EIF3D


This analysis report summarizes EIF3D eCLIP data from ENCODE. The current tab provides an overview of the results, and the other tabs list identified peaks and motifs.

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Experiment Summary


Experiment ID File ID Sample Antibody source Antibody ID Antibody lot Release date Laboratory Number of peaks
ENCSR041NUVENCFF056UAWHepG2Bethyl LabsA301-758A12016-04-26Gene Yeo, UCSD818

EIF3D Peak Assignments


The following plots show the assignment of peaks into different genic features:

Introns contain other subdivisions, please see the subsequent plot for a breakdown of those features.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

EIF3D Intron Assignments


The following plots show the assignment of peaks into different intronic features:

  •  5’ splice site: the peak is within the first 100 bp of an intron (5’ to 3’ direction
  •  3’ splice site: the peak is within the last 100 bp of an intron (5’ to 3’ direction)
  •  Proximal intron: the peak is within 100 bp to 500 bp of the nearest exon
  •  Distal intron: greater than 500 bp away from the nearest exon

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

EIF3D Motifs


The following plot shows a summary of the top five motifs by significance in each experiment. Motifs were detected with varying length parameters, you may observe a similar motif with different number of bases included multiple times. A motif present in more peaks and with a higher significance will be in the upper right quadrant of the plot, while the lower left quadrant has motifs that are less significant and in fewer peaks.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.



The following table contains called EIF3D peaks. To identify peaks, clusters (regions of read enrichment) in the immunoprecipitated (IP) samples were found using the peak calling tool CLIPper. To account for background signal, a cluster was identified as a peak if the log2 fold enrichment over input was ≥ 3 and the p-value ≤ 0.001.

Peaks were annotated using transcript information from GENCODE. Each annotated peak is labeled with specific annotation feature types, first split by coding and non-coding transcripts, then by transcript regions, and then by intron/exon proximity regions. For overlapping transcript regions, the following hierarchy is used to label the region: coding sequence (CDS), 5’ or 3’ untranslated region (UTR), intron, non-coding exon, then non-coding intron. For example, if a peak is in the 5’ UTR of one transcript that overlaps an intron of another transcript, the peak region will be labeled as 5’ UTR. All gene annotations are from GENCODE release v41.

The following columns are included in the table:

  •  Chromosome: chromosome where the peak is located.
  •  Peak start: start coordinate for the peak.
  •  Peak stop: stop coordinate for the peak.
  •  Strand: strand of DNA where the peak was called.
  •  -log10(p-value): significance of the cluster call by CLIPper. Values are log transformed so a larger number indicates a greater significance.
  •  log2(fold change): log transformed fold enrichment of the IP signal over a matched input.
  •  Gene name: name (symbol) of the gene that overlaps with the peak.
  •  Ensembl ID: unique identifer of the gene that overlaps with the peak.
  •  Feature: which part of the listed gene overlaps with the peak.

Please note, this table is interactive. You can search for specific genes or features, and can sort the table by any of the columns.

