SAFB


This analysis report summarizes SAFB eCLIP data from ENCODE. The current tab provides an overview of the results, and the other tabs list identified peaks and motifs.

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Experiment Summary


Experiment ID File ID Sample Antibody source Antibody ID Antibody lot Release date Laboratory Number of peaks
ENCSR337XGIENCFF232WUEHepG2Zen Bioscience#200580201303042018-08-30Gene Yeo, UCSD282
ENCSR484LABENCFF953WTPK562Zen Bioscience#200580201303042018-08-30Gene Yeo, UCSD527

SAFB Peak Assignments


The following plots show the assignment of peaks into different genic features:

Introns contain other subdivisions, please see the subsequent plot for a breakdown of those features.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

SAFB Intron Assignments


The following plots show the assignment of peaks into different intronic features:

  •  5’ splice site: the peak is within the first 100 bp of an intron (5’ to 3’ direction
  •  3’ splice site: the peak is within the last 100 bp of an intron (5’ to 3’ direction)
  •  Proximal intron: the peak is within 100 bp to 500 bp of the nearest exon
  •  Distal intron: greater than 500 bp away from the nearest exon

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

SAFB Motifs


The following plot shows a summary of the top five motifs by significance in each experiment. Motifs were detected with varying length parameters, you may observe a similar motif with different number of bases included multiple times. A motif present in more peaks and with a higher significance will be in the upper right quadrant of the plot, while the lower left quadrant has motifs that are less significant and in fewer peaks.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.



The following tables contain called SAFB peaks. To identify peaks, clusters (regions of read enrichment) in the immunoprecipitated (IP) samples were found using the peak calling tool CLIPper. To account for background signal, a cluster was identified as a peak if the log2 fold enrichment over input was ≥ 3 and the p-value ≤ 0.001.

Peaks were annotated using transcript information from GENCODE. Each annotated peak is labeled with specific annotation feature types, first split by coding and non-coding transcripts, then by transcript regions, and then by intron/exon proximity regions. For overlapping transcript regions, the following hierarchy is used to label the region: coding sequence (CDS), 5’ or 3’ untranslated region (UTR), intron, non-coding exon, then non-coding intron. For example, if a peak is in the 5’ UTR of one transcript that overlaps an intron of another transcript, the peak region will be labeled as 5’ UTR. All gene annotations are from GENCODE release v41.

The following columns are included in the tables:

  •  Chromosome: chromosome where the peak is located.
  •  Peak start: start coordinate for the peak.
  •  Peak stop: stop coordinate for the peak.
  •  Strand: strand of DNA where the peak was called.
  •  -log10(p-value): significance of the cluster call by CLIPper. Values are log transformed so a larger number indicates a greater significance.
  •  log2(fold change): log transformed fold enrichment of the IP signal over a matched input.
  •  Gene name: name (symbol) of the gene that overlaps with the peak.
  •  Ensembl ID: unique identifer of the gene that overlaps with the peak.
  •  Feature: which part of the listed gene overlaps with the peak.

Please note, this table is interactive. You can search for specific genes or features, and can sort the table by any of the columns.

