SRSF9

This analysis report summarizes SRSF9 eCLIP data from ENCODE. The current tab provides an overview of the results, and the other tabs list identified peaks and motifs.

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Experiment Summary

Experiment ID	File ID	Sample	Antibody source	Antibody ID	Antibody lot	Release date	Laboratory	Number of peaks
ENCSR773KRC	ENCFF765PIF	HepG2	MBLI	RN081PW	001	2015-07-15	Gene Yeo, UCSD	671
ENCSR381VNR	ENCFF781BNS	K562	MBLI	RN081PW	001	2022-07-19	Gene Yeo, UCSD	270

SRSF9 Peak Assignments

The following plots show the assignment of peaks into different genic features:

Introns contain other subdivisions, please see the subsequent plot for a breakdown of those features.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

SRSF9 Intron Assignments

The following plots show the assignment of peaks into different intronic features:

5’ splice site: the peak is within the first 100 bp of an intron (5’ to 3’ direction
3’ splice site: the peak is within the last 100 bp of an intron (5’ to 3’ direction)
Proximal intron: the peak is within 100 bp to 500 bp of the nearest exon
Distal intron: greater than 500 bp away from the nearest exon

SRSF9 Motifs

The following plot shows a summary of the top five motifs by significance in each experiment. Motifs were detected with varying length parameters, you may observe a similar motif with different number of bases included multiple times. A motif present in more peaks and with a higher significance will be in the upper right quadrant of the plot, while the lower left quadrant has motifs that are less significant and in fewer peaks.

The following tables contain called SRSF9 peaks. To identify peaks, clusters (regions of read enrichment) in the immunoprecipitated (IP) samples were found using the peak calling tool CLIPper. To account for background signal, a cluster was identified as a peak if the log₂ fold enrichment over input was ≥ 3 and the p-value ≤ 0.001.

Peaks were annotated using transcript information from GENCODE. Each annotated peak is labeled with specific annotation feature types, first split by coding and non-coding transcripts, then by transcript regions, and then by intron/exon proximity regions. For overlapping transcript regions, the following hierarchy is used to label the region: coding sequence (CDS), 5’ or 3’ untranslated region (UTR), intron, non-coding exon, then non-coding intron. For example, if a peak is in the 5’ UTR of one transcript that overlaps an intron of another transcript, the peak region will be labeled as 5’ UTR. All gene annotations are from GENCODE release v41.

The following columns are included in the tables:

Chromosome: chromosome where the peak is located.
Peak start: start coordinate for the peak.
Peak stop: stop coordinate for the peak.
Strand: strand of DNA where the peak was called.
-log₁₀(p-value): significance of the cluster call by CLIPper. Values are log transformed so a larger number indicates a greater significance.
log₂(fold change): log transformed fold enrichment of the IP signal over a matched input.
Gene name: name (symbol) of the gene that overlaps with the peak.
Ensembl ID: unique identifer of the gene that overlaps with the peak.
Feature: which part of the listed gene overlaps with the peak.

Please note, this table is interactive. You can search for specific genes or features, and can sort the table by any of the columns.