ENCSR041NUV (HepG2) Peaks


Chromosome Peak start Peak stop Strand -log10(p-value) log2(fold change) Gene name Ensembl ID Feature
chr2025,458,49625,458,529-3.6213.489NINLENSG00000101004.15CDS
chr9134,350,207134,350,264+4.8623.170RXRAENSG00000186350.12Distal intron
chr17241,899241,954-4.1383.450RPH3ALENSG00000181031.16Distal intron
chr2200,811,955200,811,991+4.1673.217BZW1ENSG00000082153.185' UTR
chr631,631,74031,631,753+3.3493.193PRRC2AENSG00000204469.13CDS
chr191,980,6271,980,675+3.7793.969CSNK1G2ENSG00000133275.163' UTR
chr1782,000,31882,000,397+18.8273.280ASPSCR1ENSG00000169696.16Distal intron
chr119,152,38419,152,435-10.6043.008UBR4ENSG00000127481.15CDS
chr8141,412,419141,412,472+4.5643.444PTP4A3ENSG00000184489.13Distal intron
chr2145,427,27245,427,319+4.5164.460COL18A1ENSG00000182871.16Distal intron
chr2145,434,72545,434,785+3.2703.063COL18A1ENSG00000182871.16Distal intron
chr10132,364,366132,364,476+8.7844.508LRRC27ENSG00000148814.18Distal intron
chr1942,292,95742,292,992+4.5164.260CICENSG00000079432.9CDS
chr1780,288,23980,288,316+4.1383.562RNF213ENSG00000173821.20CDS
chr1669,567,21469,567,299+3.8793.339NFAT5ENSG00000102908.23Distal intron
chr1528,192,08828,192,140-3.3493.227HERC2ENSG00000128731.18CDS
chr332,839,14632,839,188+3.3493.082TRIM71ENSG00000206557.6Distal intron
chr452,712,82252,712,845+3.2703.314hsa-mir-4449MI0016792miRNA
chr2161,367,473161,367,519+3.7794.010PSMD14ENSG00000115233.12CDS
chr139,451,08039,451,174+7.0483.330MACF1ENSG00000127603.32CDS
chr3129,562,789129,562,835-3.2844.041PLXND1ENSG00000004399.13CDS
chr1205,749,960205,750,031-23.3553.530NUCKS1ENSG00000069275.13CDS
chr139,435,68639,435,757+5.0083.254MACF1ENSG00000127603.32CDS
chr39,470,7999,470,846+4.0793.355SETD5ENSG00000168137.20CDS
chr899,102,95299,102,995+4.3604.187VPS13BENSG00000132549.20CDS
chr9134,365,085134,365,134+5.2883.634RXRAENSG00000186350.12Distal intron
chr119,186,54019,186,576-6.1173.248UBR4ENSG00000127481.15CDS
chr1688,499,71288,499,771+3.2623.798ZFPM1ENSG00000179588.9Distal intron
chr162,103,2882,103,348-4.0793.616PKD1ENSG00000008710.20CDS
chr1719,062,08019,062,133+6.5884.971SNORD3B-1ENSG00000265185.6ncRNA
chr847,855,36347,855,373-4.3223.415PRKDCENSG00000253729.9CDS
chr261,394,86961,394,910-6.5423.500USP34ENSG00000115464.15CDS
chrX40,096,06640,096,120-4.0844.116BCORENSG00000183337.185' UTR
chr1525,082,62825,082,708+11.1954.048SNHG14ENSG00000224078.15ncRNA
chr338,454,72138,454,772+3.7793.969ACVR2BENSG00000114739.14Proximal intron
chr1942,289,86642,289,910+3.5323.886CICENSG00000079432.9CDS
chr7152,154,022152,154,091-3.3653.450KMT2CENSG00000055609.21CDS
chr10112,180,471112,180,515-4.8063.529GPAMENSG00000119927.14CDS
chr1525,106,16425,106,295+8.1363.413SNHG14ENSG00000224078.15ncRNA
chr12122,568,337122,568,372+5.7183.763KNTC1ENSG00000184445.12CDS
chr194,037,3194,037,377+6.2843.538PIAS4ENSG00000105229.7CDS
chr232,485,64232,485,669+5.1873.819BIRC6ENSG00000115760.16CDS