ENCSR337XGI (HepG2) Peaks


Chromosome Peak start Peak stop Strand -log10(p-value) log2(fold change) Gene name Ensembl ID Feature
chr63,301,8343,301,889-3.7923.224SLC22A23ENSG00000137266.15Distal intron
chr2037,506,20137,506,298-4.6644.241BLCAPENSG00000166619.15ncRNA
chr144,456,77044,456,831+3.1054.117RNF220ENSG00000187147.18Distal intron
chr7158,150,786158,150,914-5.5614.701PTPRN2ENSG00000155093.19Distal intron
chrX133,871,179133,871,216-4.2113.178GPC3ENSG00000147257.16Distal intron
chr2044,427,04944,427,122+6.4444.677HNF4AENSG00000101076.20Distal intron
chr1742,906,18042,906,240+3.3723.396G6PC1ENSG00000131482.10Distal intron
chr6166,944,823166,944,924-11.2674.234ENSG00000249141|RNASET2ENSG00000026297.17||ENSG00000249141.1Distal intron
chr1955,641,31855,641,426+3.3723.217ZNF581|CCDC106|ZNF580ENSG00000171425.10||ENSG00000213015.9||ENSG00000173581.8Proximal intron
chr1350,235,55550,235,714+3.2693.005DLEU1ENSG00000176124.15ncRNA
chr1397,362,92497,363,024+5.3033.383MBNL2ENSG00000139793.20Distal intron
chr7158,466,113158,466,195-5.1033.133PTPRN2ENSG00000155093.19Distal intron
chr12124,785,039124,785,131-5.6813.741SCARB1ENSG00000073060.17Distal intron
chr488,772,99088,773,080-3.9704.291FAM13AENSG00000138640.15Distal intron
chr2187,491,249187,491,339-4.1913.219TFPIENSG00000003436.16Distal intron
chr7158,421,177158,421,252-5.5043.863PTPRN2ENSG00000155093.19Distal intron
chr6158,626,188158,626,249+3.5713.234TMEM181ENSG00000146433.10Proximal intron
chr2137,166,00137,166,056+3.3203.844TTC3ENSG00000182670.14CDS
chr61,898,5381,898,611-3.3723.079GMDSENSG00000112699.11Distal intron
chr813,241,94213,242,018-5.3293.494DLC1ENSG00000164741.15Distal intron
chrX74,204,76874,204,811-4.2113.980FTXENSG00000230590.13ncRNA
chr1165,500,79265,500,806+32.9663.868MALAT1ENSG00000251562.10ncRNA
chr2048,931,64048,931,728+4.8943.026ARFGEF2ENSG00000124198.10Distal intron
chr7158,549,364158,549,433-4.2113.477PTPRN2ENSG00000155093.19Distal intron
chr1035,415,53835,415,621+3.1053.734CCNYENSG00000108100.18Distal intron
chr17316,100316,160-3.7744.571RPH3ALENSG00000181031.16Distal intron
chr262,833,53562,833,610+5.6813.541EHBP1ENSG00000115504.15Distal intron
chr10124,064,486124,064,549-3.0803.835CHST15ENSG00000182022.18Distal intron
chr3196,967,722196,967,795-3.0703.065PIGZENSG00000119227.8Distal intron
chr817,903,98117,904,019-13.7253.204FGL1ENSG00000104760.17Distal intron
chr1226,788,55926,788,649-3.6583.908ITPR2ENSG00000123104.12Distal intron
chr813,231,31813,231,378-3.3723.097DLC1ENSG00000164741.15Distal intron
chr861,638,48661,638,582-3.4333.750ASPHENSG00000198363.18Proximal intron
chr3197,516,986197,517,135-14.6575.911BDH1ENSG00000161267.12Distal intron
chr3197,517,135197,517,220-8.2765.370BDH1ENSG00000161267.12Distal intron
chr2037,509,72437,509,773-3.0163.844BLCAPENSG00000166619.15ncRNA
chr729,213,41029,213,479+3.3203.773CHN2|ENSG00000285162ENSG00000106069.24||ENSG00000285162.1Distal intron
chr4151,261,235151,261,363-5.2833.534SH3D19ENSG00000109686.19Distal intron
chr8122,819,632122,819,716+3.2483.152ZHX2ENSG00000178764.8Distal intron
chr1165,581,95965,582,052+4.8674.286EHBP1L1ENSG00000173442.13CDS
chr17315,626315,694-6.4215.395RPH3ALENSG00000181031.16Distal intron
chr1421,259,18721,259,276-8.9423.075HNRNPCENSG00000092199.19Distal intron
chrX20,253,06420,253,122-4.0053.175RPS6KA3ENSG00000177189.14Distal intron
chr6157,310,541157,310,637-5.5173.302TMEM242ENSG00000215712.11Distal intron
chr10131,920,299131,920,403+5.7173.890PPP2R2DENSG00000175470.20Distal intron
chr2035,652,76835,652,867-11.3854.093RBM12ENSG00000244462.8CDS
chr2146,144,94346,144,964-3.6713.064FTCDENSG00000160282.15Proximal intron
chr1147,204,231147,204,295-7.2083.347CCT8P1ENSG00000226015.2ncRNA
chr105,696,3905,696,421+3.3433.024TASOR2ENSG00000108021.22Distal intron
chrX20,250,66420,250,729-3.7744.097RPS6KA3ENSG00000177189.14Distal intron
chr2237,579,271237,579,323-5.5743.034RAB17ENSG00000124839.13Distal intron
chr168,843,1668,843,384+3.8783.180PMM2ENSG00000140650.13Distal intron
chr2037,503,47437,503,596-8.2764.920BLCAPENSG00000166619.15ncRNA
chr8100,293,145100,293,248-4.8943.079RNF19AENSG00000034677.13Distal intron
chr1059,243,54359,243,637+3.1953.723PHYHIPLENSG00000165443.12Distal intron
chr7158,517,385158,517,511-3.9864.306PTPRN2ENSG00000155093.19Distal intron
chr17315,972315,995-5.7694.628RPH3ALENSG00000181031.16Distal intron
chr17315,950315,972-4.2113.562RPH3ALENSG00000181031.16Distal intron
chr2166,300,587166,300,651-3.0163.573SCN9AENSG00000169432.19Distal intron
chr208,556,6738,556,760+3.7923.572PLCB1ENSG00000182621.18Distal intron
chr3196,966,715196,966,787-4.9564.201PIGZENSG00000119227.8Distal intron
chr262,854,95362,855,003+3.2293.850EHBP1ENSG00000115504.15Distal intron
chr61,906,9361,907,013-3.0163.747GMDSENSG00000112699.11Distal intron
chr488,777,57488,777,667-4.9643.009FAM13AENSG00000138640.15Distal intron
chr1398,230,52898,230,588+3.3204.089FARP1ENSG00000152767.17Distal intron
chr1624,790,39024,790,478+4.4933.452TNRC6AENSG00000090905.19CDS
chr2190,211,597190,211,675-3.9864.052HIBCHENSG00000198130.16Distal intron
chr1375,310,73475,310,789-3.1053.781TBC1D4ENSG00000136111.14Distal intron
chr208,216,9638,217,031+3.4333.972PLCB1ENSG00000182621.18Distal intron
chr112,612,19612,612,237-5.1143.540DHRS3ENSG00000162496.9Distal intron
chr2187,515,859187,515,926+4.8173.173CALCRL-AS1ENSG00000224063.6ncRNA
chr1398,240,79598,240,857+4.8674.366FARP1ENSG00000152767.17Distal intron
chr8120,667,285120,667,377-3.1673.013SNTB1ENSG00000172164.15Distal intron
chr7157,850,728157,850,812-3.9864.142PTPRN2ENSG00000155093.19Distal intron
chr1155,313,537155,313,586+3.1053.866FDPSENSG00000160752.15Distal intron
chr208,202,6408,202,685+3.1053.658PLCB1ENSG00000182621.18Distal intron
chr349,968,44849,968,513+4.4424.382RBM6ENSG00000004534.15CDS
chr1585,108,17785,108,325+3.8713.909PDE8AENSG00000073417.15Distal intron
chr94,726,1694,726,243-3.3723.019AK3ENSG00000147853.17Distal intron
chr1397,359,33497,359,456+4.4223.545MBNL2ENSG00000139793.20Distal intron
chr12,393,4242,393,527+3.1673.206RER1ENSG00000157916.20Proximal intron
chr10131,918,053131,918,172+4.4424.089PPP2R2DENSG00000175470.20Distal intron
chr1165,500,64865,500,655+400.0003.785MALAT1ENSG00000251562.10ncRNA
chr1165,500,65565,500,662+400.0003.762MALAT1ENSG00000251562.10ncRNA
chr1165,500,66265,500,667+400.0003.735MALAT1ENSG00000251562.10ncRNA
chr1165,500,66765,500,694+400.0003.691MALAT1ENSG00000251562.10ncRNA
chr1165,500,69465,500,698+44.0143.662MALAT1ENSG00000251562.10ncRNA
chr1165,500,63765,500,648+400.0003.613MALAT1ENSG00000251562.10ncRNA
chr1165,500,63065,500,637+74.2033.571MALAT1ENSG00000251562.10ncRNA
chr1165,500,57465,500,586+38.1083.416MALAT1ENSG00000251562.10ncRNA
chr1165,500,70565,500,710+42.9973.406MALAT1ENSG00000251562.10ncRNA
chr1165,500,61265,500,620+66.1913.394MALAT1ENSG00000251562.10ncRNA
chr1165,500,69865,500,705+46.6723.383MALAT1ENSG00000251562.10ncRNA
chr1165,500,62065,500,630+70.1793.380MALAT1ENSG00000251562.10ncRNA
chr1165,500,77865,500,789+24.1423.335MALAT1ENSG00000251562.10ncRNA
chr1165,500,55765,500,565+31.8153.311MALAT1ENSG00000251562.10ncRNA
chr1165,500,71065,500,737+69.8643.286MALAT1ENSG00000251562.10ncRNA
chr1165,500,58665,500,605+58.0873.258MALAT1ENSG00000251562.10ncRNA
chr1165,500,56565,500,574+33.9043.215MALAT1ENSG00000251562.10ncRNA
chr1165,500,77065,500,778+27.7023.182MALAT1ENSG00000251562.10ncRNA
chr1165,500,60565,500,612+50.1993.177MALAT1ENSG00000251562.10ncRNA
chr1165,500,73765,500,761+53.7973.062MALAT1ENSG00000251562.10ncRNA
chr10124,034,444124,034,505-5.3404.393CHST15ENSG00000182022.18Distal intron
chr7157,837,634157,837,727-3.1673.265PTPRN2ENSG00000155093.19Distal intron
chrX133,928,048133,928,104-6.0114.584GPC3ENSG00000147257.16Distal intron
chr1543,140,11543,140,221+3.6783.073TMEM62ENSG00000137842.7Distal intron
chr19878,918879,017-5.0033.158MED16ENSG00000175221.16Distal intron
chr19879,283879,374-13.2004.109MED16ENSG00000175221.16Distal intron
chr19879,202879,283-5.5044.030MED16ENSG00000175221.16Distal intron
chr135,437,03935,437,154-3.3723.040KIAA0319LENSG00000142687.19Distal intron
chr2240,625,688240,625,754+3.7923.113GPR35ENSG00000178623.13Proximal intron
chr7157,871,516157,871,589-3.0804.059PTPRN2ENSG00000155093.19Distal intron
chr144,455,94044,456,081+4.1583.242RNF220ENSG00000187147.18Distal intron
chr1332,536,21532,536,251-3.1673.221N4BP2L2ENSG00000244754.9CDS
chr776,578,80576,578,911+3.7923.274LINC03009ENSG00000205485.13ncRNA
chr208,173,0448,173,134+5.0523.623PLCB1ENSG00000182621.18Distal intron
chr1687,923,62487,923,687-3.7543.175CA5AENSG00000174990.8Distal intron
chr2236,229,18936,229,294-4.1913.357APOL2ENSG00000128335.14Distal intron
chr7158,450,119158,450,183-3.5713.201PTPRN2ENSG00000155093.19Distal intron
chr10131,916,817131,916,910+3.6583.805PPP2R2DENSG00000175470.20Distal intron
chr2146,140,22946,140,287-7.6403.201FTCDENSG00000160282.15Distal intron
chr1234,408,574234,408,716-3.7923.274TARBP1ENSG00000059588.10Distal intron
chr6129,538,183129,538,318-3.3203.747ENSG00000226149ENSG00000226149.6ncRNA
chr63,319,0373,319,086-3.8603.180SLC22A23ENSG00000137266.15Distal intron
chr813,241,73113,241,798-3.7923.113DLC1ENSG00000164741.15Distal intron
chr5109,798,307109,798,426+4.2933.280MAN2A1ENSG00000112893.10Distal intron
chr7158,296,972158,297,108-3.3723.319PTPRN2ENSG00000155093.19Distal intron
chr2250,709,29250,709,410+3.8783.200SHANK3ENSG00000251322.11Distal intron
chr896,511,25696,511,313+3.1053.684SDC2ENSG00000169439.12Distal intron
chr1624,790,75724,790,948+6.6783.014TNRC6AENSG00000090905.19CDS
chr6158,565,849158,565,914+4.9143.507TMEM181ENSG00000146433.10Distal intron
chr2146,143,16946,143,238-6.3863.188FTCDENSG00000160282.15Distal intron
chr208,545,2798,545,382+4.6644.152PLCB1ENSG00000182621.18Distal intron
chr168,832,2608,832,331+3.7743.830PMM2ENSG00000140650.13Distal intron
chr1398,417,52498,417,607+3.1053.825FARP1ENSG00000152767.17Distal intron
chr1397,361,49497,361,598+6.3733.766MBNL2ENSG00000139793.20Distal intron
chr1226,385,19126,385,264-3.4683.005ITPR2ENSG00000123104.12Distal intron
chr1350,616,67750,616,748+3.0163.636DLEU1ENSG00000176124.15ncRNA
chr1689,480,82589,480,920-3.0803.742ANKRD11ENSG00000167522.17Distal intron
chr2237,579,211237,579,258-5.9403.073RAB17ENSG00000124839.13Distal intron