ENCSR773KRC (HepG2) Peaks

Chromosome	Peak start	Peak stop	Strand	-log₁₀(p-value)	log₂(fold change)	Gene name	Ensembl ID	Feature
chr5	179,802,274	179,802,329	-	3.078	3.988	MGAT4B	ENSG00000161013.17	5' UTR
chr2	11,581,733	11,581,781	+	3.055	3.683	GREB1	ENSG00000196208.14	Distal intron
chr13	113,533,605	113,533,739	+	4.606	3.671	TMCO3	ENSG00000150403.18	Proximal intron
chr7	1,968,525	1,968,643	-	3.422	3.070	MAD1L1	ENSG00000002822.16	Distal intron
chr6	1,643,131	1,643,190	-	3.733	4.017	GMDS	ENSG00000112699.11	Distal intron
chr8	660,840	661,002	-	4.141	3.786	ERICH1	ENSG00000104714.14	Distal intron
chr19	45,350,610	45,350,681	-	10.143	3.840	ERCC2	ENSG00000104884.17	3' UTR
chr7	77,537,501	77,537,578	+	4.887	3.931	PTPN12	ENSG00000127947.16	CDS
chr14	35,278,595	35,278,698	+	3.078	3.851	PSMA6	ENSG00000100902.11	5' UTR
chr1	93,597,868	93,597,900	+	3.184	3.429	BCAR3-AS1	ENSG00000224093.7	ncRNA
chr19	54,458,425	54,458,472	+	3.860	4.288	LENG8	ENSG00000167615.17	CDS
chr19	34,382,627	34,382,654	+	4.730	3.332	GPI	ENSG00000105220.17	Distal intron
chr7	7,182,920	7,183,046	+	4.380	4.696	C1GALT1	ENSG00000106392.11	Proximal intron
chr17	7,627,573	7,627,679	-	3.773	3.026	SAT2	ENSG00000141504.12	CDS
chr5	177,553,211	177,553,327	-	4.606	3.605	FAM193B	ENSG00000146067.17	5' UTR
chr10	4,983,034	4,983,206	+	6.049	3.896	AKR1C1	ENSG00000187134.14	3' UTR
chr6	44,311,391	44,311,459	-	3.599	3.906	AARS2	ENSG00000124608.5	CDS
chr2	219,234,869	219,234,912	+	3.055	4.033	ANKZF1	ENSG00000163516.14	CDS
chr1	45,607,959	45,608,078	+	6.185	4.892	NASP	ENSG00000132780.17	CDS
chr16	87,845,374	87,845,439	-	3.542	3.105	SLC7A5	ENSG00000103257.9	Distal intron
chr15	41,837,246	41,837,374	+	5.211	3.147	JMJD7	ENSG00000243789.11	3' UTR
chr14_GL000194v1_random	68,702	68,761	-	3.339	4.032	nan	nan	Intergenic
chr2	216,081,590	216,081,646	-	3.901	3.353	PECR	ENSG00000115425.14	CDS
chr17	72,535,746	72,535,807	-	3.599	3.966	LINC00511	ENSG00000227036.10	ncRNA
chr20	63,734,712	63,734,780	+	3.661	3.398	ZGPAT	ENSG00000197114.12	CDS
chr19	18,995,138	18,995,257	-	6.659	3.925	SUGP2	ENSG00000064607.17	CDS
chr11	14,499,696	14,499,798	-	3.308	3.215	COPB1	ENSG00000129083.13	5' UTR
chr6	30,326,638	30,326,720	-	4.381	3.742	HCG18	ENSG00000231074.11	ncRNA
chr20	41,470,846	41,470,952	-	3.055	3.683	CHD6	ENSG00000124177.16	Distal intron
chr20	53,581,451	53,581,538	-	9.919	3.971	ZNF217	ENSG00000171940.14	CDS
chr20	53,581,568	53,581,599	-	6.718	3.408	ZNF217	ENSG00000171940.14	CDS
chr20	53,581,541	53,581,568	-	5.654	3.120	ZNF217	ENSG00000171940.14	CDS
chr19	1,360,168	1,360,300	+	3.599	4.305	PWWP3A	ENSG00000160953.17	CDS
chr2	137,992,169	137,992,249	+	9.549	4.463	HNMT	ENSG00000150540.14	Distal intron
chr1	151,343,120	151,343,176	-	3.078	3.821	RFX5	ENSG00000143390.18	CDS
chr7	43,705,755	43,705,836	-	4.141	3.321	COA1	ENSG00000106603.20	Distal intron
chr22	23,694,196	23,694,367	-	4.970	3.532	GUSBP11	ENSG00000228315.12	ncRNA
chr22	23,683,723	23,683,728	-	4.141	3.406	ENSG00000272578\|GUSBP11	ENSG00000228315.12\|\|ENSG00000272578.5	ncRNA
chr22	23,683,728	23,683,783	-	4.250	3.097	GUSBP11\|ENSG00000272578	ENSG00000272578.5\|\|ENSG00000228315.12	ncRNA
chr11	2,656,304	2,656,345	-	8.397	3.636	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr17	35,844,948	35,845,024	+	6.259	4.242	TAF15	ENSG00000270647.7	CDS
chr17	35,844,838	35,844,948	+	7.646	3.757	TAF15	ENSG00000270647.7	CDS
chr16	89,397,228	89,397,335	-	9.300	4.366	ANKRD11\|ENSG00000288715	ENSG00000167522.17\|\|ENSG00000288715.1	Distal intron
chr20	62,901,914	62,902,050	-	3.733	3.982	DIDO1	ENSG00000101191.17	Distal intron
chr16	50,563,461	50,563,540	+	4.120	4.466	NKD1	ENSG00000140807.7	Distal intron
chr2	3,321,838	3,321,921	-	5.149	4.465	EIPR1	ENSG00000032389.13	Distal intron
chr19	959,691	959,784	+	3.661	3.434	ARID3A	ENSG00000116017.11	Proximal intron
chr17	72,592,265	72,592,394	-	8.180	3.574	LINC00511	ENSG00000227036.10	ncRNA
chr2	152,390,224	152,390,270	+	5.157	4.374	NUDCP1	ENSG00000213197.3	ncRNA
chr7	105,013,542	105,013,616	-	3.055	3.768	KMT2E-AS1	ENSG00000239569.5	ncRNA
chr21	37,098,879	37,099,007	+	3.285	3.982	TTC3	ENSG00000182670.14	3' UTR
chr4	777,143	777,235	-	4.639	4.596	PCGF3-AS1	ENSG00000249592.7	ncRNA
chr5	79,077,479	79,077,603	+	4.898	4.463	BHMT2	ENSG00000132840.10	CDS
chr1	147,204,864	147,205,002	-	6.480	3.390	CCT8P1	ENSG00000226015.2	ncRNA
chr11	116,790,758	116,790,833	-	3.542	3.139	APOA5	ENSG00000110243.12	CDS
chr20	33,659,478	33,659,557	-	5.157	4.613	NECAB3	ENSG00000125967.17	CDS
chr16	89,905,074	89,905,100	+	3.184	3.519	TCF25	ENSG00000141002.20	CDS
chr11	72,231,497	72,231,535	+	3.078	3.789	INPPL1	ENSG00000165458.15	CDS
chr22	38,486,424	38,486,440	-	4.730	3.116	DDX17	ENSG00000100201.23	CDS
chr19	959,789	959,850	+	3.860	4.379	ARID3A	ENSG00000116017.11	Proximal intron
chr6	167,943,401	167,943,456	+	6.127	4.799	AFDN	ENSG00000130396.22	CDS
chr6	167,943,456	167,943,476	+	4.887	3.959	AFDN	ENSG00000130396.22	CDS
chr2	127,423,045	127,423,089	+	5.051	3.375	PROC	ENSG00000115718.18	CDS
chr2	127,423,089	127,423,108	+	3.050	3.135	PROC	ENSG00000115718.18	CDS
chr17	48,928,644	48,928,718	+	3.422	3.042	UBE2Z	ENSG00000159202.18	3' UTR
chr16	89,280,248	89,280,319	-	4.395	3.035	ANKRD11	ENSG00000167522.17	CDS
chr17	72,404,676	72,404,767	-	3.542	3.139	LINC00511	ENSG00000227036.10	ncRNA
chr17	46,959,831	46,959,903	+	6.127	4.764	GOSR2	ENSG00000108433.17	Distal intron
chr15	76,259,704	76,259,769	-	4.120	4.284	TYRO3P	ENSG00000259581.3	ncRNA
chr15	25,081,145	25,081,226	+	3.661	3.159	SNHG14	ENSG00000224078.15	ncRNA
chr22	45,328,394	45,328,420	+	32.767	6.805	FAM118A	ENSG00000100376.12	CDS
chr22	45,328,391	45,328,394	+	29.527	5.705	FAM118A	ENSG00000100376.12	CDS
chr22	45,328,420	45,328,447	+	4.896	3.536	FAM118A	ENSG00000100376.12	CDS
chr9	114,269,240	114,269,293	+	8.032	3.312	COL27A1	ENSG00000196739.15	CDS
chr17	30,477,779	30,477,907	+	3.078	3.755	GOSR1	ENSG00000108587.16	Proximal intron
chr9	114,210,981	114,211,021	+	5.302	3.006	COL27A1	ENSG00000196739.15	CDS
chr10	133,402,166	133,402,235	+	4.252	3.063	MTG1	ENSG00000148824.19	CDS
chr17	58,415,450	58,415,584	-	5.477	3.121	RNF43	ENSG00000108375.13	CDS
chr9	98,056,779	98,056,870	+	3.599	4.121	NANS	ENSG00000095380.11	CDS
chr10	15,318,208	15,318,313	-	3.078	3.720	FAM171A1	ENSG00000148468.17	Distal intron
chr17	82,007,809	82,007,832	+	3.661	3.591	ASPSCR1	ENSG00000169696.16	Distal intron
chrX	47,089,025	47,089,089	+	3.055	3.683	RGN	ENSG00000130988.13	Distal intron
chr20	31,547,367	31,547,516	+	5.530	3.385	MCTS2	ENSG00000101898.7	CDS
chr17	82,576,298	82,576,380	+	6.273	3.289	FOXK2	ENSG00000141568.21	Distal intron
chr20	63,863,998	63,864,063	-	3.078	3.963	ENSG00000268858	ENSG00000268858.2	ncRNA
chr22	43,015,010	43,015,131	-	3.086	3.087	PACSIN2	ENSG00000100266.19	5' UTR
chr9	136,803,111	136,803,175	+	7.508	5.299	CCDC183	ENSG00000213213.14	Proximal intron
chr1	29,181,636	29,181,779	-	4.621	3.945	SRSF4	ENSG00000116350.18	CDS
chr6	52,269,089	52,269,169	-	3.422	3.070	MCM3	ENSG00000112118.20	CDS
chr5	74,635,877	74,635,929	-	3.055	3.683	ENC1	ENSG00000171617.15	CDS
chr17	42,119,575	42,119,617	-	8.686	4.888	KAT2A	ENSG00000108773.11	CDS
chr17	42,119,570	42,119,575	-	5.377	4.515	KAT2A	ENSG00000108773.11	CDS
chr17	42,119,550	42,119,570	-	3.184	3.547	KAT2A	ENSG00000108773.11	CDS
chrUn_GL000218v1	53,982	54,039	-	4.380	4.232	nan	nan	Intergenic
chr8	127,836,508	127,836,612	+	4.225	4.203	PVT1	ENSG00000249859.14	ncRNA
chr17	82,008,557	82,008,605	+	6.147	3.895	ASPSCR1	ENSG00000169696.16	Proximal intron
chr2	74,481,825	74,481,883	-	3.542	3.139	CCDC142	ENSG00000135637.14	CDS
chr19	35,806,461	35,806,527	-	3.982	4.280	PRODH2	ENSG00000250799.11	CDS
chr3	126,452,104	126,452,202	-	3.661	3.379	ZXDC	ENSG00000070476.15	Distal intron
chr3	184,381,567	184,381,625	+	4.848	3.036	CHRD	ENSG00000090539.16	CDS
chr8	143,589,584	143,589,680	-	6.914	4.040	EEF1D	ENSG00000104529.19	CDS
chr6	125,986,633	125,986,769	+	3.184	3.183	TRMT11	ENSG00000066651.20	5' UTR
chr8	144,356,158	144,356,215	-	3.339	3.832	FBXL6	ENSG00000182325.11	CDS
chr6	1,909,694	1,909,821	-	3.342	3.729	GMDS	ENSG00000112699.11	Distal intron
chr6	1,909,821	1,909,968	-	6.054	3.659	GMDS	ENSG00000112699.11	Distal intron
chr6	1,909,598	1,909,694	-	3.651	3.088	GMDS	ENSG00000112699.11	Distal intron
chr7	76,591,982	76,592,080	+	4.009	3.784	LINC03009	ENSG00000205485.13	ncRNA
chr6	3,315,317	3,315,388	-	6.895	3.598	SLC22A23	ENSG00000137266.15	Distal intron
chr19	12,933,599	12,933,709	-	3.422	3.264	FARSA	ENSG00000179115.11	CDS
chr16	791,320	791,377	+	3.055	3.683	CHTF18	ENSG00000127586.17	CDS
chr16	29,986,275	29,986,340	+	3.481	3.985	TAOK2	ENSG00000149930.18	CDS
chr14	19,329,428	19,329,522	-	5.891	4.535	DUXAP10	ENSG00000244306.11	ncRNA
chr16	24,791,482	24,791,575	+	8.615	4.157	TNRC6A	ENSG00000090905.19	CDS
chr7	76,591,709	76,591,766	+	3.422	3.149	LINC03009	ENSG00000205485.13	ncRNA
chrX	48,575,213	48,575,285	+	7.371	3.556	RBM3	ENSG00000102317.18	CDS
chr9	114,235,609	114,235,652	+	9.633	3.272	COL27A1	ENSG00000196739.15	CDS
chr2	187,519,506	187,519,559	-	3.860	4.227	TFPI	ENSG00000003436.16	Distal intron
chr2	187,519,559	187,519,624	-	6.914	3.974	TFPI	ENSG00000003436.16	Distal intron
chr7	157,864,141	157,864,299	-	3.661	3.517	PTPRN2	ENSG00000155093.19	Distal intron
chr16	87,708,350	87,708,465	-	3.055	3.975	KLHDC4	ENSG00000104731.14	CDS
chrX	20,251,322	20,251,398	-	5.672	4.655	RPS6KA3	ENSG00000177189.14	Distal intron
chr21	45,480,698	45,480,716	+	7.628	3.574	COL18A1	ENSG00000182871.16	CDS
chr6	138,424,185	138,424,347	-	8.093	3.791	NHSL1	ENSG00000135540.12	CDS
chr12	46,371,982	46,372,045	-	4.169	3.073	SLC38A2	ENSG00000134294.14	Proximal intron
chr16	48,342,496	48,342,613	+	4.461	3.441	LONP2	ENSG00000102910.14	Distal intron
chr17	40,417,821	40,417,894	-	3.422	3.042	TOP2A	ENSG00000131747.15	5' UTR
chr6	7,583,274	7,583,349	+	8.317	3.417	DSP	ENSG00000096696.15	CDS
chr2	74,474,626	74,474,683	-	4.380	4.277	CCDC142	ENSG00000135637.14	CDS
chr2	241,671,602	241,671,674	+	3.422	3.482	ATG4B	ENSG00000168397.17	Proximal intron
chr6	1,642,771	1,642,851	-	3.875	3.016	GMDS	ENSG00000112699.11	Distal intron
chr18	23,247,279	23,247,376	+	4.225	4.111	CABLES1	ENSG00000134508.13	Distal intron
chr2	231,046,935	231,047,006	+	3.078	3.988	C2orf72	ENSG00000204128.6	CDS
chr17	82,193,962	82,194,063	-	4.490	3.107	CCDC57	ENSG00000176155.21	CDS
chr20	17,638,383	17,638,445	-	5.157	4.581	RRBP1	ENSG00000125844.17	Distal intron