chr4122,947,272122,947,370+3.8094.041SPATA5ENSG00000145375.9CDS
chr4122,947,370122,947,444+3.1063.047SPATA5ENSG00000145375.9CDS
chr679,025,94579,026,016-3.1113.074PHIPENSG00000146247.15CDS
chr194,034,5394,034,641+6.6423.096PIAS4ENSG00000105229.7Distal intron
chr12122,569,680122,569,753+7.2523.480KNTC1ENSG00000184445.12CDS
chr663,572,45463,572,515+6.5943.630PTP4A1|ENSG00000285976ENSG00000285976.2||ENSG00000112245.135' UTR
chrX123,633,953123,634,023-3.5354.301THOC2ENSG00000125676.20CDS
chr1460,734,79760,734,885+3.3493.082MNAT1ENSG00000020426.11CDS
chrX153,971,143153,971,200-4.5144.324HCFC1ENSG00000172534.145' UTR
chr7157,775,257157,775,317-5.1874.100PTPRN2ENSG00000155093.19Distal intron
chr2248,585,99748,586,101+4.5644.116TAFA5ENSG00000219438.9Distal intron
chr17314,793314,847-5.7184.549RPH3ALENSG00000181031.16Distal intron
chr17314,737314,793-8.6344.366RPH3ALENSG00000181031.16Distal intron
chr10651,796651,846-3.5324.116DIP2CENSG00000151240.17Distal intron
chr9125,241,118125,241,167-41.3793.097HSPA5ENSG00000044574.9CDS
chr1021,586,32121,586,340+3.5193.423MLLT10ENSG00000078403.17CDS
chr3197,516,563197,516,674-3.8094.940BDH1ENSG00000161267.12Distal intron
chr162,099,8642,099,920-5.5744.743PKD1ENSG00000008710.20CDS
chrX80,691,11080,691,175-3.1113.345BRWD3ENSG00000165288.11CDS
chr1742,017,33942,017,437-4.0254.047DNAJC7ENSG00000168259.17CDS
chr2152,676,544152,676,612-4.5643.605PRPF40AENSG00000196504.21CDS
chr1717,143,60117,143,664+3.2843.845MPRIPENSG00000133030.22CDS
chr12122,586,713122,586,754+3.3653.148KNTC1ENSG00000184445.12CDS
chr9136,443,886136,443,900-3.2844.006SEC16AENSG00000148396.19CDS
chr89,772,3529,772,415+6.5204.032TNKSENSG00000173273.16CDS
chr89,772,2039,772,335+7.7893.802TNKSENSG00000173273.163' splice site
chr4150,914,291150,914,342-5.9843.769LRBAENSG00000198589.15CDS
chr162,102,8602,102,970-6.6963.326PKD1ENSG00000008710.20CDS
chr12123,513,439123,513,540-24.0825.479RILPL1ENSG00000188026.13Distal intron
chr12123,513,299123,513,365-20.1514.895RILPL1ENSG00000188026.13Distal intron
chr12123,513,217123,513,299-19.4124.453RILPL1ENSG00000188026.13Distal intron
chr12123,513,372123,513,439-13.9824.335RILPL1ENSG00000188026.13Distal intron
chr1879,915,23579,915,297-3.8793.339SLC66A2ENSG00000122490.19Distal intron
chr12112,239,170112,239,238-6.2523.909HECTD4ENSG00000173064.14CDS
chr1688,478,86088,478,916+3.2844.041ZFPM1ENSG00000179588.9Distal intron
chr9114,284,744114,284,762+8.4733.525COL27A1ENSG00000196739.15CDS
chr10126,906,270126,906,363+3.7794.354DOCK1ENSG00000150760.13Distal intron
chr2145,427,64345,427,710+5.3453.215COL18A1ENSG00000182871.16Distal intron
chr2062,049,60662,049,646-3.0353.886TAF4ENSG00000130699.20Distal intron
chr1528,113,57228,113,616-5.5853.237HERC2ENSG00000128731.18CDS
chr218,401,8128,401,819+183.0858.330ENSG00000280441ENSG00000280441.3ncRNA
chr218,401,7958,401,812+180.4038.314ENSG00000280441ENSG00000280441.3ncRNA
chr17245,952246,057-6.8453.059RPH3ALENSG00000181031.16Distal intron