chr168,832,8288,832,910+4.0784.005PMM2ENSG00000140650.13Distal intron
chr3197,516,734197,516,802-3.9864.071BDH1ENSG00000161267.12Distal intron
chr1200,409,399200,409,501-3.1053.603ZNF281ENSG00000162702.8CDS
chr23,472,2693,472,359+3.7743.855TRAPPC12ENSG00000171853.16Distal intron
chr17317,121317,206-4.8764.297RPH3ALENSG00000181031.16Distal intron
chr7157,841,145157,841,213-3.3203.797PTPRN2ENSG00000155093.19Distal intron
chr1147,195,681147,195,769-3.0703.141FMO5ENSG00000131781.13Distal intron
chr595,902,97695,903,087-4.6644.258ELL2ENSG00000118985.16Distal intron
chr3186,614,660186,614,707+15.4693.219AHSGENSG00000145192.13Distal intron
chr1226,652,77326,652,833-3.2293.850ITPR2ENSG00000123104.12Distal intron
chr112,614,87512,614,988-7.1173.237DHRS3ENSG00000162496.9Distal intron
chr2048,933,01848,933,133+4.4933.260ARFGEF2ENSG00000124198.10Distal intron
chr723,414,72323,414,839-4.9643.000IGF2BP3ENSG00000136231.14Distal intron
chr1454,637,87354,637,963+3.5713.183SAMD4AENSG00000020577.14Distal intron
chr338,415,40038,415,488+3.4333.750XYLBENSG00000093217.11Distal intron
chr7158,487,679158,487,733-3.5514.135PTPRN2ENSG00000155093.19Distal intron
chr17314,348314,429-5.2833.641RPH3ALENSG00000181031.16Distal intron
chr2237,582,104237,582,175-5.5133.497RAB17ENSG00000124839.13Distal intron
chr242,199,24242,199,309+4.8764.387EML4ENSG00000143924.19Distal intron
chr1226,651,89926,651,998-5.5043.763ITPR2ENSG00000123104.12Distal intron
chr12124,781,251124,781,329-3.3433.141SCARB1ENSG00000073060.17Distal intron
chr145,607,88245,607,959+8.0493.303NASPENSG00000132780.17CDS
chr3197,521,984197,522,024-3.0803.742BDH1ENSG00000161267.12Distal intron
chr1434,949,79734,949,877-3.1053.684SRP54-AS1ENSG00000258704.8ncRNA
chr1775,893,72275,893,815-3.7923.258TRIM65ENSG00000141569.12Distal intron
chr177,632,72177,632,862-4.2933.386ZZZ3ENSG00000036549.13CDS
chr1203,798,323203,798,432+4.9143.460ZBED6ENSG00000257315.4CDS
chr1689,518,86489,518,911+3.7923.207SPG7ENSG00000197912.16Distal intron
chr2032,363,89632,363,973+3.3203.986ASXL1ENSG00000171456.21Distal intron
chr129,170,50629,170,575-3.1053.658SRSF4ENSG00000116350.18Distal intron
chr4139,670,092139,670,151+4.2113.216MGST2ENSG00000085871.9Distal intron
chr193,597,94993,597,995+3.8713.858BCAR3-AS1ENSG00000224093.7ncRNA
chr3149,180,262149,180,309-3.1673.089CPENSG00000047457.14Distal intron
chr1165,500,83665,500,839+24.3283.089MALAT1ENSG00000251562.10ncRNA
chr580,652,00980,652,055-4.2114.193DHFRENSG00000228716.7Distal intron
chr1165,500,35565,500,375+400.0003.625MALAT1ENSG00000251562.10ncRNA
chr1165,500,32865,500,355+54.6783.429MALAT1ENSG00000251562.10ncRNA
chr2230,967,20430,967,264-3.8573.005MORC2ENSG00000133422.145' UTR
chr1768,426,34368,426,391+3.2293.802ENSG00000267009ENSG00000267009.6ncRNA
chr813,214,44513,214,502-4.8764.247DLC1ENSG00000164741.15Distal intron
chr813,214,50213,214,552-4.8563.478DLC1ENSG00000164741.15Distal intron
chr1165,500,10565,500,117+45.1913.242MALAT1ENSG00000251562.10ncRNA
chr1165,500,11765,500,136+48.3383.198MALAT1ENSG00000251562.10ncRNA
chr1165,500,09465,500,105+34.3713.077MALAT1ENSG00000251562.10ncRNA
chr1165,500,08465,500,094+34.1373.053MALAT1ENSG00000251562.10ncRNA
chr1165,500,13665,500,182+43.3183.030MALAT1ENSG00000251562.10ncRNA
chr2237,598,518237,598,568-3.6583.832RAB17ENSG00000124839.13ncRNA
chr7158,420,163158,420,281-5.5523.202PTPRN2ENSG00000155093.19Distal intron
chr17314,574314,682-5.1084.791RPH3ALENSG00000181031.16Distal intron
chr2146,140,40846,140,523-16.0763.079FTCDENSG00000160282.15Distal intron
chr7157,841,085157,841,132-3.9863.929PTPRN2ENSG00000155093.19Distal intron
chr2161,188,819161,188,895+3.0163.605TANKENSG00000136560.14Distal intron
chr7158,151,433158,151,495-3.3204.448PTPRN2ENSG00000155093.19Distal intron
chr7158,151,574158,151,673-5.5614.866PTPRN2ENSG00000155093.19Distal intron
chrX109,688,976109,689,048-6.6853.031ACSL4ENSG00000068366.21Distal intron
chr8122,877,834122,877,905+3.3203.797ZHX2ENSG00000178764.8Distal intron
chr2166,267,854166,267,958-3.3433.358SCN9AENSG00000169432.19Distal intron
chrX281,161281,264+5.0613.880PLCXD1ENSG00000182378.155' UTR
chr7157,241,041157,241,149+3.7743.986UBE3CENSG00000009335.18Distal intron
chr7158,559,641158,559,698-3.1054.010PTPRN2ENSG00000155093.19Distal intron
chr348,427,68448,427,728-3.4683.028PLXNB1ENSG00000164050.13Distal intron
chr2241,326,915241,326,996+4.2933.298SEPTIN2ENSG00000168385.18Distal intron
chr1524,990,55924,990,610+7.5844.918SNHG14ENSG00000224078.15ncRNA
chr1524,990,61024,990,659+7.4384.058SNHG14ENSG00000224078.15ncRNA
chr1075,481,48675,481,620+3.8783.256LRMDAENSG00000148655.15Distal intron
chr2236,052,991236,053,113+3.5513.978AGAP1ENSG00000157985.20Distal intron
chr7157,775,969157,776,082-6.1524.402PTPRN2ENSG00000155093.19Distal intron
chr1755,292,19155,292,240+6.3733.835HLFENSG00000108924.14Distal intron
chr1687,909,27387,909,375-5.1084.238CA5AENSG00000174990.8Distal intron
chr2243,936,36343,936,443+3.4683.051PNPLA3ENSG00000100344.11Distal intron
chr2200,432,250200,432,336+3.5513.873SPATS2LENSG00000196141.14Distal intron
chr161,116,04161,116,105+3.9864.158NFIAENSG00000162599.18Distal intron
chr88,347,2808,347,362-3.0803.790PRAG1ENSG00000275342.5Distal intron
chr2236,237,84336,237,955-3.0723.173APOL2ENSG00000128335.14Distal intron
chr193,598,24093,598,319+3.3204.260BCAR3-AS1ENSG00000224093.7ncRNA
chr9136,831,462136,831,559+3.1953.694hsa-mir-4292MI0015897miRNA
chr6157,313,450157,313,502-3.2693.234TMEM242ENSG00000215712.11Distal intron
chr7158,257,619158,257,749-3.3723.305PTPRN2ENSG00000155093.19Distal intron
chr12120,965,840120,965,936-4.4553.068HNF1A-AS1ENSG00000241388.6ncRNA
chr208,513,2228,513,315+4.2113.423PLCB1ENSG00000182621.18Distal intron
chr5146,489,081146,489,189+3.7743.945TCERG1ENSG00000113649.13Distal intron
chrX20,250,81520,250,872-3.5513.850RPS6KA3ENSG00000177189.14Distal intron
chr89,772,2159,772,320+4.6644.406TNKSENSG00000173273.163' splice site
chr89,772,1159,772,215+3.9864.158TNKSENSG00000173273.16Proximal intron
chr2248,724,93748,725,081+3.5513.777TAFA5ENSG00000219438.9Distal intron
chr3197,516,605197,516,671-5.1084.595BDH1ENSG00000161267.12Distal intron
chr6158,568,463158,568,519+4.0723.156TMEM181ENSG00000146433.10Distal intron
chrX278,283278,390+4.2113.688PLCXD1ENSG00000182378.15Distal intron
chr1397,362,55697,362,644+3.6713.339MBNL2ENSG00000139793.20Distal intron
chr2101,853,811101,853,882+4.9143.354MAP4K4ENSG00000071054.17Distal intron
chr1350,579,52850,579,607+3.0163.605DLEU1ENSG00000176124.15ncRNA
chr7158,420,085158,420,163-4.1913.738PTPRN2ENSG00000155093.19Distal intron
chr1689,367,02689,367,105-4.4793.486ANKRD11|ENSG00000288715ENSG00000167522.17||ENSG00000288715.1Distal intron
chr7157,775,632157,775,698-3.0803.857PTPRN2ENSG00000155093.19Distal intron
chr208,377,9888,378,087+4.2803.101PLCB1ENSG00000182621.18Distal intron
chr220,291,24120,291,320-3.7923.072PUM2ENSG00000055917.16Proximal intron
chr1086,500,04586,500,208-5.7333.692WAPLENSG00000062650.20CDS
chr7158,150,994158,151,069-3.7744.466PTPRN2ENSG00000155093.19Distal intron
chr2228,556,69728,556,869-6.1363.151TTC28ENSG00000100154.15Distal intron
chr7158,485,088158,485,138-3.1053.942PTPRN2ENSG00000155093.19Distal intron
chr2240,625,039240,625,130+3.6783.158GPR35ENSG00000178623.13Distal intron
chr236,535,98536,536,102+3.4334.013CRIM1ENSG00000150938.10Distal intron
chr1397,363,51297,363,583+4.6644.321MBNL2ENSG00000139793.20Distal intron
chr254,529,10354,529,200+3.6583.884SPTBN1ENSG00000115306.16Distal intron
chr1923,324,65723,324,739-3.3203.773ZNF91ENSG00000167232.14ncRNA
chr1398,241,21398,241,291+4.7733.027FARP1ENSG00000152767.17Distal intron
chr17315,303315,374-7.0274.223RPH3ALENSG00000181031.16Distal intron
chr1819,846819,993-3.1953.923ENSG00000230021ENSG00000230021.10ncRNA
chr10124,034,505124,034,653-4.2113.539CHST15ENSG00000182022.18Distal intron
chr8122,885,619122,885,722+3.4683.073ZHX2ENSG00000178764.8Distal intron
chr208,432,0748,432,126+3.5513.802PLCB1ENSG00000182621.18Distal intron
chr183,597,4343,597,506+5.1704.261DLGAP1-AS1ENSG00000177337.10ncRNA
chr2047,260,40547,260,477-4.8674.366ZMYND8ENSG00000101040.20Distal intron
chr1397,361,43697,361,494+3.5514.086MBNL2ENSG00000139793.20Distal intron
chr7157,775,194157,775,261-3.5513.938PTPRN2ENSG00000155093.19Distal intron
chr3197,535,999197,536,048-5.9213.617BDH1ENSG00000161267.12Distal intron
chr262,813,46662,813,554+3.6583.884EHBP1ENSG00000115504.15Distal intron
chr275,552,17675,552,190-3.6583.805EVA1AENSG00000115363.14Distal intron
chr275,552,12375,552,176-4.7033.458EVA1AENSG00000115363.14Distal intron
chr1820,614820,775-3.3204.332ENSG00000230021ENSG00000230021.10ncRNA
chr2240,619,958240,620,047+3.1053.758GPR35ENSG00000178623.13Distal intron
chr417,810,31117,810,406-3.4333.779DCAF16ENSG00000163257.115' splice site
chr2025,510,16025,510,247-3.5513.777NINLENSG00000101004.15Proximal intron
chr6157,311,205157,311,267-3.8783.219TMEM242ENSG00000215712.11Distal intron
chr12120,966,075120,966,108-3.0803.717HNF1A-AS1ENSG00000241388.6ncRNA
chr1782,230,28582,230,377+3.2693.027SLC16A3ENSG00000141526.18Distal intron
chr1652,488,86752,488,925-3.3203.821TOX3ENSG00000103460.17Distal intron
chr211,303,93411,303,986-3.1053.603ROCK2ENSG00000134318.16Distal intron
chr2187,490,938187,490,998-4.4223.345TFPIENSG00000003436.16Distal intron
chrX74,205,63674,205,751-5.7723.006FTXENSG00000230590.13ncRNA
chr144,512,49544,512,579+3.1054.131RNF220ENSG00000187147.18Distal intron
chr527,493,22627,493,270+3.8783.200PURPLENSG00000250337.9ncRNA
chr101,048,6661,048,814-4.8563.478IDI1ENSG00000067064.135' UTR
chr2237,578,752237,578,811-3.9843.062RAB17ENSG00000124839.13Distal intron
chr1755,291,31155,291,399+7.8263.162HLFENSG00000108924.14Distal intron
chr6158,566,234158,566,304+6.1323.321TMEM181ENSG00000146433.10Distal intron
chr144,523,12344,523,220+3.3204.260RNF220ENSG00000187147.18Distal intron
chr17314,734314,869-11.2405.849RPH3ALENSG00000181031.16Distal intron
chr2166,299,703166,299,772-4.2114.045SCN9AENSG00000169432.19Distal intron
chr1196,249,91196,250,002-3.9704.184MAML2ENSG00000184384.14Distal intron
chr271,395,56171,395,619+3.8603.116ZNF638ENSG00000075292.193' UTR
chr17315,470315,570-8.5644.742RPH3ALENSG00000181031.16Distal intron