chr18	3,597,795	3,597,880	+	27.376	5.475	DLGAP1-AS1	ENSG00000177337.10	ncRNA
chr3	184,380,709	184,380,795	+	7.376	3.957	CHRD	ENSG00000090539.16	CDS
chr3	184,386,044	184,386,066	+	6.723	3.238	CHRD	ENSG00000090539.16	CDS
chr11	2,651,891	2,651,967	-	10.118	3.915	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr19	38,946,488	38,946,540	-	4.606	3.731	FBXO17\|ENSG00000269547	ENSG00000269547.1\|\|ENSG00000269190.6	CDS
chr12	102,877,457	102,877,514	-	6.268	3.806	PAH	ENSG00000171759.10	CDS
chr14_GL000194v1_random	58,904	58,980	-	3.184	3.112	nan	nan	Intergenic
chr11	72,231,102	72,231,217	+	9.188	4.742	INPPL1	ENSG00000165458.15	CDS
chr2	152,390,385	152,390,423	+	3.127	3.224	NUDCP1	ENSG00000213197.3	ncRNA
chr15	41,837,480	41,837,554	+	3.422	3.325	JMJD7	ENSG00000243789.11	3' UTR
chr20	63,682,531	63,682,643	+	8.593	5.005	RTEL1	ENSG00000258366.12	Distal intron
chr16	29,990,895	29,990,974	+	3.285	3.764	TAOK2	ENSG00000149930.18	CDS
chr1	6,454,617	6,454,683	+	3.078	4.036	ESPN	ENSG00000187017.18	CDS
chr2	74,490,038	74,490,131	+	4.009	3.284	TTC31	ENSG00000115282.21	CDS
chr19	943,008	943,063	+	3.422	3.284	ARID3A	ENSG00000116017.11	Distal intron
chr2	239,948,184	239,948,319	-	3.078	3.789	NDUFA10	ENSG00000130414.13	Distal intron
chr8	30,555,897	30,555,975	+	3.078	3.720	RBPMS	ENSG00000157110.16	Distal intron
chr2	61,177,566	61,177,634	+	13.946	3.591	AHSA2P	ENSG00000173209.23	ncRNA
chr7	100,216,073	100,216,162	-	4.898	4.463	CASTOR3	ENSG00000239521.11	ncRNA
chr7	2,132,416	2,132,543	-	3.481	4.111	MAD1L1	ENSG00000002822.16	Distal intron
chr17	39,461,739	39,461,812	+	5.933	3.593	CDK12	ENSG00000167258.15	5' UTR
chr9	15,423,109	15,423,193	+	5.211	3.556	SNAPC3	ENSG00000164975.16	CDS
chr17	77,402,837	77,402,895	+	3.554	3.173	SEPTIN9	ENSG00000184640.20	Proximal intron
chr1	28,508,127	28,508,139	+	4.775	3.048	RCC1	ENSG00000180198.17	5' UTR
chr3	13,344,921	13,344,965	-	3.285	4.012	NUP210	ENSG00000132182.13	Distal intron
chr17	8,474,938	8,475,063	+	3.661	3.451	NDEL1	ENSG00000166579.16	Distal intron
chr18	3,597,647	3,597,702	+	5.414	4.986	DLGAP1-AS1	ENSG00000177337.10	ncRNA
chr8	93,734,605	93,734,717	-	11.421	5.567	RBM12B	ENSG00000183808.12	CDS
chr16	75,264,379	75,264,449	-	10.170	4.029	BCAR1	ENSG00000050820.17	CDS
chr14	23,059,351	23,059,398	-	4.009	3.567	ACIN1	ENSG00000100813.15	CDS
chr11	2,646,578	2,646,672	-	5.149	4.280	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr11	2,646,687	2,646,776	-	3.422	3.305	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr14	23,059,171	23,059,207	-	15.561	4.804	ACIN1	ENSG00000100813.15	CDS
chr14	23,059,125	23,059,171	-	9.939	3.451	ACIN1	ENSG00000100813.15	CDS
chr7	73,447,263	73,447,320	-	3.285	3.805	BAZ1B	ENSG00000009954.11	CDS
chr11	47,215,186	47,215,243	+	8.907	3.939	DDB2	ENSG00000134574.12	CDS
chr11	47,215,243	47,215,278	+	6.655	3.482	DDB2	ENSG00000134574.12	CDS
chr6	131,826,723	131,826,776	+	3.078	4.202	ENPP1	ENSG00000197594.14	Distal intron
chr18	58,330,788	58,330,885	+	3.599	3.906	NEDD4L	ENSG00000049759.20	CDS
chrX	133,929,476	133,929,536	-	9.247	3.813	GPC3	ENSG00000147257.16	Distal intron
chr8	120,808,585	120,808,674	-	5.149	4.824	SNTB1	ENSG00000172164.15	Distal intron
chr14	61,695,697	61,695,831	+	5.530	3.027	HIF1A	ENSG00000100644.17	CDS
chr5	177,525,048	177,525,154	-	3.184	3.505	FAM193B	ENSG00000146067.17	CDS
chr4	82,426,102	82,426,130	-	7.623	3.787	HNRNPDL	ENSG00000152795.18	CDS
chr22	44,728,869	44,728,953	+	5.414	4.466	PRR5\|PRR5-ARHGAP8	ENSG00000248405.10\|\|ENSG00000186654.21	Distal intron
chr18	58,045,070	58,045,075	+	6.185	5.216	NEDD4L	ENSG00000049759.20	CDS
chr18	58,045,075	58,045,098	+	5.302	3.460	NEDD4L	ENSG00000049759.20	CDS
chr18	58,045,098	58,045,157	+	5.745	3.005	NEDD4L	ENSG00000049759.20	3' UTR
chr11	2,659,148	2,659,223	-	8.526	5.274	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr8	120,668,153	120,668,254	-	4.237	3.532	SNTB1	ENSG00000172164.15	Distal intron
chr14	73,103,325	73,103,452	+	3.733	4.534	RBM25	ENSG00000119707.14	CDS
chr17	44,023,869	44,023,927	-	3.285	3.881	TMEM101	ENSG00000091947.10	ncRNA
chr22	49,961,724	49,961,779	+	3.078	4.351	PIM3	ENSG00000198355.5	CDS
chr7	76,549,744	76,549,852	+	6.441	4.953	LINC03009	ENSG00000205485.13	ncRNA
chr19	1,370,853	1,371,038	+	3.901	3.625	PWWP3A	ENSG00000160953.17	CDS
chr2	64,000,936	64,000,993	-	4.120	4.173	VPS54	ENSG00000143952.20	Distal intron
chr16	89,537,333	89,537,433	+	4.970	3.157	SPG7	ENSG00000197912.16	3' UTR
chr7	158,556,743	158,556,841	-	21.364	5.507	PTPRN2	ENSG00000155093.19	Distal intron
chr20	58,691,466	58,691,556	+	4.862	3.698	STX16-NPEPL1	ENSG00000254995.4	ncRNA
chr8	128,032,244	128,032,355	+	4.250	3.173	PVT1	ENSG00000249859.14	ncRNA
chr20	63,682,426	63,682,528	+	11.043	4.463	RTEL1	ENSG00000258366.12	Distal intron
chr20	63,682,365	63,682,426	+	6.895	3.551	RTEL1	ENSG00000258366.12	Distal intron
chr17	63,813,347	63,813,457	+	3.733	4.082	DDX42	ENSG00000198231.14	CDS
chr16	2,520,767	2,520,848	+	3.184	3.519	AMDHD2	ENSG00000162066.16	CDS
chr7	158,485,154	158,485,246	-	4.120	4.399	PTPRN2	ENSG00000155093.19	Distal intron
chr8	120,783,687	120,783,776	-	10.713	5.548	SNTB1	ENSG00000172164.15	Distal intron
chr14	23,641,664	23,641,667	+	17.234	3.784	DHRS2	ENSG00000100867.15	Distal intron
chr14	23,641,667	23,641,712	+	20.380	3.603	DHRS2	ENSG00000100867.15	Distal intron
chr16	89,284,673	89,284,811	-	6.625	3.287	ANKRD11	ENSG00000167522.17	CDS
chr17	68,543,716	68,543,796	+	3.901	3.289	PRKAR1A	ENSG00000108946.16	Distal intron
chr7	158,450,886	158,451,033	-	5.157	4.613	PTPRN2	ENSG00000155093.19	Distal intron
chr1	8,447,748	8,447,854	-	5.401	4.697	RERE	ENSG00000142599.19	Distal intron
chr9	98,012,449	98,012,472	+	3.733	5.106	ANP32B	ENSG00000136938.9	CDS
chr18	3,456,365	3,456,436	+	3.055	3.727	TGIF1	ENSG00000177426.22	CDS
chr7	2,065,270	2,065,398	-	3.055	3.844	MAD1L1	ENSG00000002822.16	Distal intron
chr7	158,557,348	158,557,411	-	8.937	4.477	PTPRN2	ENSG00000155093.19	Distal intron
chr16	89,282,558	89,282,621	-	8.093	3.688	ANKRD11	ENSG00000167522.17	CDS
chr16	52,546,757	52,546,803	-	3.901	3.485	TOX3	ENSG00000103460.17	5' UTR
chr20	32,435,591	32,435,642	+	6.414	3.450	ASXL1	ENSG00000171456.21	CDS
chr9	114,288,913	114,288,928	+	4.848	3.048	COL27A1	ENSG00000196739.15	CDS
chr9	136,829,782	136,829,842	+	5.928	4.480	RABL6	ENSG00000196642.19	Proximal intron
chr2	3,322,802	3,322,850	-	4.380	4.299	EIPR1	ENSG00000032389.13	Distal intron
chr3	13,348,679	13,348,744	-	4.896	3.664	NUP210	ENSG00000132182.13	Distal intron
chr14	23,068,328	23,068,417	-	11.209	3.487	ACIN1	ENSG00000100813.15	Distal intron
chr5	10,725,308	10,725,445	-	3.733	3.982	DAP	ENSG00000112977.16	Distal intron
chr16	87,924,099	87,924,195	-	3.733	4.671	CA5A	ENSG00000174990.8	Distal intron
chr20	3,912,583	3,912,635	+	3.339	3.980	PANK2	ENSG00000125779.24	CDS
chr11	126,276,069	126,276,235	+	5.891	3.798	FOXRED1	ENSG00000110074.12	CDS
chr17	76,291,023	76,291,113	-	6.147	3.789	QRICH2	ENSG00000129646.16	CDS
chr20	32,436,869	32,436,936	+	5.148	4.617	ASXL1	ENSG00000171456.21	CDS
chr8	142,308,444	142,308,580	-	3.078	3.720	TSNARE1	ENSG00000171045.16	Distal intron
chr3	48,404,452	48,404,490	-	9.161	4.081	PLXNB1	ENSG00000164050.13	CDS
chr3	48,404,435	48,404,452	-	4.950	3.004	PLXNB1	ENSG00000164050.13	3' UTR
chr7	693,322	693,421	-	4.225	4.143	PRKAR1B	ENSG00000188191.15	Distal intron
chr13	112,843,571	112,843,646	+	3.078	3.851	ATP11A	ENSG00000068650.19	Distal intron
chr7	73,520,517	73,520,572	-	4.120	4.220	BAZ1B	ENSG00000009954.11	Distal intron
chr9	114,290,810	114,290,820	+	3.599	4.249	COL27A1	ENSG00000196739.15	CDS
chr16	24,539,779	24,539,840	+	3.481	3.874	RBBP6	ENSG00000122257.20	5' UTR
chr20	3,785,016	3,785,171	-	6.273	3.669	CENPB	ENSG00000125817.8	CDS
chr2	39,343,381	39,343,453	-	3.285	3.844	MAP4K3	ENSG00000011566.15	CDS
chr7	29,284,697	29,284,787	+	3.127	3.082	CHN2\|ENSG00000285162	ENSG00000106069.24\|\|ENSG00000285162.1	Distal intron
chr4	82,426,460	82,426,466	-	9.466	4.022	HNRNPDL	ENSG00000152795.18	CDS
chr9	98,011,353	98,011,390	+	3.777	4.641	ANP32B	ENSG00000136938.9	CDS
chr6	127,266,907	127,267,041	+	3.901	3.596	RNF146	ENSG00000118518.17	5' UTR
chr2	21,021,536	21,021,609	-	6.109	3.416	APOB	ENSG00000084674.15	Distal intron
chr14	69,771,564	69,771,619	+	13.179	4.084	SRSF5	ENSG00000100650.16	3' UTR
chr19	35,022,286	35,022,345	+	3.860	3.975	GRAMD1A	ENSG00000089351.15	Proximal intron
chr8	122,819,181	122,819,281	+	3.339	4.125	ZHX2	ENSG00000178764.8	Distal intron
chr20	62,334,264	62,334,329	-	6.620	3.040	LAMA5	ENSG00000130702.15	CDS
chr17	36,500,833	36,500,953	-	3.860	4.344	MYO19	ENSG00000278259.5	CDS
chr19	49,010,987	49,011,038	+	5.414	4.425	RUVBL2	ENSG00000183207.14	CDS
chr7	64,994,827	64,994,918	-	3.308	3.011	ERV3-1	ENSG00000213462.5	Distal intron
chr7	151,079,691	151,079,786	-	3.422	3.264	FASTK	ENSG00000164896.21	CDS
chr2	3,472,473	3,472,557	+	3.554	3.258	TRAPPC12	ENSG00000171853.16	Distal intron
chr17	82,254,922	82,254,983	-	5.634	4.117	CSNK1D	ENSG00000141551.15	Proximal intron
chr2	3,473,057	3,473,116	+	3.510	4.017	TRAPPC12	ENSG00000171853.16	Distal intron
chr9	114,284,723	114,284,778	+	8.913	3.018	COL27A1	ENSG00000196739.15	CDS
chr2	75,710,756	75,710,835	-	3.339	3.925	GCFC2	ENSG00000005436.14	CDS
chr7	73,599,524	73,599,550	-	6.655	3.731	MLXIPL	ENSG00000009950.16	CDS
chr7	23,415,018	23,415,074	-	3.055	4.087	IGF2BP3	ENSG00000136231.14	Distal intron
chr16	70,680,228	70,680,304	-	5.692	3.175	MTSS2	ENSG00000132613.16	Proximal intron
chr6	30,616,894	30,616,993	-	4.621	3.542	PPP1R10	ENSG00000204569.10	5' UTR
chr22	45,328,011	45,328,064	+	36.650	6.033	FAM118A	ENSG00000100376.12	CDS
chr12	123,608,689	123,608,817	+	4.380	4.277	DDX55	ENSG00000111364.16	CDS
chr20	62,323,774	62,323,792	-	3.422	3.220	LAMA5	ENSG00000130702.15	CDS
chr22	45,757,095	45,757,208	+	5.401	4.413	ATXN10	ENSG00000130638.17	Distal intron
chr22	50,414,617	50,414,688	+	4.169	3.083	PPP6R2	ENSG00000100239.16	CDS
chr20	62,821,180	62,821,184	+	4.621	3.420	COL9A3	ENSG00000092758.18	CDS
chr20	62,821,184	62,821,212	+	4.878	3.257	COL9A3	ENSG00000092758.18	CDS
chr2	101,033,662	101,033,736	-	5.891	3.732	TBC1D8	ENSG00000204634.13	CDS
chr6	138,430,514	138,430,563	-	3.554	3.143	NHSL1	ENSG00000135540.12	CDS
chr17	45,150,154	45,150,215	+	4.490	3.294	HEXIM1	ENSG00000186834.4	CDS
chr11	83,157,160	83,157,213	+	3.661	3.320	PCF11	ENSG00000165494.12	5' UTR
chr17	81,996,544	81,996,573	+	13.116	3.228	ASPSCR1	ENSG00000169696.16	CDS