chr1561,920,27261,920,328-3.2843.845VPS13CENSG00000129003.19CDS
chr1935,737,12035,737,160+3.0354.151KMT2BENSG00000272333.8CDS
chr792,045,03292,045,128+3.6213.510AKAP9ENSG00000127914.19CDS
chr1767,944,18267,944,252+4.8063.529BPTFENSG00000171634.19CDS
chr1256,158,36956,158,404+4.2714.259MYL6ENSG00000092841.19CDS
chr3195,109,165195,109,297-5.8354.526XXYLT1ENSG00000173950.16Distal intron
chr2235,342,59235,342,633+3.8094.006TOM1ENSG00000100284.22Distal intron
chr89,772,0859,772,180+8.5585.652TNKSENSG00000173273.16Proximal intron
chr218,401,8198,401,844+80.2138.295ENSG00000280441ENSG00000280441.3ncRNA
chr1019,567,65419,567,703+5.1874.111MALRD1ENSG00000204740.11CDS
chr2248,586,78048,586,933+9.2764.340TAFA5ENSG00000219438.9Distal intron
chr7157,776,023157,776,101-3.6214.642PTPRN2ENSG00000155093.19Distal intron
chr117,669,02117,669,075+4.0793.386ARHGEF10LENSG00000074964.17Distal intron
chr17244,529244,633-4.0793.658RPH3ALENSG00000181031.16Distal intron
chr2127,505,393127,505,442-3.0353.801IWS1ENSG00000163166.15CDS
chr1249,046,06349,046,096-3.1113.195KMT2DENSG00000167548.18CDS
chr1615,114,54615,114,571-3.2623.984NPIPP1|PKD1P6-NPIPP1ENSG00000270580.5||ENSG00000188599.17ncRNA
chr4122,313,648122,313,685+3.1113.041KIAA1109ENSG00000138688.17CDS
chr197,211,3647,211,489-3.6213.187INSRENSG00000171105.14Distal intron
chr2062,054,59062,054,633-3.1113.074TAF4ENSG00000130699.20Distal intron
chr1716,061,66016,061,717-4.1383.562NCOR1ENSG00000141027.22CDS
chr7157,138,956157,139,077+4.9903.041UBE3CENSG00000009335.185' UTR
chr1761,968,13261,968,191-4.1383.450MED13ENSG00000108510.10CDS
chr1525,081,08825,081,193+7.4543.321SNHG14ENSG00000224078.15ncRNA
chr9133,876,993133,877,021-3.5323.971VAV2ENSG00000160293.17Distal intron
chr1563,640,34463,640,397-3.2843.930HERC1ENSG00000103657.14CDS
chr1495,103,58795,103,719-5.5153.210DICER1ENSG00000100697.17CDS
chr656,468,98056,468,999-3.5354.063DSTENSG00000151914.22CDS
chr1525,076,85425,076,907+8.7844.308SNHG14ENSG00000224078.15ncRNA
chr1525,076,90725,076,967+5.8263.477SNHG14ENSG00000224078.15ncRNA
chr232,443,56732,443,588+4.9144.519BIRC6ENSG00000115760.16CDS
chr191,411,2341,411,264+6.0273.336DAZAP1ENSG00000071626.17Distal intron
chr1923,322,21523,322,291-5.4704.940ZNF91ENSG00000167232.14ncRNA
chr627,132,69127,132,750-3.4553.163H2BC11ENSG00000124635.9CDS
chr194,035,3784,035,455+8.0623.337PIAS4ENSG00000105229.7Distal intron
chr7158,361,616158,361,662-6.1173.286PTPRN2ENSG00000155093.19Distal intron
chr7107,935,458107,935,477-3.1113.074LAMB1ENSG00000091136.15CDS
chr17258,519258,632-4.1383.426RPH3ALENSG00000181031.16Distal intron
chr7158,359,954158,360,041-14.4695.332PTPRN2ENSG00000155093.19Distal intron
chr17315,634315,692-3.1114.298RPH3ALENSG00000181031.16Distal intron
chr484,787,61284,787,713-6.6963.061WDFY3ENSG00000163625.16CDS
chr1276,559,53976,559,706-6.0653.547OSBPL8ENSG00000091039.175' UTR