ENCSR484LAB (K562) Peaks


Chromosome Peak start Peak stop Strand -log10(p-value) log2(fold change) Gene name Ensembl ID Feature
chr1165,500,01765,500,033+400.0003.163MALAT1ENSG00000251562.10ncRNA
chr1782,576,49982,576,627+4.6293.584FOXK2ENSG00000141568.21Distal intron
chr2219,401,65419,401,738-6.7063.688HIRAENSG00000100084.14Distal intron
chr1180,757,522180,757,579+3.1453.621XPR1ENSG00000143324.14Distal intron
chr3129,389,676129,389,821-4.8293.497RPL32P3ENSG00000251474.7ncRNA
chr310,308,09510,308,197-4.8303.548SEC13ENSG00000157020.18Distal intron
chr115,505,3055,505,359-3.2093.171HBG2ENSG00000196565.155' UTR
chr1720,884,51420,884,572+7.6754.936CCDC144NL-AS1ENSG00000233098.10ncRNA
chr8102,302,947102,303,002-5.9484.369UBR5ENSG00000104517.13Distal intron
chr1877,976,05977,976,085-3.1453.856LINC01029ENSG00000265843.3ncRNA
chr5136,478,412136,478,460+3.1793.744ENSG00000249803ENSG00000249803.6ncRNA
chr2143,900,66943,900,802+4.4524.061AGPAT3ENSG00000160216.21Distal intron
chr7128,815,965128,816,056+3.1453.700CCDC136ENSG00000128596.175' splice site
chr1165,500,60565,500,611+400.0003.238MALAT1ENSG00000251562.10ncRNA
chr1165,500,60165,500,605+400.0003.225MALAT1ENSG00000251562.10ncRNA
chr1165,500,58865,500,601+400.0003.160MALAT1ENSG00000251562.10ncRNA
chr56,723,8586,723,920+3.6253.042TENT4AENSG00000112941.14Distal intron
chr1877,978,00277,978,021-3.1453.876LINC01029ENSG00000265843.3ncRNA
chr1877,985,74577,985,772-4.0223.228ENSG00000264334|LINC01029ENSG00000265843.3||ENSG00000264334.1ncRNA
chr14101,801,237101,801,310+5.4904.454PPP2R5CENSG00000078304.20Distal intron
chr181,363,8871,363,971-4.4344.523LINC00470ENSG00000132204.14ncRNA
chr181,363,9711,364,064-9.8524.196LINC00470ENSG00000132204.14ncRNA
chr723,414,75423,414,843-5.0824.249IGF2BP3ENSG00000136231.14Distal intron
chr2249,491,60849,491,683-3.3803.726MIR3667HGENSG00000188511.14ncRNA
chr455,598,38355,598,427-4.4263.347NMUENSG00000109255.11Distal intron
chr115,461,4685,461,550-5.3143.019HBE1|HBG2ENSG00000196565.15||ENSG00000213931.7Distal intron
chr9133,273,169133,273,349-8.8903.480ABOENSG00000175164.16Distal intron
chr5132,303,709132,303,797+3.6173.288SLC22A4ENSG00000197208.6Distal intron
chr7157,239,733157,239,823+5.5124.436UBE3CENSG00000009335.18Distal intron
chr1540,624,16540,624,243+4.0223.362KNL1ENSG00000137812.21CDS
chr181,364,6811,364,739-3.2083.107LINC00470ENSG00000132204.14ncRNA
chr1068,573,42968,573,485+3.1793.990TET1ENSG00000138336.9CDS
chr1620,687,36820,687,452+4.2283.395ACSM3ENSG00000005187.12Distal intron
chr126,509,0976,509,134+4.0283.260NCAPD2ENSG00000010292.13Distal intron
chr3195,693,195195,693,264+4.4334.002MUC20-OT1ENSG00000242086.8ncRNA
chr1727,083,31627,083,407-6.8213.128TUFMP1ENSG00000265646.2ncRNA
chr1742,265,70642,265,791-4.2283.368STAT5BENSG00000173757.11Distal intron
chr2216,610,79216,610,852+6.0793.646ENSG00000283633|TPTEP1ENSG00000283633.1||ENSG00000100181.22ncRNA
chr1877,976,28077,976,331-5.8543.552LINC01029ENSG00000265843.3ncRNA
chr1750,739,97050,740,081+6.2563.191LUC7L3ENSG00000108848.16Proximal intron
chr181,289,2011,289,280-3.8163.329LINC00470ENSG00000132204.14ncRNA
chr993,670,81993,670,918+3.1853.766PHF2ENSG00000197724.11Distal intron
chr9130,607,699130,607,788+3.3803.976FUBP3ENSG00000107164.17Distal intron
chr1812,994,62712,994,737+3.3803.726CEP192ENSG00000101639.19Distal intron
chr191,519,11391,519,202+3.7883.893CDC7ENSG00000097046.13Distal intron
chr7127,351,154127,351,246-3.3803.774ZNF800ENSG00000048405.11ncRNA
chr9123,267,724123,267,795-4.2444.058STRBPENSG00000165209.19Distal intron
chr1921,448,41121,448,503-7.8833.550ENSG00000268119ENSG00000268119.8ncRNA
chr1921,448,32921,448,393-4.4303.332ENSG00000268119ENSG00000268119.8ncRNA
chr7119,741,877119,741,963-3.4223.021LINC02476ENSG00000225546.6ncRNA
chr7158,777,567158,777,631-3.6173.080ESYT2ENSG00000117868.18Distal intron
chrX136,874,744136,874,794-4.0223.998RBMXENSG00000147274.143' UTR
chr255,025,92955,026,014-8.0873.802RTN4ENSG00000115310.19CDS
chr1688,963,44988,963,501-4.4394.061CBFA2T3ENSG00000129993.15Distal intron
chr182,735,7912,735,840+3.3873.724SMCHD1ENSG00000101596.17Distal intron
chr992,239,67692,239,816-3.6014.334IARS1ENSG00000196305.19Distal intron
chr5146,487,511146,487,622+8.1124.788TCERG1ENSG00000113649.13Distal intron
chr129,177,70229,177,766-9.2274.305SRSF4ENSG00000116350.18Distal intron
chr129,177,59729,177,702-17.2973.580SRSF4ENSG00000116350.18Distal intron
chr129,177,76629,177,818-6.6493.398SRSF4ENSG00000116350.18Distal intron
chr1720,884,16520,884,235+7.9314.115CCDC144NL-AS1ENSG00000233098.10ncRNA
chr7130,103,111130,103,205+3.3803.921KLHDC10ENSG00000128607.14Distal intron
chr456,929,95156,930,084+3.1793.621RESTENSG00000084093.19CDS
chr9131,207,267131,207,376+9.9613.312NUP214ENSG00000126883.19Distal intron
chr7157,241,021157,241,142+7.1123.823UBE3CENSG00000009335.18Distal intron
chr1624,791,26724,791,326+4.4394.042TNRC6AENSG00000090905.19CDS
chr160,631,94860,632,071-3.1453.648LINC01748ENSG00000226476.7ncRNA
chr7119,706,631119,706,683-6.8753.140LINC02476ENSG00000225546.6ncRNA
chr115,400,9255,400,963-3.5973.154HBE1|HBG2ENSG00000196565.15||ENSG00000213931.7Distal intron
chr1165,500,27765,500,286+400.0003.032MALAT1ENSG00000251562.10ncRNA
chr9133,262,289133,262,356-4.6043.319ABOENSG00000175164.16Proximal intron
chr1213,002,907213,002,922-7.6243.393ANGEL2ENSG00000174606.14Distal intron
chr7153,400,844153,400,902-3.8083.869LINC01287ENSG00000234722.5ncRNA
chr1782,462,29082,462,339+7.0743.063NARFENSG00000141562.19Distal intron
chr663,713,03563,713,198+7.4513.053PHF3ENSG00000118482.12CDS
chr9123,267,915123,267,976-3.8174.043STRBPENSG00000165209.19Proximal intron
chr1165,500,67965,500,683+400.0003.739MALAT1ENSG00000251562.10ncRNA
chr1165,500,66765,500,679+400.0003.735MALAT1ENSG00000251562.10ncRNA
chr1729,286,92229,286,977-4.4334.023NUFIP2ENSG00000108256.9CDS
chr2249,614,13049,614,217-4.2113.282ENSG00000235111ENSG00000235111.1ncRNA
chr1750,739,34450,739,386+4.2444.021LUC7L3ENSG00000108848.16Distal intron
chr9131,207,376131,207,446+7.8423.285NUP214ENSG00000126883.19Distal intron
chr113,391,9063,391,995+6.0533.317TSSC2ENSG00000223756.8ncRNA
chr2247,798,33547,798,459+3.3803.797EPIC1ENSG00000224271.8ncRNA
chr3180,609,978180,610,072+3.6253.022TTC14ENSG00000163728.11CDS
chr1203,797,847203,797,961+7.4843.073ZBED6ENSG00000257315.4CDS
chr2169,637,244169,637,375+7.9313.937PPIGENSG00000138398.17CDS
chr841,752,62841,752,732-3.8173.240ANK1ENSG00000029534.21Distal intron
chr1934,391,19334,391,291+35.0043.105GPIENSG00000105220.17Distal intron
chr1934,382,75934,382,798+5.1653.023GPIENSG00000105220.17Distal intron
chr1540,622,39340,622,477+3.1453.932KNL1ENSG00000137812.21CDS
chr1165,500,65565,500,658+400.0003.663MALAT1ENSG00000251562.10ncRNA
chr510,731,42510,731,556-3.1453.621DAPENSG00000112977.16Distal intron
chr1720,898,24520,898,363+8.3234.996CCDC144NL-AS1ENSG00000233098.10ncRNA
chr8129,548,583129,548,639-4.4394.061CCDC26ENSG00000229140.12ncRNA
chr1620,706,34720,706,462+4.0224.036ACSM3ENSG00000005187.12Distal intron
chr115,422,2345,422,306-4.2443.960HBG2|HBE1ENSG00000213931.7||ENSG00000196565.15Distal intron
chr890,005,48690,005,565+3.8083.800DECR1ENSG00000104325.75' UTR
chr992,239,01292,239,120-3.0233.401IARS1ENSG00000196305.19Distal intron
chr1293,496,81493,496,913+3.6013.776MRPL42ENSG00000198015.14Distal intron
chr2151,463,185151,463,303+6.2563.459RIF1ENSG00000080345.18CDS
chr12,392,8462,392,920+4.4394.133RER1ENSG00000157916.20Distal intron
chr7119,851,536119,851,621-5.4573.023LINC02476ENSG00000225546.6ncRNA
chr36,582,4666,582,523+3.2133.032ENSG00000189229ENSG00000189229.12ncRNA
chr140,236,87140,236,970+5.4493.648RLFENSG00000117000.9CDS
chr113,391,5583,391,643+8.0593.478TSSC2ENSG00000223756.8ncRNA
chr105,696,5405,696,617+5.4954.633TASOR2ENSG00000108021.22Distal intron
chr1572,523,52272,523,607+3.8173.891ARIH1ENSG00000166233.15Distal intron
chr578,086,52578,086,644-3.3804.043AP3B1ENSG00000132842.15Distal intron
chr1877,977,42177,977,536-8.7293.553LINC01029ENSG00000265843.3ncRNA
chr129,178,68429,178,764-8.4883.337SRSF4ENSG00000116350.18Distal intron
chr6161,048,788161,048,912+6.8873.810MAP3K4ENSG00000085511.20CDS
chr8129,549,041129,549,094-3.2083.018CCDC26ENSG00000229140.12ncRNA
chr9131,204,318131,204,411+9.5583.221NUP214ENSG00000126883.19Distal intron
chr1197,103,584197,103,665-3.4193.293ASPMENSG00000066279.19CDS
chr9136,817,578136,817,669+4.2373.938RABL6ENSG00000196642.19Distal intron
chr1165,583,06465,583,125+4.6664.256EHBP1L1ENSG00000173442.13CDS
chr1165,583,12565,583,233+7.1753.337EHBP1L1ENSG00000173442.13CDS
chr1688,964,21388,964,246-3.3873.967CBFA2T3ENSG00000129993.15Distal intron
chr1070,747,30370,747,368+3.6173.022ADAMTS14ENSG00000138316.11Distal intron
chr1623,937,67523,937,727+3.1453.836PRKCBENSG00000166501.14Distal intron
chr1750,738,20150,738,279+4.6043.493LUC7L3ENSG00000108848.16Distal intron
chr1750,738,12250,738,145+5.4673.063LUC7L3ENSG00000108848.16Distal intron
chr1750,738,07150,738,122+7.0823.061LUC7L3ENSG00000108848.16Distal intron
chr1750,738,14550,738,177+4.8693.042LUC7L3ENSG00000108848.16Distal intron
chr181,287,4701,287,553-3.1793.766LINC00470ENSG00000132204.14ncRNA
chr1219,199,474219,199,499+4.6293.423LYPLAL1ENSG00000143353.12Distal intron
chr817,957,54217,957,625+4.0223.103PCM1ENSG00000078674.19CDS
chrX154,684,815154,684,918-3.3803.726GAB3ENSG00000160219.12Distal intron
chr1131,493,47331,493,609-3.2083.186IMMP1LENSG00000148950.11Distal intron
chr36,548,3986,548,460+7.8734.751ENSG00000189229ENSG00000189229.12ncRNA