chr6	32,971,790	32,971,911	+	8.544	3.853	BRD2	ENSG00000204256.14	CDS
chr16	22,469,020	22,469,065	+	3.184	3.087	SMG1P1	ENSG00000237296.11	ncRNA
chr11	130,121,771	130,121,807	+	9.697	3.972	APLP2	ENSG00000084234.18	CDS
chr11	130,121,742	130,121,771	+	8.307	3.748	APLP2	ENSG00000084234.18	CDS
chr8	650,100	650,191	-	5.157	4.374	ERICH1	ENSG00000104714.14	Distal intron
chr6	138,432,427	138,432,491	-	3.127	3.499	NHSL1	ENSG00000135540.12	CDS
chr6	32,969,372	32,969,438	+	3.422	3.197	BRD2	ENSG00000204256.14	5' splice site
chr12	71,663,047	71,663,166	-	4.681	3.465	ZFC3H1	ENSG00000133858.17	CDS
chr2	100,878,103	100,878,212	+	4.887	3.686	NPAS2	ENSG00000170485.17	Distal intron
chr3	30,681,407	30,681,497	+	5.119	3.708	TGFBR2	ENSG00000163513.19	Distal intron
chr14	89,291,509	89,291,588	-	4.120	4.381	CAP2P1	ENSG00000259151.2	ncRNA
chr14	20,995,900	20,995,962	+	4.011	3.101	METTL17	ENSG00000165792.18	CDS
chr2	134,954,219	134,954,298	+	3.422	3.042	CCNT2	ENSG00000082258.13	CDS
chr4	82,426,466	82,426,517	-	10.332	3.890	HNRNPDL	ENSG00000152795.18	CDS
chr2	241,721,155	241,721,230	+	3.554	3.173	ING5	ENSG00000168395.16	3' UTR
chr7	105,012,634	105,012,707	-	5.891	4.535	LINC01004	ENSG00000228393.6	ncRNA
chr7	155,769,567	155,769,645	+	5.157	4.456	RBM33	ENSG00000184863.11	Distal intron
chr20	63,680,662	63,680,718	+	3.078	4.305	RTEL1	ENSG00000258366.12	CDS
chr12	101,739,507	101,739,582	+	5.451	3.451	CHPT1	ENSG00000111666.11	ncRNA
chr7	100,215,981	100,216,073	-	7.781	4.820	CASTOR3	ENSG00000239521.11	ncRNA
chr16	1,318,895	1,318,950	+	4.697	4.229	UBE2I	ENSG00000103275.21	Distal intron
chr19	1,274,415	1,274,443	+	6.895	3.794	CIRBP	ENSG00000099622.14	3' UTR
chr19	1,274,399	1,274,415	+	6.655	3.783	CIRBP	ENSG00000099622.14	3' UTR
chr19	1,274,326	1,274,379	+	3.422	3.697	CIRBP	ENSG00000099622.14	3' UTR
chr20	44,425,369	44,425,474	+	3.554	3.111	HNF4A	ENSG00000101076.20	Distal intron
chr5	60,460,632	60,460,693	-	3.733	4.082	SETP21	ENSG00000214244.4	ncRNA
chr16	89,365,980	89,366,032	-	3.055	3.807	ENSG00000288715\|ANKRD11	ENSG00000288715.1\|\|ENSG00000167522.17	Distal intron
chr16	50,628,335	50,628,431	+	7.930	4.118	NKD1	ENSG00000140807.7	Distal intron
chr19	942,826	942,885	+	5.634	3.758	ARID3A	ENSG00000116017.11	Distal intron
chr9	98,011,276	98,011,347	+	4.629	4.008	ANP32B	ENSG00000136938.9	CDS
chr8	143,562,034	143,562,124	+	4.141	3.463	GSDMD	ENSG00000104518.11	CDS
chr11	72,013,267	72,013,354	-	3.661	3.159	NUMA1	ENSG00000137497.19	CDS
chr1	219,200,802	219,200,934	+	3.078	3.963	LYPLAL1	ENSG00000143353.12	Distal intron
chr16	2,769,885	2,769,916	+	3.901	3.467	SRRM2	ENSG00000167978.17	Proximal intron
chr16	87,900,429	87,900,533	-	4.639	4.266	CA5A	ENSG00000174990.8	Distal intron
chr20	35,714,356	35,714,386	-	3.510	4.398	RBM39	ENSG00000131051.24	CDS
chr20	35,714,295	35,714,356	-	10.561	4.080	RBM39	ENSG00000131051.24	CDS
chr6	154,510,021	154,510,077	-	3.078	3.755	CNKSR3\|ENSG00000288520	ENSG00000288520.1\|\|ENSG00000153721.19	CDS
chr3	52,290,084	52,290,160	+	4.621	3.486	GLYCTK	ENSG00000168237.18	Proximal intron
chr3	32,261,999	32,262,155	+	3.554	3.143	CMTM8	ENSG00000170293.9	Distal intron
chr16	16,103,656	16,103,762	+	7.423	3.925	ABCC1	ENSG00000103222.20	Distal intron
chr21	45,495,356	45,495,360	+	8.279	3.098	COL18A1	ENSG00000182871.16	CDS
chr21	45,495,360	45,495,391	+	10.278	3.028	COL18A1	ENSG00000182871.16	CDS
chr9	98,015,362	98,015,408	+	6.127	5.316	ANP32B	ENSG00000136938.9	CDS
chr10	101,818,096	101,818,161	-	4.225	4.111	OGA	ENSG00000198408.14	5' UTR
chr8	93,734,205	93,734,282	-	9.046	4.166	RBM12B	ENSG00000183808.12	CDS
chr17	76,293,837	76,293,937	-	5.634	3.849	QRICH2	ENSG00000129646.16	CDS
chr3	196,966,820	196,966,887	-	6.174	3.331	PIGZ	ENSG00000119227.8	Distal intron
chr17	50,552,100	50,552,169	+	3.661	3.232	SPATA20	ENSG00000006282.21	CDS
chr12	56,096,576	56,096,601	+	4.461	3.334	ERBB3	ENSG00000065361.17	CDS
chr3	9,812,993	9,813,111	+	4.896	3.488	TTLL3\|ARPC4-TTLL3	ENSG00000250151.9\|\|ENSG00000214021.17	CDS
chr12	132,784,119	132,784,229	-	7.861	3.586	GOLGA3	ENSG00000090615.16	CDS
chr1	2,240,717	2,240,768	+	3.777	3.258	SKI	ENSG00000157933.10	Distal intron
chr20	25,509,222	25,509,306	-	4.925	4.340	NINL	ENSG00000101004.15	Distal intron
chr14_GL000194v1_random	68,601	68,702	-	3.078	4.238	nan	nan	Intergenic
chr1	150,579,080	150,579,225	-	9.441	4.650	MCL1	ENSG00000143384.14	CDS
chrX	154,542,967	154,543,096	+	3.342	3.173	IKBKG	ENSG00000269335.7	Distal intron
chr9	87,498,977	87,499,067	+	3.339	4.167	DAPK1	ENSG00000196730.13	5' UTR
chr12	104,303,913	104,304,084	+	10.246	4.527	EID3	ENSG00000255150.2	CDS
chr6	131,828,110	131,828,230	+	5.994	3.099	ENPP1	ENSG00000197594.14	Distal intron
chr22	50,432,273	50,432,330	+	3.339	4.395	PPP6R2	ENSG00000100239.16	CDS
chr16	29,912,140	29,912,215	-	3.599	3.966	KCTD13	ENSG00000174943.11	3' splice site
chr1	8,025,948	8,026,026	-	3.901	3.679	ERRFI1	ENSG00000116285.13	Proximal intron
chr8	93,733,823	93,733,882	-	6.185	4.676	RBM12B	ENSG00000183808.12	CDS
chr3	172,040,266	172,040,330	+	5.891	4.646	FNDC3B	ENSG00000075420.13	Proximal intron
chr12	6,548,423	6,548,533	-	3.510	3.951	IFFO1	ENSG00000010295.20	CDS
chr14	34,462,069	34,462,134	-	5.211	3.342	SPTSSA	ENSG00000165389.7	CDS
chr9	114,236,980	114,237,022	+	7.788	3.442	COL27A1	ENSG00000196739.15	CDS
chr20	25,222,231	25,222,335	+	6.507	3.416	ENTPD6	ENSG00000197586.13	Distal intron
chr20	3,889,386	3,889,464	+	4.606	4.088	PANK2	ENSG00000125779.24	CDS
chr11	65,500,662	65,500,702	+	400.000	3.664	MALAT1	ENSG00000251562.10	ncRNA
chr11	65,500,638	65,500,661	+	81.191	3.647	MALAT1	ENSG00000251562.10	ncRNA
chr11	65,500,612	65,500,638	+	31.987	3.577	MALAT1	ENSG00000251562.10	ncRNA
chr11	65,500,588	65,500,602	+	18.044	3.441	MALAT1	ENSG00000251562.10	ncRNA
chr11	65,500,702	65,500,713	+	400.000	3.427	MALAT1	ENSG00000251562.10	ncRNA
chr11	65,500,720	65,500,728	+	76.711	3.117	MALAT1	ENSG00000251562.10	ncRNA
chr11	65,500,566	65,500,588	+	10.654	3.114	MALAT1	ENSG00000251562.10	ncRNA
chr11	65,500,602	65,500,612	+	12.471	3.112	MALAT1	ENSG00000251562.10	ncRNA
chr16	68,231,968	68,232,087	-	3.554	3.077	ESRP2	ENSG00000103067.14	CDS
chr8	644,121	644,280	-	5.366	3.728	ERICH1	ENSG00000104714.14	Distal intron
chr2	101,011,162	101,011,286	+	4.250	3.081	RPL31	ENSG00000071082.11	Distal intron
chr20	37,501,966	37,502,179	-	6.684	4.977	BLCAP	ENSG00000166619.15	ncRNA
chr3	15,052,495	15,052,569	-	3.422	3.381	MRPS25	ENSG00000131368.9	CDS
chr11	85,664,504	85,664,581	-	7.745	3.220	CREBZF	ENSG00000137504.15	CDS
chr15	98,779,683	98,779,817	+	11.831	4.637	IGF1R	ENSG00000140443.15	Distal intron
chr19	56,815,057	56,815,122	-	12.336	3.134	PEG3	ENSG00000198300.14	CDS
chr20	32,435,871	32,435,889	+	3.339	3.925	ASXL1	ENSG00000171456.21	CDS
chr11	2,652,426	2,652,536	-	21.508	5.599	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr22	45,328,064	45,328,101	+	7.330	4.784	FAM118A	ENSG00000100376.12	5' splice site
chr14	23,639,891	23,639,896	+	18.765	3.287	DHRS2	ENSG00000100867.15	CDS
chr14	23,639,881	23,639,891	+	22.632	3.213	DHRS2	ENSG00000100867.15	CDS
chr17	57,107,115	57,107,178	+	3.249	3.144	AKAP1	ENSG00000121057.13	CDS
chr7	158,022,013	158,022,158	-	5.692	3.360	PTPRN2	ENSG00000155093.19	Distal intron
chr16	89,522,407	89,522,465	+	3.184	3.460	SPG7	ENSG00000197912.16	Distal intron
chr16	87,417,273	87,417,336	-	5.928	4.682	ZCCHC14	ENSG00000140948.13	Proximal intron
chr2	177,264,504	177,264,574	-	7.628	3.900	NFE2L2	ENSG00000116044.17	CDS
chr19	943,662	943,749	+	15.773	4.977	ARID3A	ENSG00000116017.11	Distal intron
chr19	943,617	943,662	+	6.049	3.826	ARID3A	ENSG00000116017.11	Distal intron
chr20	63,742,910	63,742,979	+	4.169	3.209	SLC2A4RG	ENSG00000125520.14	CDS
chr6	108,074,335	108,074,476	-	3.422	3.363	OSTM1	ENSG00000081087.16	CDS
chr22	21,445,785	21,445,905	+	11.499	5.461	HIC2	ENSG00000169635.10	CDS
chr16	4,860,784	4,860,987	+	3.422	3.197	UBN1	ENSG00000118900.15	CDS
chr5	36,885,315	36,885,434	+	3.599	4.144	KRT18P31	ENSG00000249850.1	ncRNA
chr20	2,655,324	2,655,339	+	6.962	3.464	NOP56	ENSG00000101361.17	CDS
chr6	143,061,341	143,061,386	+	4.681	3.440	AIG1	ENSG00000146416.19	3' UTR
chr1	16,625,852	16,625,950	-	7.788	3.492	CROCCP2	ENSG00000215908.11	ncRNA
chr15	98,777,545	98,777,636	+	3.599	4.121	IGF1R	ENSG00000140443.15	Distal intron
chr19	943,751	943,805	+	7.084	4.745	ARID3A	ENSG00000116017.11	Distal intron
chr1	203,798,069	203,798,146	+	5.149	4.810	ZBED6	ENSG00000257315.4	CDS
chr6	63,527,994	63,528,107	+	5.826	3.860	PTP4A1	ENSG00000112245.13	5' UTR
chr8	38,786,083	38,786,179	+	5.928	5.001	TACC1	ENSG00000147526.20	Proximal intron
chr7	66,086,743	66,086,820	+	3.086	3.099	ASL	ENSG00000126522.17	CDS
chr8	143,595,982	143,596,097	-	7.206	3.122	EEF1D	ENSG00000104529.19	5' UTR
chr7	23,415,403	23,415,485	-	11.156	5.308	IGF2BP3	ENSG00000136231.14	Distal intron
chr7	23,415,485	23,415,550	-	6.185	4.853	IGF2BP3	ENSG00000136231.14	Distal intron
chr7	23,415,299	23,415,403	-	9.439	3.450	IGF2BP3	ENSG00000136231.14	Distal intron
chr7	1,933,749	1,933,916	-	4.697	4.390	MAD1L1	ENSG00000002822.16	Distal intron
chr14	21,259,217	21,259,281	-	4.629	3.326	HNRNPC	ENSG00000092199.19	Distal intron
chr16	1,318,543	1,318,584	+	3.055	3.768	UBE2I	ENSG00000103275.21	Distal intron
chr3	48,633,484	48,633,517	-	6.237	3.431	SLC26A6	ENSG00000225697.13	CDS
chr3	48,633,517	48,633,541	-	4.970	3.427	SLC26A6	ENSG00000225697.13	CDS
chr3	48,695,181	48,695,341	-	4.252	3.006	IP6K2	ENSG00000068745.15	CDS
chr2	231,711,971	231,711,984	+	5.902	3.734	PTMA	ENSG00000187514.17	CDS
chr2	231,711,906	231,711,971	+	5.915	3.500	PTMA	ENSG00000187514.17	CDS
chr14	39,267,496	39,267,504	+	7.406	3.350	MIA2	ENSG00000150527.18	CDS
chr14	39,267,504	39,267,553	+	9.406	3.214	MIA2	ENSG00000150527.18	CDS
chr2	237,737,068	237,737,149	+	4.639	4.353	LRRFIP1	ENSG00000124831.20	Distal intron
chr7	158,420,667	158,420,761	-	7.376	3.471	PTPRN2	ENSG00000155093.19	Distal intron
chr9	114,290,820	114,290,861	+	4.250	3.229	COL27A1	ENSG00000196739.15	CDS
chr19	24,033,471	24,033,619	+	3.184	3.307	ZNF254	ENSG00000213096.11	5' UTR
chr22	23,659,972	23,660,001	-	3.661	3.255	GUSBP11\|ENSG00000272578	ENSG00000228315.12\|\|ENSG00000272578.5	ncRNA
chr14	34,629,896	34,629,957	-	3.078	4.183	SNX6	ENSG00000129515.20	CDS
chr6	41,551,063	41,551,211	+	5.891	4.794	FOXP4	ENSG00000137166.17	Distal intron
chr14	105,374,622	105,374,686	+	4.697	4.229	RPS20P33	ENSG00000242085.1	ncRNA
chr14	39,181,635	39,181,685	+	3.055	4.379	PNN	ENSG00000100941.9	CDS
