501	Vault\|VTRNA2-1	ENSG00000270123.4\|\|ENSG00000278815.1	ncRNA
chr11	96,384,106	96,384,164	-	4.085	3.241	CCDC82	ENSG00000149231.16	CDS
chr15	20,421,913	20,422,000	-	8.083	3.451	HERC2P3	ENSG00000180229.12	ncRNA
chr21	44,325,630	44,325,710	+	7.770	4.528	PFKL	ENSG00000141959.17	Proximal intron
chr12	95,858,966	95,859,037	+	8.768	3.991	SNRPF	ENSG00000139343.11	5' UTR
chr1	1,321,613	1,321,666	-	7.573	5.622	INTS11	ENSG00000127054.22	Proximal intron
chr9	72,364,602	72,364,647	-	3.529	3.426	ZFAND5	ENSG00000107372.13	CDS
chr9	133,259,215	133,259,266	-	4.087	4.830	ABO	ENSG00000175164.16	Distal intron
chr1	202,772,726	202,772,775	-	5.751	3.850	KDM5B	ENSG00000117139.18	CDS
chr12	120,155,591	120,155,629	-	3.529	3.156	GCN1	ENSG00000089154.11	CDS
chr16	1,453,601	1,453,694	-	4.581	3.448	CLCN7	ENSG00000103249.19	Proximal intron
chr11	5,493,996	5,494,056	-	3.032	3.341	HBG2\|HBE1	ENSG00000213931.7\|\|ENSG00000196565.15	Distal intron
chr16	88,973,853	88,973,903	-	5.622	3.514	CBFA2T3	ENSG00000129993.15	Distal intron
chr15	22,786,929	22,787,016	+	3.530	3.172	NIPA1	ENSG00000170113.16	5' splice site
chr19	5,690,735	5,690,776	+	3.330	4.656	RPL36	ENSG00000130255.13	3' splice site
chr1	42,843,987	42,844,040	+	6.719	5.576	ERMAP	ENSG00000164010.15	3' UTR
chr6	36,601,530	36,601,602	+	6.112	3.576	SRSF3	ENSG00000112081.17	Proximal intron
chr16	676,056	676,165	+	5.074	3.634	RHBDL1	ENSG00000103269.14	CDS
chr4	55,406,744	55,406,779	+	3.493	4.087	TMEM165	ENSG00000134851.13	Distal intron
chr11	35,526,632	35,526,691	-	9.694	6.368	PAMR1	ENSG00000149090.13	Distal intron
chrX	47,142,612	47,142,644	-	6.403	4.587	NDUFB11	ENSG00000147123.12	CDS
chr8	94,529,058	94,529,099	-	3.123	3.011	VIRMA	ENSG00000164944.12	CDS
chr16	1,786,770	1,786,857	+	8.083	3.931	NUBP2	ENSG00000095906.17	CDS
chr3	49,013,184	49,013,254	+	5.006	4.127	WDR6	ENSG00000178252.19	CDS
chr19	2,269,783	2,269,808	+	12.114	3.096	OAZ1	ENSG00000104904.12	5' splice site
chr15	90,902,960	90,903,069	+	15.785	3.011	MAN2A2	ENSG00000196547.15	Proximal intron
chr16	30,524,294	30,524,350	-	5.664	4.415	ZNF768	ENSG00000169957.10	3' UTR
chr22	20,064,068	20,064,137	+	5.112	4.200	TANGO2	ENSG00000183597.16	Proximal intron
chr14	23,068,300	23,068,397	-	10.216	3.785	ACIN1	ENSG00000100813.15	Distal intron
chr7	92,654,859	92,654,908	-	5.112	4.060	CDK6	ENSG00000105810.10	Distal intron
chr17	45,150,289	45,150,328	+	3.493	3.970	HEXIM1	ENSG00000186834.4	3' UTR
chr18	50,283,582	50,283,630	-	5.738	5.127	CXXC1	ENSG00000154832.16	3' splice site
chr19	45,478,641	45,478,653	-	65.284	6.941	tRNA-SeC-TCA-1-1	tRNA-SeC-TCA-1-1	tRNA
chr19	45,478,618	45,478,641	-	400.000	6.226	tRNA-SeC-TCA-1-1	tRNA-SeC-TCA-1-1	tRNA
chr5	140,711,304	140,711,310	+	400.000	6.658	VTRNA1-1	ENSG00000199990.1	ncRNA
chr5	140,711,301	140,711,304	+	400.000	6.651	VTRNA1-1	ENSG00000199990.1	ncRNA
chr5	140,711,310	140,711,335	+	400.000	5.811	VTRNA1-1	ENSG00000199990.1	ncRNA
chr5	140,711,335	140,711,348	+	400.000	5.605	VTRNA1-1	ENSG00000199990.1	ncRNA
chr5	140,711,348	140,711,357	+	400.000	5.326	VTRNA1-1	ENSG00000199990.1	ncRNA
chr14	102,616,475	102,616,531	+	10.115	3.695	RCOR1	ENSG00000089902.10	Distal intron
chr14	102,616,466	102,616,475	+	4.713	3.067	RCOR1	ENSG00000089902.10	Distal intron
chr11	66,617,316	66,617,362	+	6.211	3.228	RBM14\|RBM14-RBM4	ENSG00000248643.5\|\|ENSG00000239306.5	Proximal intron
chr19	2,342,100	2,342,217	+	8.271	3.209	SPPL2B	ENSG00000005206.17	3' UTR
chr4	55,618,952	55,619,036	-	3.330	4.426	NMU	ENSG00000109255.11	Distal intron
chr16	28,156,444	28,156,456	-	5.006	4.127	XPO6	ENSG00000169180.12	CDS
chr16	28,156,410	28,156,444	-	4.842	3.104	XPO6	ENSG00000169180.12	CDS
chr1	93,847,650	93,847,661	+	44.605	4.773	tRNA-Arg-TCT-1-1	tRNA-Arg-TCT-1-1	tRNA
chr1	93,847,620	93,847,650	+	40.095	4.065	tRNA-Arg-TCT-1-1	tRNA-Arg-TCT-1-1	tRNA
chr11	85,664,919	85,664,967	-	3.599	3.087	CREBZF	ENSG00000137504.15	5' UTR
chr21	45,475,698	45,475,741	+	3.645	4.087	COL18A1	ENSG00000182871.16	Proximal intron
chr15	90,879,819	90,879,870	+	13.951	3.068	FURIN	ENSG00000140564.13	CDS