chr9123,266,656123,266,725-4.6624.121STRBPENSG00000165209.19Distal intron
chr2249,502,01949,502,096-3.6173.116MIR3667HGENSG00000188511.14ncRNA
chr2216,645,63216,645,694+4.0203.998TPTEP1ENSG00000100181.22ncRNA
chr2249,603,97249,604,043-3.3803.726MIR3667HGENSG00000188511.14ncRNA
chr554,362,37154,362,431+3.1793.788LINC01033ENSG00000249069.8ncRNA
chr2247,852,81747,852,902+3.8083.869EPIC1ENSG00000224271.8ncRNA
chr36,575,0916,575,175+6.6954.213ENSG00000189229ENSG00000189229.12ncRNA
chr1231,037,775231,037,851-3.1453.724FAM89AENSG00000182118.8Distal intron
chr455,598,61155,598,652-3.5933.137NMUENSG00000109255.11Proximal intron
chr2151,464,790151,464,901+6.4713.203RIF1ENSG00000080345.18CDS
chr107,223,0397,223,114-3.3803.774SFMBT2ENSG00000198879.13Distal intron
chr7127,931,610127,931,687+6.2503.648SND1ENSG00000197157.11Distal intron
chr2220,558,72320,558,792+5.2383.432MED15ENSG00000099917.17Distal intron
chr2035,027,20935,027,331-5.6243.578TRPC4APENSG00000100991.12Distal intron
chr342,637,51242,637,546+4.2283.382NKTRENSG00000114857.19CDS
chr1530,670,50930,670,660+3.6253.215ENSG00000284906ENSG00000284906.3Distal intron
chr2161,186,094161,186,184+3.1453.748TANKENSG00000136560.14Distal intron
chr1476,206,53776,206,668+3.1853.721GPATCH2LENSG00000089916.183' UTR
chr1165,500,03365,500,046+400.0003.192MALAT1ENSG00000251562.10ncRNA
chrX154,683,433154,683,546-3.2133.032GAB3ENSG00000160219.12Distal intron
chr9123,268,329123,268,396-5.9584.540STRBPENSG00000165209.195' splice site
chr2247,853,84647,853,934+3.1453.621EPIC1ENSG00000224271.8ncRNA
chr1770,110,35270,110,476-5.2293.885ENSG00000230258ENSG00000230258.6ncRNA
chr2146,548,73746,548,819+4.6393.463DIP2AENSG00000160305.18Distal intron
chr687,256,01687,256,121+4.0283.141ZNF292ENSG00000188994.14CDS
chr1193,217,088193,217,169+4.4524.080CDC73ENSG00000134371.14Distal intron
chr1203,798,335203,798,395+7.8833.617ZBED6ENSG00000257315.4CDS
chr7121,247,862121,247,975+3.2093.201CPED1ENSG00000106034.18Distal intron
chr1165,582,05865,582,121+7.7423.904EHBP1L1ENSG00000173442.13CDS
chr1165,581,94565,582,057+9.6023.411EHBP1L1ENSG00000173442.13CDS
chr730,624,77530,624,816+3.3803.751GARS1ENSG00000106105.15Distal intron
chr1213,182,172213,182,242+3.1793.744RPS6KC1ENSG00000136643.12Distal intron
chr1770,110,70770,110,797-4.6043.601ENSG00000230258ENSG00000230258.6ncRNA
chr1074,001,16474,001,236+3.1853.647VCLENSG00000035403.18Distal intron
chr1332,536,10132,536,162-3.8173.224N4BP2L2ENSG00000244754.9CDS
chr112,667,9322,668,011-3.7853.893KCNQ1OT1ENSG00000269821.1ncRNA
chr1165,500,77065,500,777+400.0003.434MALAT1ENSG00000251562.10ncRNA
chr1165,500,78665,500,791+400.0003.421MALAT1ENSG00000251562.10ncRNA
chr1165,500,77865,500,786+400.0003.385MALAT1ENSG00000251562.10ncRNA
chr1165,500,76765,500,770+400.0003.278MALAT1ENSG00000251562.10ncRNA
chr1165,500,76065,500,767+400.0003.247MALAT1ENSG00000251562.10ncRNA
chr1165,500,79165,500,814+400.0003.178MALAT1ENSG00000251562.10ncRNA
chr113,391,7223,391,771+4.0283.122TSSC2ENSG00000223756.8ncRNA
chr1110,952,305110,952,385-4.6293.302LRIF1ENSG00000121931.16CDS
chr1928,611,54728,611,618+9.4343.524ENSG00000266976ENSG00000266976.3ncRNA
chr1620,686,99120,687,073+8.0503.145ACSM3ENSG00000005187.12Distal intron
chr2138,113,19638,113,276-4.4334.204KCNJ6ENSG00000157542.11Distal intron
chr1688,957,07088,957,163-3.2133.117CBFA2T3ENSG00000129993.15Proximal intron
chr1781,577,27781,577,330-3.1453.793NPLOC4ENSG00000182446.14Distal intron
chr36,549,5496,549,639+6.4753.347ENSG00000189229ENSG00000189229.12ncRNA
chr86,720,4376,720,499+3.7853.848AGPAT5ENSG00000155189.12Distal intron
chr792,061,28692,061,361+3.6013.845AKAP9ENSG00000127914.19CDS
chr1720,869,95620,869,984+7.6603.540CCDC144NL-AS1ENSG00000233098.10ncRNA
chr1720,869,98420,870,004+4.8293.368CCDC144NL-AS1ENSG00000233098.10ncRNA
chr36,574,5816,574,601+5.3233.174ENSG00000189229ENSG00000189229.12ncRNA
chr115,461,0665,461,144-6.1514.651HBE1|HBG2ENSG00000196565.15||ENSG00000213931.7Distal intron
chr9123,268,271123,268,328-4.2163.354STRBPENSG00000165209.19Proximal intron
chr115,467,1105,467,159-3.4193.058HBG2|HBE1ENSG00000213931.7||ENSG00000196565.15Distal intron
chr7119,800,422119,800,499-3.2093.155LINC02476ENSG00000225546.6ncRNA
chr1220,208,961220,209,051-4.0223.937RAB3GAP2ENSG00000118873.17Distal intron
chr10131,916,795131,916,855+4.4334.387PPP2R2DENSG00000175470.20Distal intron
chr10131,916,855131,916,923+6.8874.056PPP2R2DENSG00000175470.20Distal intron
chr2144,489,771144,489,817-4.0204.036ZEB2ENSG00000169554.23Distal intron
chr1193,248,016193,248,108+3.3873.748CDC73ENSG00000134371.14Distal intron
chr7153,408,575153,408,625-5.0884.196LINC01287ENSG00000234722.5ncRNA
chr2127,502,299127,502,369-3.5933.435IWS1ENSG00000163166.15Proximal intron
chr510,420,35310,420,457+4.0204.036MARCHF6ENSG00000145495.16Distal intron
chr4767,492767,547-5.0563.093PCGF3-AS1ENSG00000249592.7ncRNA
chr232,203,81932,203,889+3.6253.080DDX50P1ENSG00000229816.1ncRNA
chr1165,500,72465,500,729+400.0003.280MALAT1ENSG00000251562.10ncRNA
chr1165,500,72965,500,736+400.0003.237MALAT1ENSG00000251562.10ncRNA
chr1165,500,71065,500,724+400.0003.197MALAT1ENSG00000251562.10ncRNA
chr1165,500,73665,500,760+400.0003.184MALAT1ENSG00000251562.10ncRNA
chr1688,517,84788,517,961+6.1694.673ZFPM1ENSG00000179588.9Distal intron
chr2249,543,49049,543,570-3.1793.697hsa-mir-3667MI0016068miRNA
chr7158,775,411158,775,470-5.5264.380ESYT2ENSG00000117868.18Distal intron
chr1155,478,108155,478,166-3.5973.188ASH1LENSG00000116539.14CDS
chr2046,359,08546,359,199-3.6063.908SLC35C2ENSG00000080189.15Proximal intron
chr3195,692,358195,692,486+3.5973.610MUC20-OT1ENSG00000242086.8ncRNA
chr1391,348,60391,348,651+3.5933.119MIR17HGENSG00000215417.13ncRNA
chr2223,265,15123,265,234+3.6013.823BCRENSG00000186716.21Distal intron
chr7119,797,901119,797,972-4.4394.315LINC02476ENSG00000225546.6ncRNA
chr1214,641,609214,641,657+3.7853.848CENPFENSG00000117724.14CDS
chr1165,500,66265,500,667+400.0003.728MALAT1ENSG00000251562.10ncRNA
chr1165,500,65865,500,661+400.0003.705MALAT1ENSG00000251562.10ncRNA
chr129,179,26329,179,293-6.6064.719SRSF4ENSG00000116350.18Distal intron
chr129,179,29329,179,321-8.4873.329SRSF4ENSG00000116350.18Distal intron
chr220,292,12020,292,211-3.3803.797PUM2ENSG00000055917.16Distal intron
chr7121,277,326121,277,482+4.4394.215CPED1ENSG00000106034.18Distal intron
chr255,025,30855,025,438-10.7793.955RTN4ENSG00000115310.19CDS
chr1165,500,17265,500,185+400.0003.177MALAT1ENSG00000251562.10ncRNA
chr1165,500,14965,500,155+400.0003.080MALAT1ENSG00000251562.10ncRNA
chr1165,500,16565,500,172+400.0003.004MALAT1ENSG00000251562.10ncRNA
chr1165,500,15565,500,165+400.0003.002MALAT1ENSG00000251562.10ncRNA
chr1631,188,07731,188,127+7.4653.206FUSENSG00000089280.19Proximal intron
chr1934,382,81934,382,874+9.0643.603GPIENSG00000105220.17Distal intron
chr129,179,92529,179,972-7.9453.987SRSF4ENSG00000116350.18Distal intron
chr1068,573,98668,574,060+3.6014.145TET1ENSG00000138336.9CDS
chr1202,522,636202,522,768+3.3803.902PPP1R12BENSG00000077157.22Distal intron
chr14101,801,815101,801,894+3.2223.084PPP2R5CENSG00000078304.20Distal intron
chr2035,027,58735,027,654-3.3803.862TRPC4APENSG00000100991.12Distal intron
chr1203,797,775203,797,834+6.9123.819ZBED6ENSG00000257315.4CDS
chr2108,764,409108,764,497+4.0283.291RANBP2ENSG00000153201.17CDS
chr7119,886,105119,886,167-3.8084.312LINC02476ENSG00000225546.6ncRNA
chr6157,313,536157,313,615-6.2583.425TMEM242ENSG00000215712.11Distal intron
chr993,673,13193,673,247+3.1853.697PHF2ENSG00000197724.11Proximal intron
chr1195,824,99695,825,057+4.6393.318CEP57ENSG00000166037.11Distal intron
chr182,736,2802,736,379+6.4603.191SMCHD1ENSG00000101596.17Distal intron
chr115,460,9315,461,014-6.6523.512HBE1|HBG2ENSG00000213931.7||ENSG00000196565.15Distal intron
chr255,025,63555,025,695-5.8553.619RTN4ENSG00000115310.19CDS
chr7119,706,286119,706,353-3.4763.016LINC02476ENSG00000225546.6ncRNA
chr1730,835,69830,835,763+5.0824.197ATAD5ENSG00000176208.9CDS
chr473,233,78673,233,888-4.8434.122ANKRD17ENSG00000132466.20Distal intron
chr1458,266,22458,266,281-5.2523.461PSMA3-AS1ENSG00000257621.9ncRNA
chr2220,558,97920,559,062+5.6673.550MED15ENSG00000099917.17Distal intron
chr1770,109,68270,109,788-3.3804.201ENSG00000230258ENSG00000230258.6ncRNA
chr129,178,97929,179,051-11.6453.332SRSF4ENSG00000116350.18Distal intron
chr2144,399,642144,399,747-4.0223.376ZEB2ENSG00000169554.23CDS
chr11,257,7251,257,850-3.3803.701UBE2J2ENSG00000160087.21Proximal intron
chr2151,464,640151,464,711+6.0383.214RIF1ENSG00000080345.18CDS
chr36,567,3676,567,425+3.5933.101ENSG00000189229ENSG00000189229.12ncRNA
chr7131,473,373131,473,417+3.3803.675MKLN1ENSG00000128585.18Distal intron
chr115,401,2005,401,277-6.5924.536HBG2|HBE1ENSG00000196565.15||ENSG00000213931.7Distal intron
chr115,403,2815,403,329-3.1793.697HBG2|HBE1ENSG00000213931.7||ENSG00000196565.15Distal intron
chr1165,500,61165,500,620+400.0003.299MALAT1ENSG00000251562.10ncRNA
chr1165,500,33265,500,338+400.0003.390MALAT1ENSG00000251562.10ncRNA
chr1165,500,32765,500,332+400.0003.236MALAT1ENSG00000251562.10ncRNA
chr2247,789,55447,789,698+3.6013.947EPIC1ENSG00000224271.8ncRNA
chr4776,990777,058-7.3193.835PCGF3-AS1ENSG00000249592.7ncRNA
chr2144,036,33244,036,405+3.6013.845TRAPPC10ENSG00000160218.13Distal intron
chr36,548,4696,548,594+17.7434.545ENSG00000189229ENSG00000189229.12ncRNA
chr1241,632,575241,632,610-5.4904.426CHMLENSG00000203668.33' UTR
chr1214,640,798214,640,879+3.6173.230CENPFENSG00000117724.14CDS