chr16	89,303,840	89,303,937	-	4.681	3.641	ANKRD11	ENSG00000167522.17	Distal intron
chr6	31,969,297	31,969,387	+	3.599	4.287	SKIV2L	ENSG00000204351.13	CDS
chr9	114,267,947	114,268,028	+	5.176	3.075	COL27A1	ENSG00000196739.15	Proximal intron
chr9	114,246,600	114,246,692	+	9.396	5.060	COL27A1	ENSG00000196739.15	Distal intron
chr7	158,556,967	158,557,057	-	17.395	6.101	PTPRN2	ENSG00000155093.19	Distal intron
chr7	158,556,885	158,556,952	-	9.188	4.518	PTPRN2	ENSG00000155093.19	Distal intron
chr19	35,811,958	35,812,016	-	7.508	5.157	PRODH2	ENSG00000250799.11	CDS
chr12	131,711,109	131,711,275	+	6.054	3.275	SFSWAP	ENSG00000061936.10	CDS
chr2	69,829,956	69,830,069	+	4.621	3.643	GMCL1	ENSG00000087338.5	CDS
chr17	47,975,523	47,975,572	+	3.301	3.350	CDK5RAP3	ENSG00000108465.15	CDS
chr17	39,462,076	39,462,169	+	4.713	3.144	CDK12	ENSG00000167258.15	CDS
chr3	185,645,350	185,645,418	-	3.901	3.485	IGF2BP2	ENSG00000073792.16	3' UTR
chr17	80,803,856	80,803,984	+	3.599	3.994	RPTOR	ENSG00000141564.16	Distal intron
chr18	69,402,857	69,402,963	+	8.032	4.933	DOK6	ENSG00000206052.11	Distal intron
chr2	235,636,403	235,636,473	+	3.055	3.727	AGAP1	ENSG00000157985.20	Distal intron
chr17	4,672,067	4,672,167	-	6.833	5.124	PELP1	ENSG00000141456.16	CDS
chr18	58,044,688	58,044,709	+	6.480	3.679	NEDD4L	ENSG00000049759.20	CDS
chr2	152,389,626	152,389,710	+	5.841	3.882	FMNL2	ENSG00000157827.20	Distal intron
chr6	166,999,376	166,999,524	+	5.751	3.368	CEP43	ENSG00000213066.13	CDS
chr3	195,692,369	195,692,620	+	11.684	4.558	MUC20-OT1	ENSG00000242086.8	ncRNA
chr20	63,739,151	63,739,227	+	5.598	3.787	ENSG00000273047	ENSG00000273047.1	Distal intron
chr18	69,402,690	69,402,745	+	3.285	3.764	DOK6	ENSG00000206052.11	Distal intron
chr6	41,551,246	41,551,324	+	3.982	4.012	FOXP4	ENSG00000137166.17	Distal intron
chr2	85,542,669	85,542,706	+	6.982	4.064	MAT2A	ENSG00000168906.13	CDS
chr2	85,542,706	85,542,732	+	7.431	3.355	MAT2A	ENSG00000168906.13	CDS
chr2	85,542,732	85,542,748	+	5.301	3.020	MAT2A	ENSG00000168906.13	CDS
chr11	47,732,186	47,732,278	-	4.381	3.456	FNBP4	ENSG00000109920.13	Proximal intron
chr20	31,547,251	31,547,342	+	3.901	3.535	HM13	ENSG00000101294.18	Distal intron
chr6	138,430,634	138,430,728	-	5.377	3.593	NHSL1	ENSG00000135540.12	CDS
chr6	10,556,866	10,556,953	+	5.157	4.659	GCNT2	ENSG00000111846.20	CDS
chr2	100,820,820	100,820,907	+	3.901	3.413	NPAS2	ENSG00000170485.17	Proximal intron
chr2	100,820,698	100,820,761	+	4.237	3.310	NPAS2	ENSG00000170485.17	Proximal intron
chr1	93,597,957	93,598,011	+	5.414	4.731	BCAR3-AS1	ENSG00000224093.7	ncRNA
chr20	326,714	326,797	+	4.141	3.385	SOX12	ENSG00000177732.9	CDS
chr2	53,970,691	53,970,806	-	6.147	3.702	PSME4	ENSG00000068878.15	CDS
chr21	44,774,750	44,774,809	-	5.119	3.605	UBE2G2	ENSG00000184787.19	Distal intron
chr19	1,274,648	1,274,662	+	4.141	3.445	CIRBP	ENSG00000099622.14	3' UTR
chr2	21,020,545	21,020,622	-	9.439	3.673	APOB	ENSG00000084674.15	Distal intron
chr20	36,863,437	36,863,539	-	5.148	4.334	SOGA1	ENSG00000149639.15	5' UTR
chr2	237,579,336	237,579,401	-	8.321	3.895	RAB17	ENSG00000124839.13	Distal intron
chr2	237,579,401	237,579,475	-	9.714	3.509	RAB17	ENSG00000124839.13	Distal intron
chr12	102,866,652	102,866,664	-	3.510	3.916	PAH	ENSG00000171759.10	CDS
chr20	63,919,343	63,919,454	+	11.679	5.360	hsa-mir-941-1	MI0005763	miRNA
chr3	196,967,551	196,967,618	-	10.486	4.334	PIGZ	ENSG00000119227.8	Distal intron
chr3	196,967,498	196,967,551	-	7.423	4.041	PIGZ	ENSG00000119227.8	Distal intron
chr17	81,922,930	81,923,037	-	3.901	3.311	MAFG	ENSG00000197063.11	CDS
chr15	70,069,600	70,069,708	-	3.078	3.755	TLE3	ENSG00000140332.18	Distal intron
chr7	73,597,656	73,597,714	-	9.402	3.628	MLXIPL	ENSG00000009950.16	CDS
chr21	43,745,169	43,745,191	+	3.860	4.307	PDXK	ENSG00000160209.19	Distal intron
chr9	136,809,881	136,809,971	+	7.695	3.466	ENSG00000273066	ENSG00000273066.5	ncRNA
chr12	120,967,494	120,967,552	-	6.959	4.720	HNF1A-AS1	ENSG00000241388.6	ncRNA
chr7	157,837,637	157,837,730	-	4.381	3.530	PTPRN2	ENSG00000155093.19	Distal intron
chr6	33,196,460	33,196,580	-	4.736	3.163	RXRB	ENSG00000204231.11	CDS
chr16	407,453	407,544	+	3.184	3.288	DECR2	ENSG00000242612.7	CDS
chr2	237,579,895	237,579,951	-	11.179	5.453	RAB17	ENSG00000124839.13	Distal intron
chr2	237,579,832	237,579,895	-	16.577	4.917	RAB17	ENSG00000124839.13	Distal intron
chr2	3,467,583	3,467,644	+	3.481	4.192	TRAPPC12	ENSG00000171853.16	Distal intron
chr1	29,179,434	29,179,508	-	5.129	3.532	SRSF4	ENSG00000116350.18	Distal intron
chr17	76,383,053	76,383,112	+	4.250	3.317	SPHK1	ENSG00000176170.14	Distal intron
chr17	65,529,937	65,530,012	-	5.211	3.516	AXIN2	ENSG00000168646.14	CDS
chr1	28,506,044	28,506,087	+	5.301	3.351	RCC1	ENSG00000180198.17	5' UTR
chr16	20,707,346	20,707,415	+	3.184	3.636	ACSM3	ENSG00000005187.12	Distal intron
chr2	27,370,274	27,370,331	-	4.009	3.255	EIF2B4	ENSG00000115211.17	CDS
chr12	23,824,444	23,824,534	-	4.925	4.567	SOX5	ENSG00000134532.19	Distal intron
chr3	184,385,217	184,385,239	+	9.170	4.369	CHRD	ENSG00000090539.16	CDS
chr3	56,682,923	56,683,006	-	3.078	4.124	TASOR	ENSG00000163946.14	CDS
chr17	41,819,072	41,819,138	+	6.362	3.138	FKBP10	ENSG00000141756.19	3' splice site
chr12	65,853,040	65,853,208	+	10.028	4.817	HMGA2	ENSG00000149948.14	Distal intron
chr17	80,581,919	80,582,079	+	5.119	3.527	RPTOR	ENSG00000141564.16	Distal intron
chr16	22,008,337	22,008,442	+	3.481	3.874	MOSMO	ENSG00000185716.12	CDS
chr7	158,549,758	158,549,852	-	4.730	3.294	PTPRN2	ENSG00000155093.19	Distal intron
chr4	123,398,210	123,398,294	+	3.860	4.344	SPRY1	ENSG00000164056.11	5' UTR
chr2	21,021,374	21,021,492	-	5.641	3.261	APOB	ENSG00000084674.15	Distal intron
chr4	151,325,420	151,325,519	-	6.684	4.828	SH3D19	ENSG00000109686.19	5' UTR
chr16	89,522,475	89,522,528	+	8.686	4.171	SPG7	ENSG00000197912.16	Distal intron
chr3	82,288,158	82,288,279	+	6.268	3.844	LINC02008	ENSG00000239440.6	ncRNA
chr2	62,855,724	62,855,792	+	5.928	4.560	EHBP1	ENSG00000115504.15	Distal intron
chr21	46,150,097	46,150,148	-	10.325	3.153	FTCD	ENSG00000160282.15	CDS
chr2	86,033,634	86,033,721	-	3.554	3.425	POLR1A	ENSG00000068654.17	CDS
chr17	80,625,712	80,625,794	+	3.339	4.299	RPTOR	ENSG00000141564.16	CDS
chr13	113,325,954	113,326,065	-	3.661	3.132	GRTP1	ENSG00000139835.14	CDS
chr3	48,429,050	48,429,098	-	3.901	3.242	PLXNB1	ENSG00000164050.13	Proximal intron
chr22	31,611,138	31,611,216	+	5.672	4.686	SFI1	ENSG00000198089.16	CDS
chr12	26,833,095	26,833,163	-	6.259	4.012	ITPR2	ENSG00000123104.12	5' UTR
chr5	173,328,204	173,328,305	-	8.093	3.827	STC2	ENSG00000113739.11	5' UTR
chr14	23,308,827	23,308,921	+	3.536	3.044	BCL2L2	ENSG00000129473.11	CDS
chr20	62,649,058	62,649,155	+	4.970	3.106	SLCO4A1	ENSG00000101187.16	Distal intron
chr7	158,484,727	158,484,833	-	6.655	3.886	PTPRN2	ENSG00000155093.19	Distal intron
chr6	30,288,831	30,288,953	-	6.505	4.281	HCG18	ENSG00000231074.11	ncRNA
chr4	1,235,949	1,236,054	-	5.129	3.625	CTBP1	ENSG00000159692.17	3' UTR
chr17	59,620,346	59,620,403	+	3.733	3.945	CLTC	ENSG00000141367.13	5' splice site
chr15	101,468,559	101,468,641	-	4.464	4.171	PCSK6	ENSG00000140479.18	Distal intron
chr2	3,446,642	3,446,705	+	3.860	4.379	TRAPPC12	ENSG00000171853.16	Distal intron
chr2	152,390,152	152,390,210	+	13.680	5.865	NUDCP1	ENSG00000213197.3	ncRNA
chr1	150,220,684	150,220,761	-	4.464	5.004	ANP32E	ENSG00000143401.15	CDS
chr11	2,652,737	2,652,776	-	5.148	4.876	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr4	78,080,195	78,080,294	+	5.414	4.542	FRAS1	ENSG00000138759.20	Distal intron
chr18	79,365,672	79,365,824	+	5.672	4.588	ATP9B	ENSG00000166377.21	Distal intron
chr20	62,937,785	62,937,815	-	4.606	3.386	DIDO1	ENSG00000101191.17	5' UTR
chr4	70,688,941	70,689,049	+	3.055	3.879	UTP3	ENSG00000132467.4	CDS
chr11	66,616,632	66,616,722	+	9.161	4.261	RBM14-RBM4\|RBM14	ENSG00000239306.5\|\|ENSG00000248643.5	CDS
chr20	32,435,076	32,435,131	+	3.127	3.274	ASXL1	ENSG00000171456.21	CDS
chr12	19,440,149	19,440,205	+	3.481	3.874	AEBP2	ENSG00000139154.16	CDS
chr4	165,404,309	165,404,384	+	4.464	4.338	CPE	ENSG00000109472.14	Distal intron
chr20	63,955,399	63,955,468	-	6.659	4.217	UCKL1	ENSG00000198276.16	Distal intron
chr21	45,480,482	45,480,521	+	5.477	3.008	COL18A1	ENSG00000182871.16	CDS
chr2	235,670,511	235,670,588	+	3.481	3.950	AGAP1	ENSG00000157985.20	CDS
chr21	46,139,716	46,139,805	-	9.871	3.247	FTCD	ENSG00000160282.15	Distal intron
chr2	152,390,708	152,390,805	+	8.098	3.253	FMNL2	ENSG00000157827.20	Distal intron
chr7	158,549,413	158,549,485	-	4.898	4.582	PTPRN2	ENSG00000155093.19	Distal intron
chr17	82,005,079	82,005,092	+	3.078	4.103	ASPSCR1	ENSG00000169696.16	Distal intron
chr10	100,988,653	100,988,739	+	5.377	3.573	TWNK	ENSG00000107815.10	CDS
chr1	2,228,820	2,228,949	+	7.677	4.160	SKI	ENSG00000157933.10	CDS
chr6	3,320,043	3,320,100	-	4.120	4.497	SLC22A23	ENSG00000137266.15	Distal intron
chr2	200,370,017	200,370,137	+	4.120	4.097	SPATS2L	ENSG00000196141.14	Distal intron
chr20	63,679,893	63,679,947	+	4.639	4.431	RTEL1	ENSG00000258366.12	CDS
chr3	197,607,443	197,607,586	-	7.330	4.863	SDHAP4	ENSG00000214135.10	ncRNA
chr7	157,838,298	157,838,400	-	4.141	3.385	PTPRN2	ENSG00000155093.19	Distal intron
chr22	28,884,850	28,884,941	+	5.841	3.257	ZNRF3	ENSG00000183579.16	Distal intron
chr4	1,319,527	1,319,713	+	3.285	4.012	MAEA	ENSG00000090316.16	Distal intron
chr16	81,517,851	81,517,899	+	10.246	4.604	ENSG00000279476	ENSG00000279476.1	ncRNA
chr16	81,517,758	81,517,851	+	12.709	4.347	ENSG00000279476	ENSG00000279476.1	ncRNA
chr4	1,233,971	1,234,046	-	3.661	3.159	CTBP1	ENSG00000159692.17	Distal intron
chr21	45,498,940	45,498,999	+	3.055	3.945	COL18A1	ENSG00000182871.16	Distal intron
chr17	77,432,771	77,432,839	+	4.697	4.287	SEPTIN9	ENSG00000184640.20	Distal intron
chr14	22,981,633	22,981,682	-	3.184	3.445	AJUBA	ENSG00000129474.16	CDS
chr17	17,836,816	17,836,915	-	3.339	4.410	SREBF1	ENSG00000072310.18	CDS
chr3	184,378,401	184,378,452	+	8.745	3.546	ENSG00000289500	ENSG00000289500.2	ncRNA
chr7	158,405,967	158,406,038	-	3.078	4.255	PTPRN2	ENSG00000155093.19	Distal intron
chr16	22,325,858	22,325,929	+	7.885	3.731	POLR3E	ENSG00000058600.16	CDS
chr16	67,144,124	67,144,197	+	3.342	3.048	PHAF1	ENSG00000125149.12	3' splice site
chr17	57,532,008	57,532,153	+	3.554	3.310	ENSG00000280028	ENSG00000280028.1	ncRNA
chr17	77,458,947	77,459,027	+	3.733	4.017	SEPTIN9	ENSG00000184640.20	Distal intron