The following tables contain identified motifs, where a motif is a short sequence of nucleotides that is significantly enriched in called peaks. Motifs were identified using HOMER's findMotifsGenome.pl tool. Motifs were called at multiple lengths, and results from all examined lengths are aggregated in the tables.

The following columns are included in the tables:

Motif: logo plot for the identified motif.
IUPAC: sequence of motif in IUPAC code.
Motif length: length of the called motif.
P-value: Significance of the called motif.
-log₁₀(p-value): log transformed significance, a larger number indicates a greater significance.
% Peaks: percent of examined peaks with the identified motif.
% Background: percent of non-peak background regions with the motif.

Please note, this table is interactive. You can search for specific sequences, and can sort the table by any of the columns. The search buttons at thr bottom of the tables allow for specific filtering by sequence or motif length.

ENCSR571ROL (HepG2) Motifs

No significant motif were identified

ENCSR258QKO (K562) Motifs

IUPAC sequence	Motif length	P-value	-log₁₀(p-value)	% Peaks	% Background
CGGACCUGGUUA	12	1e-31	73.43	1.5	0.0
CCUGGUUAGU	10	1e-26	60.54	1.27	0.0
AACUCCUGGGCU	12	1e-23	54.55	4.62	0.53
UCUGAUCUCG	10	1e-23	54.23	1.16	0.0
GAAGCUAAGC	10	1e-22	52.94	1.27	0.01
UGGUUAGU	8	1e-22	52.94	1.27	0.01
CUGAUCUCGGAA	12	1e-22	52.94	1.27	0.01
GCCCAGGCUGGU	12	1e-22	51.19	3.47	0.28
CUGGNCUURR	10	1e-21	49.34	8.55	2.23
GGAAAGCAGGGU	12	1e-20	47.71	1.39	0.01
AAGCAGUC	8	1e-19	44.23	3.24	0.3
GCAGUCCUCC	10	1e-17	39.19	2.08	0.11
AGCAGYCCUCCU	12	1e-15	36.83	4.05	0.67
CUGGUCUC	8	1e-15	36.03	10.17	3.81
CUCCUGGGCUCA	12	1e-15	35.75	10.52	4.03
UUGCYAUGUU	10	1e-15	35.49	2.66	0.26
GGAAGCUA	8	1e-14	33.24	1.39	0.04
UUGGGCUCGCGC	12	1e-14	32.57	1.85	0.11
GGUGGUGGCUGU	12	1e-13	31.07	0.81	0.01
UGGGCUCAAGCM	12	1e-13	30.58	12.25	5.57
GUUCGAAUCCUG	12	1e-13	30.05	0.69	0.0