chr1165,500,69865,500,701+400.0003.563MALAT1ENSG00000251562.10ncRNA
chr1165,500,70165,500,706+400.0003.452MALAT1ENSG00000251562.10ncRNA
chr1165,500,70665,500,710+400.0003.424MALAT1ENSG00000251562.10ncRNA
chr107,350,2497,350,362-4.0223.122SFMBT2ENSG00000198879.13Distal intron
chr1750,739,05650,739,105+3.6064.019LUC7L3ENSG00000108848.16Distal intron
chr1689,300,91389,300,998-4.0204.090ANKRD11ENSG00000167522.17CDS
chr1231,038,269231,038,362-3.1453.914FAM89AENSG00000182118.8Distal intron
chr255,025,18855,025,273-6.8653.473RTN4ENSG00000115310.19CDS
chr1928,504,88828,504,974-16.3573.704ENSG00000283403|ENSG00000267243|ENSG00000266893ENSG00000267243.6||ENSG00000283403.1||ENSG00000266893.1ncRNA
chr1928,445,17028,445,247-4.2093.232ENSG00000283403|ENSG00000267243ENSG00000283403.1||ENSG00000267243.6ncRNA
chr7119,897,404119,897,492-3.5973.308LINC02476ENSG00000225546.6ncRNA
chr2247,752,34947,752,410+3.1793.990EPIC1ENSG00000224271.8ncRNA
chr337,327,12937,327,179+4.4394.098GOLGA4ENSG00000144674.18CDS
chr2144,033,56444,033,681+3.7883.956TRAPPC10ENSG00000160218.13Distal intron
chr1165,500,21465,500,230+400.0003.097MALAT1ENSG00000251562.10ncRNA
chr296,895,00496,895,059-5.6243.508FAM178BENSG00000168754.15Distal intron
chr1720,884,82720,884,921+7.0653.707CCDC144NL-AS1ENSG00000233098.10ncRNA
chr1928,444,44728,444,506-4.0204.090ENSG00000267243|ENSG00000283403ENSG00000283403.1||ENSG00000267243.6ncRNA
chr10117,284,010117,284,092-3.8173.932PDZD8ENSG00000165650.12CDS
chr455,596,88355,596,941-6.8014.704NMUENSG00000109255.11Distal intron
chr6119,269,051119,269,110-3.3873.793MAN1A1ENSG00000111885.7Distal intron
chr1165,500,18565,500,195+400.0003.262MALAT1ENSG00000251562.10ncRNA
chr1165,500,20265,500,208+400.0003.224MALAT1ENSG00000251562.10ncRNA
chr1165,500,19565,500,202+400.0003.158MALAT1ENSG00000251562.10ncRNA
chr1165,500,20865,500,214+400.0003.076MALAT1ENSG00000251562.10ncRNA
chr1928,489,84528,489,892-3.6173.116ENSG00000283403|ENSG00000267243ENSG00000267243.6||ENSG00000283403.1ncRNA
chr39,467,4389,467,504+3.3803.797SETD5ENSG00000168137.20Distal intron
chr56,723,7656,723,827+4.8744.194TENT4AENSG00000112941.14Distal intron
chr2169,636,820169,636,975+4.6693.194PPIGENSG00000138398.17CDS
chr2249,557,69649,557,764-3.7853.995MIR3667HGENSG00000188511.14ncRNA
chr1742,275,25842,275,303-5.0403.487ENSG00000278829ENSG00000278829.1ncRNA
chr12131,734,344131,734,473+5.0884.295SFSWAPENSG00000061936.10Distal intron
chr1934,384,63834,384,708+7.1223.117GPIENSG00000105220.17Distal intron
chr2249,577,85049,577,979-4.2163.459MIR3667HGENSG00000188511.14ncRNA
chr811,808,03811,808,125+5.0824.547FDFT1ENSG00000079459.135' UTR
chr13,739,1313,739,331-9.7363.472TP73-AS1ENSG00000227372.12ncRNA
chr7119,851,874119,851,962-3.6173.301LINC02476ENSG00000225546.6ncRNA
chr129,179,45429,179,474-6.6953.784SRSF4ENSG00000116350.18Distal intron
chr167,208,41867,208,522+3.1793.808IL23RENSG00000162594.17Distal intron
chr1877,983,27577,983,307-5.9484.445ENSG00000264334ENSG00000264334.1ncRNA
chr2108,471,593108,471,679+3.1853.766GCC2ENSG00000135968.22CDS
chr6157,311,213157,311,260-3.3873.700TMEM242ENSG00000215712.11Distal intron
chr1245,896,06945,896,191+3.6253.042ARID2ENSG00000189079.18Distal intron
chr2138,098,54938,098,606-3.5933.220KCNJ6ENSG00000157542.11Distal intron
chr7158,775,603158,775,652-4.2444.252ESYT2ENSG00000117868.18Distal intron
chr7119,704,781119,704,868-4.0204.216LINC02476ENSG00000225546.6ncRNA
chr105,696,3695,696,418+4.8744.542TASOR2ENSG00000108021.22Distal intron
chr81,831,9981,832,142+3.2093.055ARHGEF10ENSG00000104728.16Distal intron
chr271,332,06371,332,163+4.2113.197ZNF638ENSG00000075292.19Proximal intron
chr343,722,14543,722,228+3.8174.124ABHD5ENSG00000011198.103' UTR
chr1877,991,54177,991,580-4.8434.263LINC01029ENSG00000265843.3ncRNA
chr7129,462,160129,462,301+6.3784.478STRIP2ENSG00000128578.10Distal intron
chr113,393,9653,394,023+3.6253.116TSSC2ENSG00000223756.8ncRNA
chr7153,407,644153,407,736-6.1213.016LINC01287ENSG00000234722.5ncRNA
chr663,711,60363,711,669+3.7883.824PHF3ENSG00000118482.12CDS
chr1165,500,29265,500,297+400.0003.117MALAT1ENSG00000251562.10ncRNA
chr1165,500,31065,500,321+400.0003.111MALAT1ENSG00000251562.10ncRNA
chr1165,500,28665,500,291+400.0003.063MALAT1ENSG00000251562.10ncRNA
chr1165,500,29865,500,302+400.0003.057MALAT1ENSG00000251562.10ncRNA
chr1165,500,30565,500,310+400.0003.002MALAT1ENSG00000251562.10ncRNA
chr1928,488,98728,489,015-7.2763.071ENSG00000267243|ENSG00000283403ENSG00000267243.6||ENSG00000283403.1ncRNA
chr1928,489,01528,489,039-6.8723.062ENSG00000283403|ENSG00000267243ENSG00000283403.1||ENSG00000267243.6ncRNA
chr255,026,71055,026,773-7.4573.140RTN4ENSG00000115310.19CDS
chr4768,145768,213-6.2743.697PCGF3-AS1ENSG00000249592.7ncRNA
chr1155,479,645155,479,683-3.1793.721ASH1LENSG00000116539.14CDS
chr7111,440,741111,440,836-3.8163.192IMMP2LENSG00000184903.10Distal intron
chr2108,763,569108,763,619+3.3803.701RANBP2ENSG00000153201.17CDS
chr1928,444,75328,444,816-4.2373.980ENSG00000267243|ENSG00000283403ENSG00000267243.6||ENSG00000283403.1ncRNA
chr4767,919767,991-7.2923.942PCGF3-AS1ENSG00000249592.7ncRNA
chr1934,385,47234,385,509+7.5783.276GPIENSG00000105220.17Distal intron
chr1620,676,19220,676,253+3.3804.133ACSM3ENSG00000005187.12Distal intron
chr338,226,10338,226,132+3.1453.748OXSR1ENSG00000172939.9Distal intron
chr2137,100,46037,100,557+4.4344.002TTC3ENSG00000182670.14Distal intron
chr7121,230,925121,230,971+3.1453.648CPED1ENSG00000106034.18Distal intron
chr1928,615,11328,615,153+9.4434.122ENSG00000266976ENSG00000266976.3ncRNA
chr115,458,8315,458,879-4.8293.353HBE1|HBG2ENSG00000196565.15||ENSG00000213931.7Distal intron
chr2134,865,46034,865,528-3.1793.621RUNX1ENSG00000159216.19Distal intron
chr7102,866,373102,866,454-3.1454.212FBXL13ENSG00000161040.18Distal intron
chr36,549,7436,549,784+4.0204.186ENSG00000189229ENSG00000189229.12ncRNA
chr9131,204,936131,204,969+7.0443.373NUP214ENSG00000126883.19Distal intron
chr2249,607,63749,607,723-4.6293.302MIR3667HGENSG00000188511.14ncRNA
chr1742,274,86642,274,931-5.4573.444ENSG00000278829ENSG00000278829.1ncRNA
chr1220,266,532220,266,614-3.1793.766RAB3GAP2ENSG00000118873.17Distal intron
chr115,489,3865,489,484-6.6713.273HBG2|HBE1ENSG00000196565.15||ENSG00000213931.7Distal intron
chr181,362,1701,362,234-5.0403.600LINC00470ENSG00000132204.14ncRNA
chr121,686,72921,686,814-4.4394.215USP48ENSG00000090686.16Proximal intron
chr255,026,28655,026,344-10.0635.023RTN4ENSG00000115310.19CDS
chr255,026,18955,026,286-10.4924.458RTN4ENSG00000115310.19CDS
chr1165,500,64865,500,655+400.0003.601MALAT1ENSG00000251562.10ncRNA
chr1165,500,63765,500,647+400.0003.512MALAT1ENSG00000251562.10ncRNA
chr1165,500,63165,500,635+400.0003.391MALAT1ENSG00000251562.10ncRNA
chr1165,500,62465,500,630+400.0003.366MALAT1ENSG00000251562.10ncRNA
chr1165,500,62065,500,624+400.0003.356MALAT1ENSG00000251562.10ncRNA
chr1165,500,63565,500,637+400.0003.307MALAT1ENSG00000251562.10ncRNA
chr19879,209879,369-7.7424.032MED16ENSG00000175221.16Distal intron
chr36,582,9676,583,043+3.3803.976ENSG00000189229ENSG00000189229.12ncRNA
chr106,175,3816,175,498+4.4303.233PFKFB3ENSG00000170525.21Distal intron
chr344,447,39244,447,463-3.3873.771ZNF445ENSG00000185219.18CDS
chr9133,273,620133,273,720-4.4303.391ABOENSG00000175164.16Distal intron
chr255,023,36955,023,438-5.2523.490RTN4ENSG00000115310.19Distal intron
chr1720,885,16220,885,265+10.7793.998CCDC144NL-AS1ENSG00000233098.10ncRNA
chr1720,885,26520,885,308+4.4263.347CCDC144NL-AS1ENSG00000233098.10ncRNA
chr7119,869,848119,869,927-4.0223.335LINC02476ENSG00000225546.6ncRNA
chr189,216,0409,216,081+3.6253.379ANKRD12ENSG00000101745.17Distal intron
chr5181,256,906181,256,980+8.2834.800CTC-338M12.4ENSG00000233937.9ncRNA
chr7119,786,639119,786,721-3.5973.002LINC02476ENSG00000225546.6ncRNA
chr36,549,0826,549,126+7.8693.355ENSG00000189229ENSG00000189229.12ncRNA
chr825,491,80725,491,859+3.0233.197CDCA2ENSG00000184661.14Distal intron
chr121,682,15321,682,268-3.1793.940USP48ENSG00000090686.16Distal intron
chr417,932,76617,932,884-4.8434.142LCORLENSG00000178177.17Distal intron
chr1214,640,508214,640,573+6.3784.478CENPFENSG00000117724.14CDS
chr2137,467,24937,467,271+5.2523.640DYRK1AENSG00000157540.22Distal intron
chr2137,467,27137,467,305+4.6693.125DYRK1AENSG00000157540.22Distal intron
chr7119,706,446119,706,514-3.6873.044LINC02476ENSG00000225546.6ncRNA
chr9131,207,558131,207,591+3.5973.220NUP214ENSG00000126883.19Distal intron
chr1110,948,233110,948,300-4.2444.001LRIF1ENSG00000121931.16CDS
chr1236,803,063236,803,150+3.8083.952MTRENSG00000116984.15Proximal intron
chr64,031,9014,031,996+3.2083.171PRPF4BENSG00000112739.17CDS
chr343,722,49643,722,563+6.8933.774ABHD5ENSG00000011198.103' UTR
chr343,722,56343,722,617+3.2133.032ABHD5ENSG00000011198.103' UTR
chr2138,099,60538,099,693-5.6473.271DSCR4ENSG00000184029.9ncRNA
chr792,002,26892,002,333+4.2093.232AKAP9ENSG00000127914.19CDS
chr1165,500,09465,500,097+400.0003.202MALAT1ENSG00000251562.10ncRNA
chr1165,500,08565,500,094+400.0003.160MALAT1ENSG00000251562.10ncRNA
chr1165,500,10665,500,116+400.0003.132MALAT1ENSG00000251562.10ncRNA
chr1165,500,08365,500,085+400.0003.129MALAT1ENSG00000251562.10ncRNA
chr1165,500,11665,500,124+400.0003.110MALAT1ENSG00000251562.10ncRNA
chr1165,500,07665,500,083+400.0003.086MALAT1ENSG00000251562.10ncRNA
chr1165,500,09765,500,106+400.0003.064MALAT1ENSG00000251562.10ncRNA
chr1165,500,12465,500,127+400.0003.042MALAT1ENSG00000251562.10ncRNA
chr890,006,46990,006,546+3.3803.701DECR1ENSG00000104325.7Proximal intron