chr11	120,219,671	120,219,771	+	6.414	3.351	OAF	ENSG00000184232.9	Distal intron
chr15	50,355,622	50,355,701	+	5.149	4.441	GABPB1-AS1	ENSG00000244879.10	ncRNA
chr1	2,193,739	2,193,848	-	3.078	4.164	FAAP20	ENSG00000162585.17	CDS
chr7	29,212,912	29,212,971	+	5.414	4.688	NANOGP4	ENSG00000237065.2	ncRNA
chr3	32,259,754	32,259,861	+	4.381	3.305	KRT18P15	ENSG00000234737.1	ncRNA
chr5	178,231,779	178,231,854	-	7.252	3.325	PHYKPL	ENSG00000175309.15	CDS
chr19	56,814,676	56,814,686	-	19.718	4.107	PEG3	ENSG00000198300.14	CDS
chr17	20,908,521	20,908,660	+	6.403	3.903	CCDC144NL-AS1	ENSG00000233098.10	ncRNA
chr6	158,568,048	158,568,132	+	5.479	3.283	TMEM181	ENSG00000146433.10	Distal intron
chr17	39,461,542	39,461,613	+	3.184	3.136	CDK12	ENSG00000167258.15	5' UTR
chr1	2,240,831	2,240,894	+	3.422	3.097	SKI	ENSG00000157933.10	Distal intron
chr16	16,154,685	16,154,787	-	5.672	4.874	ABCC6	ENSG00000091262.17	CDS
chr3	41,238,033	41,238,076	+	4.381	3.629	CTNNB1	ENSG00000168036.18	CDS
chr17	6,915,378	6,915,463	+	6.914	3.869	ALOX12P2	ENSG00000262943.9	ncRNA
chr11	68,043,569	68,043,634	+	3.901	3.353	TCIRG1	ENSG00000110719.11	CDS
chr14	20,995,174	20,995,236	+	5.672	4.953	METTL17	ENSG00000165792.18	CDS
chr17	46,959,903	46,959,997	+	6.959	4.755	GOSR2	ENSG00000108433.17	Distal intron
chr16	10,468,502	10,468,580	+	3.860	4.136	ATF7IP2	ENSG00000166669.14	Distal intron
chr19	879,297	879,358	-	3.777	3.413	MED16	ENSG00000175221.16	Distal intron
chr7	26,193,629	26,193,663	-	10.561	4.140	HNRNPA2B1	ENSG00000122566.22	CDS
chr7	26,193,663	26,193,696	-	11.441	3.861	HNRNPA2B1	ENSG00000122566.22	CDS
chr7	26,193,575	26,193,629	-	11.581	3.824	HNRNPA2B1	ENSG00000122566.22	CDS
chr5	132,760,861	132,760,963	-	3.339	3.799	SEPTIN8	ENSG00000164402.14	CDS
chrX	133,929,423	133,929,476	-	13.883	4.059	GPC3	ENSG00000147257.16	Distal intron
chr1	153,645,073	153,645,154	+	6.718	3.119	CHTOP	ENSG00000160679.13	CDS
chr2	38,297,648	38,297,732	-	4.526	3.040	ATL2	ENSG00000119787.14	Proximal intron
chr8	17,902,955	17,902,989	-	6.655	3.943	FGL1	ENSG00000104760.17	Distal intron
chr8	17,902,989	17,903,020	-	3.773	3.542	FGL1	ENSG00000104760.17	Distal intron
chr2	100,878,307	100,878,365	+	4.461	3.617	NPAS2	ENSG00000170485.17	Distal intron
chr2	100,878,365	100,878,431	+	5.402	3.330	NPAS2	ENSG00000170485.17	Distal intron
chr11	2,657,944	2,658,003	-	6.982	3.985	KCNQ1OT1	ENSG00000269821.1	ncRNA
chr8	123,396,350	123,396,432	-	4.011	3.086	ATAD2	ENSG00000156802.13	CDS
chr8	140,902,221	140,902,325	-	4.141	3.517	PTK2	ENSG00000169398.20	Distal intron
chr14	39,266,729	39,266,791	+	13.385	5.229	MIA2	ENSG00000150527.18	Proximal intron
chr14	39,266,678	39,266,729	+	16.103	4.496	MIA2	ENSG00000150527.18	Proximal intron
chr9	114,275,705	114,275,768	+	6.620	3.064	COL27A1	ENSG00000196739.15	CDS
chr2	74,482,601	74,482,695	-	4.381	3.494	CCDC142	ENSG00000135637.14	CDS
chr2	100,865,737	100,865,857	+	14.536	4.429	NPAS2	ENSG00000170485.17	Distal intron
chr3	66,038,017	66,038,118	-	10.115	3.724	MAGI1	ENSG00000151276.24	CDS
chr14	23,067,925	23,067,983	-	7.431	3.288	ACIN1	ENSG00000100813.15	Distal intron
chr7	158,557,142	158,557,228	-	11.916	4.120	PTPRN2	ENSG00000155093.19	Distal intron
chr1	2,240,309	2,240,364	+	3.127	3.250	SKI	ENSG00000157933.10	Distal intron
chr17	28,749,029	28,749,108	+	3.860	4.205	TRAF4	ENSG00000076604.16	CDS
chr12	26,656,306	26,656,385	-	3.945	3.037	ITPR2	ENSG00000123104.12	CDS
chr4	1,233,438	1,233,526	-	7.660	4.113	CTBP1	ENSG00000159692.17	Distal intron
chr9	114,290,280	114,290,330	+	8.652	3.652	COL27A1	ENSG00000196739.15	CDS
chr9	128,693,962	128,694,017	+	5.598	4.768	SET	ENSG00000119335.18	CDS
chr9	128,694,018	128,694,042	+	4.312	3.709	SET	ENSG00000119335.18	CDS
chr16	515,572	515,676	+	3.339	4.544	RAB11FIP3	ENSG00000090565.17	Distal intron
chr3	172,274,360	172,274,486	+	4.225	4.403	FNDC3B	ENSG00000075420.13	Distal intron
chr7	100,215,199	100,215,275	-	3.982	4.144	CASTOR3	ENSG00000239521.11	ncRNA
chr2	75,541,062	75,541,130	+	3.055	3.727	EVA1A-AS	ENSG00000231172.2	ncRNA
chr2	207,769,263	207,769,314	-	3.422	3.284	FZD5	ENSG00000163251.4	5' UTR
chr13	112,838,712	112,838,771	+	3.078	3.755	ATP11A	ENSG00000068650.19	Distal intron
chr14	104,873,440	104,873,510	+	3.982	4.436	CEP170B	ENSG00000099814.17	Distal intron
chr9	124,344,824	124,344,951	+	6.414	3.634	NEK6	ENSG00000119408.17	Distal intron
chr14	24,151,248	24,151,332	+	4.862	3.827	RNF31	ENSG00000092098.18	CDS
chr3	196,967,251	196,967,356	-	7.508	5.388	PIGZ	ENSG00000119227.8	Distal intron
chr6	131,827,811	131,827,946	+	9.715	5.202	ENPP1	ENSG00000197594.14	Distal intron
chr2	100,877,010	100,877,069	+	3.339	3.925	NPAS2	ENSG00000170485.17	Distal intron
chr13	112,843,935	112,844,019	+	5.891	4.558	ATP11A	ENSG00000068650.19	Distal intron
chr7	23,414,776	23,414,825	-	3.542	3.171	IGF2BP3	ENSG00000136231.14	Distal intron
chr20	62,911,412	62,911,503	-	4.250	3.064	DIDO1	ENSG00000101191.17	CDS
chr9	114,282,276	114,282,282	+	4.381	3.374	COL27A1	ENSG00000196739.15	CDS
chrX	2,489,145	2,489,258	-	3.901	3.393	ZBED1	ENSG00000214717.12	CDS
chr16	1,316,873	1,316,930	+	4.120	4.149	UBE2I	ENSG00000103275.21	Distal intron
chr17	55,294,627	55,294,695	+	5.692	3.374	HLF	ENSG00000108924.14	Distal intron
chr17	55,294,695	55,294,785	+	5.479	3.283	HLF	ENSG00000108924.14	Distal intron
chr17	29,103,593	29,103,673	-	4.011	3.020	MYO18A	ENSG00000196535.19	CDS
chr16	88,496,333	88,496,385	+	3.055	3.975	ZFPM1	ENSG00000179588.9	Distal intron
chr11	65,500,521	65,500,527	+	4.767	3.026	MALAT1	ENSG00000251562.10	ncRNA
chr16	75,264,342	75,264,379	-	3.078	3.851	BCAR1	ENSG00000050820.17	CDS
chr4	9,879,969	9,880,040	-	4.896	3.789	SLC2A9	ENSG00000109667.12	Distal intron
chr17	28,747,221	28,747,287	+	3.661	3.320	TRAF4	ENSG00000076604.16	CDS
chr16	31,708,132	31,708,234	+	7.399	3.511	CLUHP3	ENSG00000131797.13	ncRNA
chr2	3,322,706	3,322,792	-	5.672	4.671	EIPR1	ENSG00000032389.13	Distal intron
chr16	84,182,208	84,182,341	-	3.661	3.659	TAF1C	ENSG00000103168.17	CDS
chr2	62,855,883	62,855,936	+	4.225	4.203	EHBP1	ENSG00000115504.15	Distal intron
chr12	26,651,703	26,651,779	-	4.380	4.159	ITPR2	ENSG00000123104.12	Distal intron
chr6	2,272,633	2,272,691	+	3.599	4.021	GMDS-DT	ENSG00000250903.11	ncRNA
chr2	3,468,834	3,468,935	+	3.342	3.012	TRAPPC12	ENSG00000171853.16	Distal intron
chr7	158,406,394	158,406,492	-	4.120	4.527	PTPRN2	ENSG00000155093.19	Distal intron
chr7	158,556,686	158,556,738	-	6.684	5.036	PTPRN2	ENSG00000155093.19	Distal intron
chr12	50,505,213	50,505,282	+	5.119	3.799	DIP2B	ENSG00000066084.13	CDS
chr6	30,665,179	30,665,247	-	3.285	3.764	DHX16	ENSG00000204560.10	CDS
chr7	158,429,216	158,429,394	-	3.536	3.266	PTPRN2	ENSG00000155093.19	Distal intron
chr16	89,522,313	89,522,361	+	3.599	4.249	SPG7	ENSG00000197912.16	Distal intron
chr16	21,979,123	21,979,193	+	4.862	3.682	UQCRC2	ENSG00000140740.11	Distal intron
chr8	120,806,871	120,807,041	-	10.702	4.112	SNTB1	ENSG00000172164.15	Distal intron
chr6	1,915,432	1,915,523	-	3.422	3.173	GMDS	ENSG00000112699.11	Distal intron
chr1	2,229,066	2,229,138	+	3.860	4.112	SKI	ENSG00000157933.10	CDS
chr8	93,734,367	93,734,455	-	12.875	5.498	RBM12B	ENSG00000183808.12	CDS
chr8	93,734,282	93,734,367	-	10.977	5.358	RBM12B	ENSG00000183808.12	CDS
chr8	93,734,455	93,734,587	-	19.075	4.964	RBM12B	ENSG00000183808.12	CDS
chr17	76,383,411	76,383,454	+	3.860	4.288	SPHK1	ENSG00000176170.14	Distal intron
chr1	147,213,223	147,213,288	-	5.692	3.242	FMO5	ENSG00000131781.13	5' splice site
chr17	76,293,213	76,293,286	-	3.510	3.879	QRICH2	ENSG00000129646.16	CDS
chr22	24,041,210	24,041,271	+	7.371	3.517	CABIN1	ENSG00000099991.18	CDS
chr14	19,098,441	19,098,486	+	3.422	3.450	DUXAP9	ENSG00000225210.10	ncRNA
chr14	23,565,582	23,565,631	-	4.381	3.895	AP1G2	ENSG00000213983.12	CDS
chr16	89,981,770	89,981,852	+	3.285	3.844	AFG3L1P	ENSG00000223959.10	ncRNA
chr6	52,362,950	52,363,027	+	4.237	3.532	PAQR8	ENSG00000170915.9	Proximal intron
chr17	80,919,553	80,919,632	+	3.599	3.994	RPTOR	ENSG00000141564.16	Distal intron
chr9	114,288,700	114,288,743	+	6.362	3.102	COL27A1	ENSG00000196739.15	CDS
chr2	71,130,642	71,130,746	+	3.661	3.255	MPHOSPH10	ENSG00000124383.11	CDS
chr6	3,319,912	3,320,023	-	28.334	5.617	SLC22A23	ENSG00000137266.15	Distal intron
chr19	18,515,310	18,515,394	-	3.078	3.988	ELL	ENSG00000105656.13	Distal intron
chr21	15,064,733	15,064,791	-	5.377	3.865	NRIP1	ENSG00000180530.11	5' UTR
chr7	97,868,946	97,869,026	-	4.141	3.250	ASNS	ENSG00000070669.17	CDS
chr11	61,268,920	61,269,005	-	10.454	5.327	VWCE	ENSG00000167992.14	CDS
chr22	46,289,478	46,289,557	+	3.184	3.160	TTC38	ENSG00000075234.17	CDS
chr6	33,272,219	33,272,275	+	3.860	4.624	RPS18	ENSG00000231500.7	5' splice site
chr18	58,045,180	58,045,231	+	6.696	5.454	NEDD4L	ENSG00000049759.20	3' UTR
chr17	42,117,791	42,117,814	-	3.184	3.326	KAT2A	ENSG00000108773.11	CDS
chr6	169,667,921	169,668,083	-	4.775	3.115	WDR27	ENSG00000184465.16	CDS
chr1	3,540,642	3,540,710	-	3.860	4.005	MEGF6	ENSG00000162591.17	Distal intron
chr16	24,794,583	24,794,645	+	3.285	4.242	TNRC6A	ENSG00000090905.19	CDS
chrUn_GL000218v1	53,806	53,913	-	8.907	3.826	nan	nan	Intergenic
chr5	178,231,643	178,231,691	-	3.078	3.720	PHYKPL	ENSG00000175309.15	CDS
chr20	62,819,942	62,819,983	+	14.299	3.627	COL9A3	ENSG00000092758.18	CDS
chr8	17,903,790	17,903,836	-	9.230	3.765	FGL1	ENSG00000104760.17	Distal intron
chr1	12,586,384	12,586,488	-	3.554	3.111	DHRS3	ENSG00000162496.9	Distal intron
chr2	61,178,841	61,178,958	+	19.595	3.859	AHSA2P	ENSG00000173209.23	ncRNA
chr10	68,075,006	68,075,138	-	3.422	3.497	HERC4	ENSG00000148634.16	5' splice site
chr17	75,205,692	75,205,806	+	3.599	4.436	NUP85	ENSG00000125450.11	CDS
chr17	82,255,101	82,255,148	-	4.381	3.416	CSNK1D	ENSG00000141551.15	Proximal intron
chrX	2,486,941	2,487,019	-	5.841	3.277	ZBED1	ENSG00000214717.12	3' UTR
chr20	25,476,941	25,477,019	-	9.170	4.574	NINL	ENSG00000101004.15	CDS
chr20	25,477,019	25,477,081	-	6.034	3.252	NINL	ENSG00000101004.15	CDS
chr14	24,431,666	24,431,803	+	4.848	3.036	KHNYN	ENSG00000100441.10	CDS
chr20	2,840,315	2,840,377	-	4.250	3.305	PCED1A	ENSG00000132635.17	5' UTR
chr4	9,880,058	9,880,145	-	3.510	3.951	SLC2A9	ENSG00000109667.12	Distal intron
chr6	31,889,467	31,889,528	-	3.285	4.416	EHMT2	ENSG00000204371.12	CDS
chr12	109,588,065	109,588,219	+	4.461	3.597	MVK	ENSG00000110921.14	Distal intron
chr2	111,238,579	111,238,674	-	3.339	3.895	MIR4435-2HG	ENSG00000172965.17	ncRNA