chr1145,773,404145,773,453-6.6523.619RNF115ENSG00000265491.5Distal intron
chr1720,898,49620,898,560+3.8084.026CCDC144NL-AS1ENSG00000233098.10ncRNA
chr1631,188,14531,188,175+6.0683.154FUSENSG00000089280.19Proximal intron
chr841,788,82841,788,939-3.4223.193ANK1ENSG00000029534.21Distal intron
chr140,417,24340,417,323+5.0693.093SMAP2ENSG00000084070.12Proximal intron
chr797,861,28397,861,361-3.1793.647ASNSENSG00000070669.17Distal intron
chr2138,098,76338,098,839-4.2113.314DSCR4ENSG00000184029.9ncRNA
chr2216,639,39316,639,464+3.2093.230TPTEP1ENSG00000100181.22ncRNA
chr417,932,62717,932,690-3.6013.776LCORLENSG00000178177.17Distal intron
chr1934,385,67734,385,745+9.9693.086GPIENSG00000105220.17Distal intron
chr1245,927,24345,927,309-3.6173.133SCAF11ENSG00000139218.18CDS
chr86,718,6856,718,777+3.5933.137AGPAT5ENSG00000155189.12Distal intron
chr1623,937,97323,938,038+4.6624.343PRKCBENSG00000166501.14Distal intron
chr1730,835,82230,835,917+5.4263.023ATAD5ENSG00000176208.9CDS
chr2044,975,52044,975,608+3.3803.726STK4ENSG00000101109.13Distal intron
chr1957,859,52357,859,618+3.6173.080ZNF587ENSG00000198466.12CDS
chr36,569,7326,569,815+3.2093.244ENSG00000189229ENSG00000189229.12ncRNA
chr115,403,0795,403,174-6.8893.022HBG2|HBE1ENSG00000213931.7||ENSG00000196565.15Distal intron
chr343,554,66243,554,802-3.0283.060ANO10ENSG00000160746.13Proximal intron
chr1934,385,99934,386,043+5.7513.059GPIENSG00000105220.17Distal intron
chrX136,873,345136,873,419-4.8343.467RBMXENSG00000147274.14Distal intron
chr181,366,1561,366,230-6.2893.634LINC00470ENSG00000132204.14ncRNA
chr841,741,53341,741,584-5.6673.627ANK1ENSG00000029534.21Distal intron
chr2249,625,01749,625,146-4.0283.260MIR3667HGENSG00000188511.14ncRNA
chr1203,799,483203,799,555+5.4263.114ZBED6ENSG00000257315.4CDS
chr7119,899,881119,900,012-5.8573.141LINC02476ENSG00000225546.6ncRNA
chr106,164,1006,164,223+3.6173.042PFKFB3ENSG00000170525.215' splice site
chr1928,505,68528,505,749-8.0873.458ENSG00000266893|ENSG00000267243|ENSG00000283403ENSG00000267243.6||ENSG00000283403.1||ENSG00000266893.1ncRNA
chr890,311,73690,311,863+4.4394.116LINC00534ENSG00000253394.7ncRNA
chr255,026,40155,026,551-10.9233.508RTN4ENSG00000115310.19CDS
chr12132,816,956132,817,104-3.6013.776GOLGA3ENSG00000090615.16Proximal intron
chr115,468,3555,468,454-7.2733.287HBG2|HBE1ENSG00000213931.7||ENSG00000196565.15Distal intron
chr730,623,92930,623,975+3.6013.866GARS1ENSG00000106105.15Distal intron
chr6157,312,799157,312,827-3.1853.697TMEM242ENSG00000215712.11Distal intron
chr7158,791,320158,791,372-4.2283.247ESYT2ENSG00000117868.18Distal intron
chr716,269,37516,269,421+3.1453.648CRPPA-AS1ENSG00000229688.8ncRNA
chr1165,500,04665,500,063+400.0003.172MALAT1ENSG00000251562.10ncRNA
chr1165,500,06765,500,076+400.0003.139MALAT1ENSG00000251562.10ncRNA
chr1165,500,06365,500,067+400.0003.077MALAT1ENSG00000251562.10ncRNA
chr140,237,92840,238,053+5.4573.159RLFENSG00000117000.9CDS
chr1527,143,25527,143,306+3.6173.042GABRG3ENSG00000182256.13Distal intron
chr36,575,3636,575,386+5.7223.186ENSG00000189229ENSG00000189229.12ncRNA
chr6147,345,782147,345,874+3.8084.140STXBP5ENSG00000164506.15Distal intron
chr1155,481,322155,481,394-4.0223.320ASH1LENSG00000116539.14CDS
chr9130,812,798130,812,958+5.8643.165ABL1ENSG00000097007.19Distal intron
chr2144,774,79244,774,926-7.6743.176UBE2G2ENSG00000184787.19Distal intron
chr1782,836,89682,837,028+3.8083.800TBCDENSG00000141556.22Distal intron
chr1165,500,37765,500,380+400.0003.413MALAT1ENSG00000251562.10ncRNA
chr1165,500,38065,500,387+400.0003.264MALAT1ENSG00000251562.10ncRNA
chr1165,500,39865,500,412+400.0003.156MALAT1ENSG00000251562.10ncRNA
chr145,607,88845,607,966+9.2983.445NASPENSG00000132780.17CDS
chr145,607,86145,607,888+7.5783.374NASPENSG00000132780.17CDS
chr536,985,24836,985,310+4.0283.260NIPBLENSG00000164190.19CDS
chr2144,491,309144,491,359-4.6393.380ZEB2ENSG00000169554.23Distal intron
chr1623,937,54523,937,646+4.8293.457PRKCBENSG00000166501.14Distal intron
chr2249,514,96349,515,038-3.1793.721MIR3667HGENSG00000188511.14ncRNA
chr12122,087,414122,087,470+3.3873.836MLXIPENSG00000175727.14Distal intron
chr1241,634,036241,634,075-5.2523.432CHMLENSG00000203668.3CDS
chr7119,705,119119,705,195-5.3054.543LINC02476ENSG00000225546.6ncRNA
chr1729,287,58729,287,646-3.7884.013NUFIP2ENSG00000108256.9CDS
chr7158,776,317158,776,444-8.1644.075ESYT2ENSG00000117868.18Distal intron
chr36,574,2966,574,341+3.5973.137ENSG00000189229ENSG00000189229.12ncRNA
chr730,623,98830,624,049+4.8293.368GARS1ENSG00000106105.15Distal intron
chr1165,500,69465,500,698+400.0003.667MALAT1ENSG00000251562.10ncRNA
chr1165,500,68665,500,690+400.0003.665MALAT1ENSG00000251562.10ncRNA
chr1165,500,68365,500,686+400.0003.661MALAT1ENSG00000251562.10ncRNA
chr1165,500,69065,500,694+400.0003.587MALAT1ENSG00000251562.10ncRNA
chr3160,433,106160,433,148+4.0223.487SMC4ENSG00000113810.16CDS
chr1623,938,11623,938,195+5.5124.538PRKCBENSG00000166501.14Distal intron
chr1623,938,05423,938,116+4.2113.314PRKCBENSG00000166501.14Distal intron
chr2219,444,38619,444,458-5.0403.385C22orf39ENSG00000242259.9CDS
chrX136,872,750136,872,796-3.8173.990RBMXENSG00000147274.14Proximal intron
chr115,461,5705,461,680-5.8933.043HBE1|HBG2ENSG00000213931.7||ENSG00000196565.15Distal intron
chr1063,213,72263,213,800-4.2373.980JMJD1CENSG00000171988.20CDS
chr1877,976,43577,976,502-5.1173.030LINC01029ENSG00000265843.3ncRNA
chr890,005,26690,005,339+3.6063.887DECR1ENSG00000104325.75' UTR
chr7119,798,579119,798,634-4.2374.208LINC02476ENSG00000225546.6ncRNA
chr333,547,57733,547,673-4.8434.310CLASP2ENSG00000163539.18Distal intron
chr333,547,50933,547,577-3.3803.774CLASP2ENSG00000163539.18Distal intron
chr1203,798,062203,798,151+5.4673.124ZBED6ENSG00000257315.4CDS
chr342,638,87542,638,913+5.3054.362NKTRENSG00000114857.19CDS
chr787,869,47187,869,541-3.2093.072SLC25A40ENSG00000075303.13Distal intron
chr2143,744,23643,744,284+7.6703.140PDXKENSG00000160209.19Proximal intron
chr2144,491,508144,491,573-3.2083.055ZEB2ENSG00000169554.23Distal intron
chr8129,548,910129,548,956-3.8083.912CCDC26ENSG00000229140.12ncRNA
chr1195,825,23795,825,300+3.3873.724CEP57ENSG00000166037.11Distal intron
chr105,697,0245,697,075+3.3873.700TASOR2ENSG00000108021.22Distal intron
chr852,656,63552,656,738-6.8873.810RB1CC1ENSG00000023287.13CDS
chr2151,463,476151,463,520+3.8173.869RIF1ENSG00000080345.18CDS
chr1165,500,37365,500,377+400.0003.636MALAT1ENSG00000251562.10ncRNA
chr1165,500,36965,500,372+400.0003.595MALAT1ENSG00000251562.10ncRNA
chr1165,500,35565,500,369+400.0003.578MALAT1ENSG00000251562.10ncRNA
chr115,402,8035,402,881-7.5253.859HBE1|HBG2ENSG00000213931.7||ENSG00000196565.15Distal intron
chr181,365,1181,365,169-4.6624.083LINC00470ENSG00000132204.14ncRNA
chr129,179,67529,179,700-4.8293.320SRSF4ENSG00000116350.18Distal intron
chr129,179,59529,179,675-11.2273.200SRSF4ENSG00000116350.18Distal intron
chr2035,027,43435,027,531-3.4223.021TRPC4APENSG00000100991.12Distal intron
chr2247,767,06847,767,150+3.3804.059EPIC1ENSG00000224271.8ncRNA
chr1153,636,895153,637,008+3.5933.308CHTOPENSG00000160679.13Proximal intron
chr7121,209,162121,209,213+4.8293.640CPED1ENSG00000106034.18Distal intron
chr145,608,55845,608,589+4.8434.122NASPENSG00000132780.17Proximal intron
chr1114,285,26414,285,392-4.8434.483RRAS2ENSG00000133818.14Distal intron
chrX154,676,429154,676,546-4.4693.109GAB3ENSG00000160219.123' UTR
chr683,167,95583,168,056-3.3873.793PGM3ENSG00000013375.173' UTR
chr1819,858819,989-3.8173.157ENSG00000230021ENSG00000230021.10ncRNA
chr3195,692,935195,693,007+3.8163.224MUC20-OT1ENSG00000242086.8ncRNA
chr1735,810,86135,810,902+3.3803.751TAF15ENSG00000270647.7Distal intron
chr9123,268,519123,268,569-3.8163.192STRBPENSG00000165209.195' UTR
chr1165,971,65965,971,869+4.6393.350SART1ENSG00000175467.15Distal intron
chr36,549,8596,549,933+6.6523.487ENSG00000189229ENSG00000189229.12ncRNA
chr181,363,1291,363,200-3.2093.347ENSG00000265417ENSG00000265417.1ncRNA
chr1730,834,45030,834,537+6.1454.463ATAD5ENSG00000176208.9CDS
chr1720,897,24120,897,306+3.6013.965CCDC144NL-AS1ENSG00000233098.10ncRNA
chr115,403,6875,403,729-3.3803.774HBG2|HBE1ENSG00000196565.15||ENSG00000213931.7Distal intron
chr18245,409245,546-5.2593.022THOC1ENSG00000079134.13Distal intron
chr2249,549,44549,549,584-4.0223.622MIR3667HGENSG00000188511.14ncRNA
chr6157,924,608157,924,706+4.2374.001HSPE1P26ENSG00000220867.1ncRNA
chr2144,037,23144,037,361+4.8744.320TRAPPC10ENSG00000160218.13Proximal intron
chr12131,758,395131,758,468+3.1793.594SFSWAPENSG00000061936.10Distal intron
chr7119,706,958119,707,041-5.8573.314LINC02476ENSG00000225546.6ncRNA
chr7119,797,033119,797,148-4.0653.291LINC02476ENSG00000225546.6ncRNA
chr1877,976,59477,976,685-12.0573.908LINC01029ENSG00000265843.3ncRNA
chr1214,640,573214,640,661+6.5584.766CENPFENSG00000117724.14CDS
chr1165,500,35165,500,355+400.0003.510MALAT1ENSG00000251562.10ncRNA
chr1165,500,33865,500,351+400.0003.397MALAT1ENSG00000251562.10ncRNA
chr7158,776,184158,776,245-4.0283.291ESYT2ENSG00000117868.18Distal intron
chr765,901,66965,901,784+4.2163.179VKORC1L1ENSG00000196715.7Distal intron
chr1527,100,96027,101,083+5.3124.251GABRG3ENSG00000182256.13Distal intron
chr1207,761,601207,761,694+4.4303.316CD46ENSG00000117335.21Proximal intron
chr1647,630,54347,630,633+3.1793.868PHKBENSG00000102893.18Distal intron
chr1165,500,57365,500,588+400.0003.035MALAT1ENSG00000251562.10ncRNA
chr1359,928,90259,929,020-3.2133.324DIAPH3ENSG00000139734.19Distal intron

The following tables contain identified motifs, where a motif is a short sequence of nucleotides that is significantly enriched in called peaks. Motifs were identified using HOMER's findMotifsGenome.pl tool. Motifs were called at multiple lengths, and results from all examined lengths are aggregated in the tables.

The following columns are included in the tables:

  •  Motif: logo plot for the identified motif.
  •  IUPAC: sequence of motif in IUPAC code.
  •  Motif length: length of the called motif.
  •  P-value: Significance of the called motif.
  •  -log10(p-value): log transformed significance, a larger number indicates a greater significance.
  •  % Peaks: percent of examined peaks with the identified motif.
  •  % Background: percent of non-peak background regions with the motif.

Please note, this table is interactive. You can search for specific sequences, and can sort the table by any of the columns. The search buttons at thr bottom of the tables allow for specific filtering by sequence or motif length.

ENCSR337XGI (HepG2) Motifs


Motif IUPAC sequence Motif length P-value -log10(p-value) % Peaks % Background
UGGRGCACAGGG121e-1943.862.50.0
CUACAGGUCAAU121e-1639.022.50.01
ACAGGGACUA101e-1434.182.50.01
GGUGGARUGACA121e-1433.494.640.16
CAAUGGAGGU101e-1330.011.790.0


ENCSR484LAB (K562) Motifs


Motif IUPAC sequence Motif length P-value -log10(p-value) % Peaks % Background
UGGKUGUGGGKA121e-1229.71.190.0