ENCSR381VNR (K562) Peaks

Chromosome	Peak start	Peak stop	Strand	-log₁₀(p-value)	log₂(fold change)	Gene name	Ensembl ID	Feature
chr1	1,599,903	1,600,074	-	8.283	4.787	FNDC10	ENSG00000228594.4	CDS
chr1	2,194,682	2,194,766	-	5.376	3.174	FAAP20	ENSG00000162585.17	CDS
chr1	6,199,561	6,199,595	-	4.336	3.236	RPL22	ENSG00000116251.11	CDS
chr1	11,059,869	11,060,012	-	12.392	3.108	SRM	ENSG00000116649.10	CDS
chr1	11,681,048	11,681,141	-	5.539	3.190	MAD2L2	ENSG00000116670.16	5' UTR
chr1	20,661,314	20,661,389	-	3.116	4.296	DDOST	ENSG00000244038.11	CDS
chr1	30,968,162	30,968,206	-	17.792	4.401	PUM1	ENSG00000134644.16	Proximal intron
chr1	30,968,206	30,968,226	-	15.748	4.157	PUM1	ENSG00000134644.16	Proximal intron
chr1	30,968,226	30,968,236	-	17.413	4.566	PUM1	ENSG00000134644.16	Proximal intron
chr1	31,938,303	31,938,369	-	6.177	3.061	PTP4A2	ENSG00000184007.22	5' UTR
chr1	44,776,490	44,776,535	+	9.452	3.181	SNORD46	ENSG00000200913.1	ncRNA
chr1	47,333,799	47,333,856	+	13.078	5.407	CMPK1	ENSG00000162368.15	5' UTR
chr1	47,333,856	47,333,951	+	9.777	3.559	CMPK1	ENSG00000162368.15	CDS
chr1	51,973,417	51,973,453	+	8.023	3.471	RNA5SP48	ENSG00000200839.1	ncRNA
chr1	91,387,496	91,387,597	-	7.287	4.105	HFM1	ENSG00000162669.16	Distal intron
chr1	148,388,572	148,388,589	-	3.219	3.466	RNVU1-2	ENSG00000238825.1	ncRNA
chr1	148,388,597	148,388,624	-	3.219	3.466	RNVU1-2	ENSG00000238825.1	ncRNA
chr1	155,051,342	155,051,451	+	4.433	3.006	ADAM15	ENSG00000143537.14	CDS
chr1	202,958,203	202,958,301	-	5.116	3.765	ADIPOR1	ENSG00000159346.13	5' UTR
chr1	206,685,106	206,685,198	+	6.269	3.756	MAPKAPK2	ENSG00000162889.11	5' UTR
chr1	212,432,906	212,433,015	+	4.336	3.780	NENF	ENSG00000117691.10	CDS
chr1	237,603,152	237,603,250	+	13.780	5.797	RYR2	ENSG00000198626.18	Distal intron
chr10	282,021	282,051	-	6.136	4.358	RNA5SP298	ENSG00000201861.1	ncRNA
chr10	73,252,542	73,252,624	-	4.108	4.262	MRPS16	ENSG00000182180.14	5' UTR
chr10	100,347,150	100,347,249	+	10.887	3.190	SCD	ENSG00000099194.6	5' UTR
chr10	101,793,651	101,793,739	-	3.890	3.327	OGA	ENSG00000198408.14	Proximal intron
chr10	131,981,852	131,981,951	-	3.775	3.387	BNIP3	ENSG00000176171.12	5' UTR
chr11	280,583	280,604	+	3.898	3.659	NLRP6	ENSG00000174885.13	CDS
chr11	5,269,880	5,269,944	-	19.854	4.664	HBE1	ENSG00000213931.7	CDS
chr11	62,252,197	62,252,207	-	56.130	7.387	ENSG00000254404	ENSG00000254404.1	ncRNA
chr11	62,252,207	62,252,222	-	56.130	7.387	ENSG00000254404	ENSG00000254404.1	ncRNA
chr11	62,609,649	62,609,698	-	6.820	4.864	EML3	ENSG00000149499.12	CDS
chr11	63,813,447	63,813,623	+	4.206	4.091	SPINDOC	ENSG00000168005.9	5' UTR
chr11	64,246,600	64,246,676	-	5.663	3.291	PPP1R14B	ENSG00000173457.11	CDS
chr11	64,246,676	64,246,751	-	7.058	3.659	PPP1R14B	ENSG00000173457.11	5' UTR
chr11	64,246,757	64,246,832	-	19.805	4.702	PPP1R14B	ENSG00000173457.11	5' UTR
chr11	64,246,832	64,246,884	-	12.279	4.400	PPP1R14B	ENSG00000173457.11	5' UTR
chr11	65,854,868	65,854,966	-	3.320	3.505	CFL1	ENSG00000172757.13	3' UTR
chr11	65,858,097	65,858,208	-	7.852	4.604	CFL1	ENSG00000172757.13	CDS
chr11	65,890,651	65,890,773	+	9.288	4.148	CCDC85B	ENSG00000175602.4	5' UTR
chr11	72,781,671	72,781,825	-	3.200	3.200	STARD10	ENSG00000214530.10	5' UTR
chr11	75,400,388	75,400,396	+	12.560	3.661	SNORD15A	ENSG00000206941.1	ncRNA
chr11	75,400,396	75,400,455	+	12.681	3.037	RPS3	ENSG00000149273.15	5' UTR
chr11	77,886,573	77,886,667	+	7.163	4.498	AAMDC	ENSG00000087884.16	Distal intron
chr11	93,721,829	93,721,866	+	5.762	3.003	SCARNA9\|ENSG00000273885	ENSG00000254911.3\|\|ENSG00000273885.1	ncRNA
chr11	102,437,053	102,437,063	-	44.177	8.239	TMEM123	ENSG00000152558.15	Distal intron
chr11	102,437,069	102,437,076	-	44.177	8.239	TMEM123	ENSG00000152558.15	Distal intron
chr11	118,401,593	118,401,672	+	3.320	3.433	ENSG00000285827\|ATP5MG	ENSG00000285827.1\|\|ENSG00000167283.9	CDS
chr11	124,636,471	124,636,486	+	3.086	3.577	RNA5SP352	ENSG00000200278.1	ncRNA
chr11	124,636,486	124,636,503	+	4.622	3.088	RNA5SP352	ENSG00000200278.1	ncRNA
chr11	125,569,477	125,569,567	+	5.539	4.136	EI24	ENSG00000149547.15	5' UTR
chr12	1,831,250	1,831,257	-	31.325	6.027	CACNA2D4	ENSG00000151062.15	Distal intron
chr12	1,831,257	1,831,268	-	31.325	6.027	CACNA2D4	ENSG00000151062.15	Distal intron
chr12	1,831,268	1,831,272	-	31.325	6.027	CACNA2D4	ENSG00000151062.15	Distal intron
chr12	6,766,360	6,766,410	+	14.777	3.944	PTMS	ENSG00000159335.18	5' UTR
chr12	6,766,410	6,766,431	+	15.048	3.780	PTMS	ENSG00000159335.18	5' UTR
chr12	13,046,221	13,046,254	+	12.727	5.825	FAM234B	ENSG00000084444.14	Distal intron
chr12	49,131,298	49,131,373	-	10.375	3.392	TUBA1B	ENSG00000123416.15	CDS
chr12	49,131,373	49,131,396	-	5.116	4.573	TUBA1B	ENSG00000123416.15	5' UTR
chr12	49,265,078	49,265,122	+	5.373	3.927	TUBA1C	ENSG00000167553.17	5' UTR
chr12	79,735,089	79,735,099	+	8.450	5.766	PPP1R12A-AS2	ENSG00000258048.1	ncRNA
chr12	79,735,101	79,735,115	+	8.450	5.766	PPP1R12A-AS2	ENSG00000258048.1	ncRNA
chr12	99,083,854	99,083,906	-	3.558	3.858	RNA5SP366	ENSG00000202324.1	ncRNA
chr12	104,125,301	104,125,332	+	8.952	4.487	RNA5SP370	ENSG00000199415.1	ncRNA
chr12	108,562,606	108,562,733	+	5.116	4.678	ISCU	ENSG00000136003.16	CDS
chr12	111,645,640	111,645,666	-	5.279	5.162	BRAP	ENSG00000089234.16	Distal intron
chr12	118,061,036	118,061,182	-	5.132	3.499	WSB2	ENSG00000176871.9	CDS
chr12	132,687,614	132,687,714	+	6.794	3.369	PXMP2	ENSG00000176894.10	CDS
chr13	27,255,129	27,255,136	+	7.265	3.183	SNORD102	ENSG00000207500.1	ncRNA
chr13	27,424,640	27,424,748	+	37.144	5.630	GTF3A	ENSG00000122034.17	CDS
chr13	113,491,017	113,491,111	+	5.843	3.842	TMCO3	ENSG00000150403.18	5' UTR
chr14	36,085,281	36,085,312	+	3.558	4.651	LINC00609	ENSG00000257585.1	ncRNA
chr14	49,586,292	49,586,376	-	3.744	3.025	RPS29	ENSG00000213741.11	CDS
chr14	69,260,060	69,260,085	-	3.898	4.209	ENSG00000258520	ENSG00000258520.1	ncRNA
chr14	106,636,739	106,636,769	+	5.843	3.834	RNA5SP389	ENSG00000199480.1	ncRNA
chr15	43,793,905	43,793,962	+	17.567	3.157	SERF2	ENSG00000140264.21	CDS
chr15	43,793,962	43,793,993	+	8.121	3.469	SERF2	ENSG00000140264.21	CDS
chr15	95,784,693	95,784,726	+	6.008	3.036	tRX-Lys-NNN-3-1	tRX-Lys-NNN-3-1	tRNA
chr15	101,489,737	101,489,821	-	3.277	3.416	PCSK6	ENSG00000140479.18	5' UTR
chr16	397,195	397,218	+	36.511	7.198	NME4	ENSG00000103202.13	5' UTR
chr16	397,218	397,241	+	48.104	7.331	NME4	ENSG00000103202.13	CDS
chr16	397,252	397,270	+	30.554	5.768	NME4	ENSG00000103202.13	CDS
chr16	397,270	397,310	+	22.944	4.811	NME4	ENSG00000103202.13	CDS
chr16	398,988	399,067	+	7.052	3.236	NME4	ENSG00000103202.13	CDS
chr16	641,921	642,002	+	3.669	3.762	MCRIP2	ENSG00000172366.20	CDS
chr16	715,121	715,296	+	20.309	4.305	METRN	ENSG00000103260.9	CDS
chr16	1,978,677	1,978,684	+	4.246	4.771	TBL3	ENSG00000183751.16	CDS
chr16	1,978,684	1,978,697	+	5.279	5.271	TBL3	ENSG00000183751.16	CDS
chr16	18,790,289	18,790,338	-	3.615	3.443	RPS15A	ENSG00000134419.15	5' UTR
chr16	29,962,090	29,962,135	+	3.911	3.782	TMEM219	ENSG00000149932.17	5' UTR
chr16	29,963,106	29,963,153	+	4.795	3.821	TMEM219	ENSG00000149932.17	CDS
chr16	30,737,965	30,738,064	+	4.108	4.212	SRCAP	ENSG00000080603.17	CDS
chr16	56,425,413	56,425,496	-	5.237	3.168	AMFR	ENSG00000159461.15	5' UTR
chr16	67,192,170	67,192,277	+	18.487	4.904	E2F4	ENSG00000205250.9	CDS
chr16	68,742,548	68,742,571	+	11.312	3.538	RNA5SP429	ENSG00000200558.1	ncRNA
chr16	73,478,307	73,478,354	-	3.669	3.916	tRNA-Lys-TTT-1-1	tRNA-Lys-TTT-1-1	tRNA
chr16	85,572,464	85,572,606	+	15.700	4.457	GSE1	ENSG00000131149.19	Distal intron
chr16	88,811,858	88,811,914	-	3.378	3.309	APRT	ENSG00000198931.11	CDS
chr16	90,019,398	90,019,560	-	3.116	4.396	DBNDD1	ENSG00000003249.15	5' UTR
chr17	7,561,932	7,562,028	+	6.820	4.881	SENP3	ENSG00000161956.13	5' UTR
chr17	8,226,598	8,226,631	-	27.951	4.320	tRNA-Ser-AGA-2-6	tRNA-Ser-AGA-2-6	tRNA
chr17	8,226,634	8,226,643	-	17.178	4.022	tRNA-Ser-AGA-2-6	tRNA-Ser-AGA-2-6	tRNA
chr17	28,722,582	28,722,588	+	26.951	3.100	SNORD4A	ENSG00000238578.1	ncRNA
chr17	28,897,622	28,897,670	-	7.407	4.133	FLOT2	ENSG00000132589.16	5' UTR
chr17	41,718,153	41,718,197	+	18.398	5.376	RNA5SP442	ENSG00000201920.1	ncRNA
chr17	43,387,329	43,387,383	-	3.444	4.459	RNU2-4P\|LINC00910	ENSG00000277084.1\|\|ENSG00000188825.16	ncRNA
chr17	50,383,185	50,383,233	-	3.086	3.255	LRRC59	ENSG00000108829.10	CDS
chr17	77,089,305	77,089,314	+	34.041	4.297	hsa-mir-6516	MI0025513	miRNA
chr17	77,089,353	77,089,365	+	400.000	3.558	hsa-mir-6516	MI0025513	miRNA
chr17	77,089,365	77,089,371	+	400.000	3.569	hsa-mir-6516	MI0025513	miRNA
chr17	77,089,371	77,089,377	+	400.000	3.327	hsa-mir-6516	MI0025513	miRNA
chr17	77,089,377	77,089,385	+	400.000	3.291	hsa-mir-6516	MI0025513	miRNA
chr17	77,089,385	77,089,393	+	400.000	3.269	hsa-mir-6516	MI0025513	miRNA
chr17	77,089,395	77,089,399	+	400.000	3.307	hsa-mir-6516	MI0025513	miRNA
chr18	812,201	812,232	-	5.478	3.056	YES1	ENSG00000176105.14	5' UTR
chr18	812,232	812,244	-	4.073	3.190	YES1	ENSG00000176105.14	5' UTR
chr18	9,614,493	9,614,721	-	4.039	3.151	PPP4R1	ENSG00000154845.16	5' UTR
chr18	36,828,907	36,829,000	-	5.395	3.539	TPGS2	ENSG00000134779.15	5' UTR
chr19	3,062,214	3,062,281	-	4.866	3.463	TLE5	ENSG00000104964.15	5' UTR
chr19	3,062,486	3,062,540	-	3.444	3.727	TLE5	ENSG00000104964.15	5' UTR
chr19	8,886,486	8,886,490	-	7.740	5.622	MUC16	ENSG00000181143.15	CDS
chr19	8,886,490	8,886,500	-	7.740	5.622	MUC16	ENSG00000181143.15	CDS
chr19	8,886,500	8,886,509	-	7.740	5.622	MUC16	ENSG00000181143.15	CDS
chr19	9,827,911	9,828,002	+	4.443	3.828	UBL5	ENSG00000198258.11	5' UTR
chr19	14,433,320	14,433,386	+	26.660	4.269	PKN1	ENSG00000123143.13	5' UTR
chr19	14,433,386	14,433,469	+	30.780	4.238	PKN1	ENSG00000123143.13	5' UTR
chr19	14,433,469	14,433,507	+	3.414	3.031	PKN1	ENSG00000123143.13	5' UTR
chr19	30,313,236	30,313,243	+	58.130	5.369	ZNF536	ENSG00000198597.9	Distal intron
chr19	30,313,243	30,313,254	+	58.130	5.369	ZNF536	ENSG00000198597.9	Distal intron
chr19	30,313,254	30,313,258	+	58.130	5.369	ZNF536	ENSG00000198597.9	Distal intron
chr19	34,428,374	34,428,437	+	12.619	3.071	UBA2	ENSG00000126261.13	CDS
chr19	44,891,236	44,891,315	+	6.147	3.273	TOMM40	ENSG00000130204.13	5' UTR
chr19	46,601,269	46,601,367	+	8.704	3.510	CALM3	ENSG00000160014.17	5' UTR
chr19	47,609,000	47,609,014	+	9.876	5.519	BICRA	ENSG00000063169.12	Distal intron
chr19	47,609,022	47,609,026	+	9.876	5.519	BICRA	ENSG00000063169.12	Distal intron
chr19	52,331,908	52,331,919	-	14.554	6.261	ENSG00000269535	ENSG00000269535.1	ncRNA
chr19	52,331,919	52,331,930	-	14.554	6.261	ENSG00000269535	ENSG00000269535.1	ncRNA
chr19	55,407,693	55,407,775	-	11.165	3.106	UBE2S	ENSG00000108106.14	5' UTR
chr19	56,121,169	56,121,254	-	3.320	3.177	ZNF787	ENSG00000142409.6	5' UTR
chr2	27,051,660	27,051,690	+	4.443	4.858	AGBL5	ENSG00000084693.16	5' UTR
chr2	27,051,690	27,051,766	+	7.950	4.686	AGBL5	ENSG00000084693.16	5' UTR
chr2	53,970,710	53,970,809	-	5.071	3.470	PSME4	ENSG00000068878.15	CDS
chr2	74,147,820	74,147,912	-	11.706	4.275	BOLA3	ENSG00000163170.12	CDS
chr2	81,496,283	81,496,291	-	4.241	4.338	RNA5SP99	ENSG00000200890.1	ncRNA
chr2	81,496,291	81,496,320	-	4.241	4.601	RNA5SP99	ENSG00000200890.1	ncRNA
chr2	97,646,101	97,646,186	+	4.108	3.746	COX5B	ENSG00000135940.7	CDS
chr2	126,656,477	126,656,485	+	7.018	3.507	GYPC	ENSG00000136732.16	Proximal intron
chr2	126,656,490	126,656,501	+	6.709	3.481	GYPC	ENSG00000136732.16	Proximal intron
chr2	201,451,753	201,451,861	+	3.026	3.392	STRADB	ENSG00000082146.13	5' UTR
chr2	202,276,437	202,276,512	+	5.439	3.101	SNORD70	ENSG00000212534.1	ncRNA
chr2	218,959,730	218,959,750	+	16.002	6.226	CDK5R2	ENSG00000171450.6	5' UTR
chr2	218,959,750	218,959,757	+	16.002	6.226	CDK5R2	ENSG00000171450.6	5' UTR
chr2	229,180,775	229,180,781	-	4.241	4.570	PID1	ENSG00000153823.19	Distal intron
chr2	229,180,781	229,180,787	-	23.326	6.554	PID1	ENSG00000153823.19	Distal intron
chr2	229,180,787	229,180,796	-	23.681	6.574	PID1	ENSG00000153823.19	Distal intron
chr2	229,180,798	229,180,810	-	22.616	6.552	PID1	ENSG00000153823.19	Distal intron
chr2	229,180,857	229,180,911	-	9.162	5.262	PID1	ENSG00000153823.19	Distal intron
chr2	229,180,911	229,180,957	-	41.393	6.847	PID1	ENSG00000153823.19	Distal intron
chr2	229,180,957	229,180,992	-	35.023	6.673	PID1	ENSG00000153823.19	Distal intron
chr2	229,180,992	229,181,000	-	16.597	6.168	PID1	ENSG00000153823.19	Distal intron
chr20	32,008,385	32,008,443	+	20.645	4.530	RNA5SP481	ENSG00000252623.1	ncRNA
chr20	49,280,687	49,280,690	+	23.330	3.135	ZFAS1\|SNORD12	ENSG00000177410.13\|\|ENSG00000212304.1	ncRNA
chr20	49,280,690	49,280,699	+	24.692	3.165	SNORD12\|ZFAS1	ENSG00000177410.13\|\|ENSG00000212304.1	ncRNA
chr20	56,358,976	56,359,175	+	7.360	3.041	FAM210B	ENSG00000124098.10	CDS
chr20	58,891,355	58,891,376	+	6.794	3.775	GNAS	ENSG00000087460.29	5' UTR
chr20	58,891,376	58,891,412	+	15.214	3.086	GNAS	ENSG00000087460.29	5' UTR
chr20	58,891,412	58,891,427	+	14.346	3.139	GNAS	ENSG00000087460.29	5' UTR
chr20	58,891,427	58,891,465	+	17.423	3.158	GNAS	ENSG00000087460.29	5' UTR
chr20	59,032,248	59,032,340	-	5.539	4.351	ATP5F1E	ENSG00000124172.10	CDS
chr20	63,739,761	63,739,863	+	5.671	3.755	SLC2A4RG	ENSG00000125520.14	5' UTR
chr20	63,739,863	63,740,024	+	8.009	3.180	SLC2A4RG	ENSG00000125520.14	CDS
chr21	8,216,305	8,216,397	+	5.455	4.575	ENSG00000278996	ENSG00000278996.1	ncRNA
chr21	8,397,610	8,397,677	+	29.626	3.375	ENSG00000280441	ENSG00000280441.3	ncRNA
chr21	39,349,006	39,349,134	-	16.107	4.088	HMGN1	ENSG00000205581.11	5' UTR
chr21	44,817,961	44,818,057	-	7.597	3.088	SUMO3	ENSG00000184900.16	CDS
chr22	19,941,813	19,941,905	+	3.775	3.324	COMT	ENSG00000093010.15	5' UTR
chr22	23,894,402	23,894,470	+	7.660	3.727	MIF	ENSG00000240972.2	5' UTR
chr3	37,243,268	37,243,351	+	4.843	3.028	GOLGA4	ENSG00000144674.18	5' UTR
chr3	49,902,675	49,902,681	-	5.512	3.828	MST1R	ENSG00000164078.14	CDS
chr3	49,902,681	49,902,695	-	5.512	3.828	MST1R	ENSG00000164078.14	CDS
chr3	52,533,566	52,533,696	-	15.328	3.522	NT5DC2	ENSG00000168268.11	CDS
chr3	52,533,696	52,533,775	-	5.050	3.247	NT5DC2	ENSG00000168268.11	CDS
chr3	129,606,654	129,606,804	-	12.377	4.784	PLXND1	ENSG00000004399.13	5' UTR
chr3	151,188,164	151,188,192	+	39.784	5.016	RNA5SP145	ENSG00000199994.1	ncRNA
chr3	180,161,891	180,161,899	-	25.301	3.898	RNA5SP149	ENSG00000201822.1	ncRNA
chr4	1,871,425	1,871,536	+	9.996	3.086	NSD2	ENSG00000109685.19	5' UTR
chr4	1,956,081	1,956,167	+	9.080	4.405	NSD2	ENSG00000109685.19	CDS
chr4	13,542,438	13,542,443	-	13.083	4.988	NKX3-2	ENSG00000109705.8	CDS
chr4	13,542,443	13,542,453	-	13.083	4.988	NKX3-2	ENSG00000109705.8	CDS
chr4	13,542,453	13,542,469	-	13.083	4.988	NKX3-2	ENSG00000109705.8	CDS
chr4	56,097,478	56,097,486	+	13.787	4.942	RNA5SP161	ENSG00000200741.1	ncRNA
chr4	140,495,026	140,495,042	-	22.548	7.030	MGAT4D	ENSG00000205301.12	Distal intron
chr4	140,495,042	140,495,053	-	22.548	7.030	MGAT4D	ENSG00000205301.12	Distal intron
chr5	80,651,422	80,651,495	-	15.326	3.122	DHFR	ENSG00000228716.7	Distal intron
chr5	130,114,431	130,114,451	+	4.246	3.191	RNA5SP191	ENSG00000199455.1	ncRNA
chr5	131,165,133	131,165,292	-	8.550	3.444	HINT1	ENSG00000169567.13	CDS
chr5	132,866,640	132,866,688	+	4.336	3.058	UQCRQ	ENSG00000164405.11	5' UTR
chr5	132,866,866	132,866,918	+	5.974	3.512	UQCRQ	ENSG00000164405.11	CDS
chr5	134,371,495	134,371,627	+	4.935	3.470	UBE2B	ENSG00000119048.9	CDS
chr5	139,278,778	139,278,781	+	400.000	4.957	SNORA74A	ENSG00000200959.1	ncRNA
chr5	139,278,791	139,278,795	+	400.000	5.132	SNORA74A	ENSG00000200959.1	ncRNA
chr5	139,278,795	139,278,800	+	400.000	5.135	SNORA74A	ENSG00000200959.1	ncRNA
chr5	139,278,824	139,278,831	+	400.000	5.023	SNORA74A	ENSG00000200959.1	ncRNA
chr5	139,278,831	139,278,835	+	400.000	5.022	SNORA74A	ENSG00000200959.1	ncRNA
chr5	168,579,321	168,579,394	-	4.866	3.387	PANK3	ENSG00000120137.7	5' UTR
chr5	168,579,394	168,579,448	-	3.320	3.933	nan	nan	Intergenic
chr5	168,579,451	168,579,553	-	7.058	3.717	nan	nan	Intergenic
chr5	172,006,485	172,006,612	-	3.911	3.101	FBXW11	ENSG00000072803.18	CDS
chr5	180,175,224	180,175,237	-	7.192	4.054	RASGEF1C	ENSG00000146090.16	Distal intron
chr5	180,175,240	180,175,246	-	7.192	4.054	RASGEF1C	ENSG00000146090.16	Distal intron
chr6	10,887,602	10,887,612	+	23.558	4.321	SYCP2L	ENSG00000153157.13	Proximal intron
chr6	10,887,612	10,887,627	+	23.558	4.321	SYCP2L	ENSG00000153157.13	Proximal intron
chr6	30,619,722	30,619,789	+	3.320	4.005	MRPS18B	ENSG00000204568.12	CDS
chr6	30,742,544	30,742,623	-	6.147	3.212	FLOT1	ENSG00000137312.15	5' UTR
chr6	30,742,623	30,742,710	-	8.197	4.527	FLOT1	ENSG00000137312.15	5' UTR
chr6	32,189,992	32,190,063	-	5.539	3.485	PBX2	ENSG00000204304.12	5' UTR
chr6	32,190,134	32,190,175	-	3.444	3.651	PBX2	ENSG00000204304.12	5' UTR
chr6	36,442,968	36,443,099	+	12.587	3.720	KCTD20	ENSG00000112078.14	5' UTR
chr6	41,941,656	41,941,821	-	7.714	3.506	CCND3	ENSG00000112576.13	5' UTR
chr6	43,229,367	43,229,466	-	5.843	3.282	DNPH1	ENSG00000112667.13	CDS
chr6	43,770,207	43,770,263	+	32.541	3.717	VEGFA	ENSG00000112715.26	5' UTR
chr6	43,770,263	43,770,276	+	32.202	3.780	VEGFA	ENSG00000112715.26	5' UTR
chr6	44,247,101	44,247,143	+	5.071	3.309	HSP90AB1	ENSG00000096384.20	5' UTR
chr6	125,301,857	125,302,029	-	3.775	4.209	HDDC2	ENSG00000111906.18	CDS
chr6	125,979,890	125,979,892	-	400.000	4.531	RNA5SP216	ENSG00000251920.1	ncRNA
chr6	125,979,892	125,979,917	-	400.000	4.408	RNA5SP216	ENSG00000251920.1	ncRNA
chr6	125,979,929	125,979,936	-	400.000	4.550	RNA5SP216	ENSG00000251920.1	ncRNA
chr6	153,420,472	153,420,475	+	87.660	4.501	RNA5SP225	ENSG00000222806.1	ncRNA
chr6	153,420,475	153,420,500	+	400.000	4.583	RNA5SP225	ENSG00000222806.1	ncRNA
chr6	153,420,500	153,420,526	+	400.000	4.583	RNA5SP225	ENSG00000222806.1	ncRNA
chr7	44,796,680	44,796,718	+	4.168	3.029	PPIA	ENSG00000196262.15	5' UTR
chr7	98,881,697	98,881,755	+	5.214	3.016	hsa-mir-3609	MI0015999	miRNA
chr7	101,817,451	101,817,462	+	8.256	4.236	CUX1	ENSG00000257923.12	Distal intron
chr7	101,817,462	101,817,477	+	7.714	4.010	CUX1	ENSG00000257923.12	Distal intron
chr7	128,862,871	128,862,961	+	6.180	3.985	ATP6V1F	ENSG00000128524.5	CDS
chr7	135,977,254	135,977,348	-	5.179	3.204	MTPN	ENSG00000105887.11	5' UTR
chr7	156,725,016	156,725,041	-	4.851	4.443	LMBR1	ENSG00000105983.23	Proximal intron
chr7	158,632,006	158,632,033	-	4.443	4.787	NCAPG2	ENSG00000146918.20	Proximal intron
chr8	28,530,445	28,530,513	+	21.010	4.106	RNA5SP259	ENSG00000202411.1	ncRNA
chr8	30,082,990	30,083,072	-	3.775	4.299	SARAF	ENSG00000133872.14	5' UTR
chr8	38,347,553	38,347,638	-	4.567	3.277	NSD3	ENSG00000147548.17	CDS
chr8	59,455,884	59,455,928	+	6.516	4.644	RNA5SP267	ENSG00000201763.1	ncRNA
chr8	69,690,308	69,690,391	-	4.501	4.467	SLCO5A1	ENSG00000137571.11	Distal intron
chr8	73,972,074	73,972,170	-	3.911	3.434	ELOC	ENSG00000154582.18	5' UTR
chr8	138,803,377	138,803,394	-	22.776	4.225	COL22A1	ENSG00000169436.17	Proximal intron
chr8	138,803,394	138,803,450	-	22.282	3.903	COL22A1	ENSG00000169436.17	Proximal intron
chr8	144,082,616	144,082,679	+	3.959	4.255	GPAA1	ENSG00000197858.11	5' UTR
chr8	144,082,702	144,082,790	+	8.506	4.453	GPAA1	ENSG00000197858.11	CDS
chr8	144,792,364	144,792,390	-	5.408	3.002	RPL8	ENSG00000161016.18	5' UTR
chr9	76,571,726	76,571,846	+	31.021	4.131	GCNT1	ENSG00000187210.14	ncRNA
chr9	76,571,888	76,571,961	+	5.395	3.563	GCNT1	ENSG00000187210.14	ncRNA
chr9	100,427,156	100,427,356	+	5.116	4.034	MSANTD3	ENSG00000066697.15	5' UTR
chr9	110,256,552	110,256,622	-	6.489	3.309	nan	nan	Intergenic
chr9	122,880,221	122,880,306	-	4.851	3.548	SNORD90	ENSG00000212447.1	ncRNA
chr9	124,869,128	124,869,162	+	5.628	4.720	ARPC5L	ENSG00000136950.13	5' UTR
chr9	124,869,162	124,869,215	+	9.237	4.977	ARPC5L	ENSG00000136950.13	5' UTR
chr9	125,006,024	125,006,060	-	9.162	5.673	SCAI	ENSG00000173611.18	Distal intron
chr9	135,479,812	135,479,956	+	3.198	3.112	PPP1R26	ENSG00000196422.11	5' UTR
chr9	136,662,913	136,662,926	+	5.944	3.867	EGFL7	ENSG00000172889.16	5' UTR
chr9	136,662,926	136,662,982	+	11.322	3.750	EGFL7	ENSG00000172889.16	5' UTR
chrM	5,831	5,858	-	28.564	3.321	MT-TY	ENSG00000210144.1	ncRNA
chrX	40,063,639	40,063,738	-	5.483	3.459	BCOR	ENSG00000183337.18	CDS
chrX	71,545,487	71,545,536	+	3.572	3.490	OGT	ENSG00000147162.15	Distal intron
chrX	71,546,770	71,546,843	+	62.635	7.432	OGT	ENSG00000147162.15	Distal intron
chrX	71,547,030	71,547,071	+	72.928	7.402	OGT	ENSG00000147162.15	Distal intron
chrX	71,547,071	71,547,087	+	86.223	6.860	OGT	ENSG00000147162.15	Distal intron
chrX	71,547,087	71,547,096	+	133.738	7.317	OGT	ENSG00000147162.15	Distal intron
chrX	71,547,096	71,547,152	+	400.000	6.952	OGT	ENSG00000147162.15	Distal intron
chrX	71,547,647	71,547,729	+	73.594	6.248	OGT	ENSG00000147162.15	Proximal intron
chrX	71,547,729	71,547,770	+	38.975	7.168	OGT	ENSG00000147162.15	Proximal intron

The following tables contain identified motifs, where a motif is a short sequence of nucleotides that is significantly enriched in called peaks. Motifs were identified using HOMER's findMotifsGenome.pl tool. Motifs were called at multiple lengths, and results from all examined lengths are aggregated in the tables.

The following columns are included in the tables:

Motif: logo plot for the identified motif.
IUPAC: sequence of motif in IUPAC code.
Motif length: length of the called motif.
P-value: Significance of the called motif.
-log₁₀(p-value): log transformed significance, a larger number indicates a greater significance.
% Peaks: percent of examined peaks with the identified motif.
% Background: percent of non-peak background regions with the motif.

Please note, this table is interactive. You can search for specific sequences, and can sort the table by any of the columns. The search buttons at thr bottom of the tables allow for specific filtering by sequence or motif length.

ENCSR773KRC (HepG2) Motifs

IUPAC sequence	Motif length	P-value	-log₁₀(p-value)	% Peaks	% Background
CUGGABCNVB	10	1e-46	106.38	44.71	19.97
CUGGAUCU	8	1e-43	100.4	41.99	18.5
CYDUGGAS	8	1e-36	84.68	35.65	15.39
GGAWCUGGAGGM	12	1e-32	74.9	14.2	3.18
UUYSUGGA	8	1e-26	60.28	26.13	11.12
GAUCUGGAYA	10	1e-22	50.95	3.63	0.19
GGAGUCCCUGGA	12	1e-20	47.22	8.91	1.98
CCGGACCUGC	10	1e-17	40.65	21.0	9.65
UGCUGGACCUGC	12	1e-16	38.25	3.02	0.2
UGGACUUC	8	1e-16	37.64	7.85	1.93
UCUGUGGAGA	10	1e-15	36.53	8.16	2.13
UGGAUCUUGGAG	12	1e-15	35.33	3.63	0.38
AUGADGAAGA	10	1e-15	34.84	13.6	5.32
UGGACUYUGG	10	1e-13	32.2	11.63	4.34
GGAGYMGC	8	1e-13	31.82	9.06	2.88
CCGAYUGA	8	1e-13	31.8	11.63	4.37
ACCUGCGCGGGA	12	1e-13	30.92	0.91	0.0
UGCCGACUGACG	12	1e-13	30.92	0.91	0.0
AGGACUUCAGGC	12	1e-13	30.92	0.91	0.0
AUGCCUGUGGAC	12	1e-13	30.92	0.91	0.0
GACCGMGGGG	10	1e-13	30.62	8.01	2.39
GAAGAAGA	8	1e-12	29.58	13.44	5.73
SCMGMGSAGM	10	1e-12	29.4	17.82	8.78
CUUUGGAGGA	10	1e-12	28.72	2.87	0.3
CCUGAGGACAAC	12	1e-12	27.96	3.17	0.39

ENCSR381VNR (K562) Motifs

IUPAC sequence	Motif length	P-value	-log₁₀(p-value)	% Peaks	% Background
GUACUUGGAU	10	1e-28	65.64	3.86	0.0
UCAAAACUUGGG	12	1e-23	54.67	3.86	0.01
CUGAACGCGC	10	1e-19	43.86	2.7	0.0
AUCUCGUCUG	10	1e-18	42.23	3.09	0.01
GAUCUCGUCUGA	12	1e-18	42.23	3.09	0.01
GUUAGUAC	8	1e-18	42.23	3.09	0.01
CAMCCYGRAMGY	12	1e-16	39.01	2.7	0.01
UUGGAUGG	8	1e-15	36.83	3.86	0.05
UCGGAAGCCAUC	12	1e-13	30.01	1.93	0.0
CAUGAACG	8	1e-12	27.98	3.09	0.05