chr5140,528,572140,528,634+5.2883.730ANKHD1|ANKHD1-EIF4EBP3ENSG00000254996.5||ENSG00000131503.21CDS
chr194,035,1694,035,231+7.2824.086PIAS4ENSG00000105229.7Distal intron
chr194,035,2314,035,272+4.8063.582PIAS4ENSG00000105229.7Distal intron
chr2143,952,06243,952,201+3.3653.116AGPAT3ENSG00000160216.21Distal intron
chr1615,125,70315,125,742-3.3493.401PKD1P6|PKD1P6-NPIPP1ENSG00000270580.5||ENSG00000250251.6ncRNA
chr12112,319,336112,319,402-3.3653.208HECTD4ENSG00000173064.14CDS
chr2219,431,49319,431,578-3.5923.434HIRAENSG00000100084.145' UTR
chr191,410,4431,410,495+8.2753.082DAZAP1ENSG00000071626.17Distal intron
chr2152,628,299152,628,391+7.6573.336FMNL2ENSG00000157827.20CDS
chr17315,479315,542-4.3605.329RPH3ALENSG00000181031.16Distal intron
chr2248,581,84748,581,955+5.3115.042TAFA5ENSG00000219438.9Distal intron
chr6170,400,303170,400,363+4.5164.408FAM120BENSG00000112584.14Distal intron
chr126,606,4006,606,443-4.6203.312CHD4ENSG00000111642.165' UTR
chr1094,545,81194,545,924+4.3793.391HELLSENSG00000119969.16CDS
chr228,752,02828,752,055+12.2633.695PPP1CBENSG00000213639.115' UTR
chr514,336,64314,336,712+5.9843.809TRIOENSG00000038382.22CDS
chr117,670,68117,670,709+3.2623.798ARHGEF10LENSG00000074964.17Distal intron
chr10100,999,211100,999,293+4.9233.570LZTS2ENSG00000107816.17Proximal intron
chr162,090,4382,090,490-8.6685.141PKD1ENSG00000008710.20CDS
chr119,150,69619,150,720-4.5063.251UBR4ENSG00000127481.15CDS
chr2151,433,199151,433,229+3.2623.839RIF1ENSG00000080345.18CDS
chr2031,782,24831,782,285+5.3453.451TPX2ENSG00000088325.16CDS
chr4776,781776,855-6.1173.091PCGF3-AS1ENSG00000249592.7ncRNA
chr12122,582,723122,582,775+6.0284.576KNTC1ENSG00000184445.12CDS
chr1681,489,30781,489,382+9.2043.324CMIPENSG00000153815.18Distal intron
chr9133,849,444133,849,505-3.8793.284VAV2ENSG00000160293.17Distal intron
chr139,452,27139,452,348+6.2843.412MACF1ENSG00000127603.32CDS
chr1732,931,32532,931,407+3.7183.181TMEM98ENSG00000006042.125' UTR
chr12,290,1102,290,191+3.9423.151SKIENSG00000157933.10Distal intron
chr143,437,25043,437,320+3.8094.137SZT2ENSG00000198198.17CDS
chr4150,915,606150,915,682-8.9623.428LRBAENSG00000198589.15CDS
chr1528,130,50128,130,569-5.7703.234HERC2ENSG00000128731.18CDS
chr989,311,26489,311,317+5.3373.129CKS2ENSG00000123975.5CDS
chr76,706,8316,706,900-3.0353.925ZNF12ENSG00000164631.195' UTR
chr1772,554,30572,554,356-3.8094.006LINC00511ENSG00000227036.10ncRNA
chr1616,328,15716,328,200+4.7653.398PKD1P1|ENSG00000183889ENSG00000244257.5||ENSG00000183889.12ncRNA
chr1813,052,91713,052,947+3.8363.259CEP192ENSG00000101639.19CDS
chrX108,439,974108,440,044+5.2613.163COL4A5ENSG00000188153.145' UTR
chr6170,400,050170,400,115+4.2563.486FAM120BENSG00000112584.14Distal intron
chr1377,168,57177,168,628-3.7794.010MYCBP2ENSG00000005810.20CDS
chr12123,509,935123,510,045-25.0985.693RILPL1ENSG00000188026.13Distal intron
chr12123,510,264123,510,340-24.7085.516RILPL1ENSG00000188026.13Distal intron
chr12123,510,216123,510,264-15.2174.919RILPL1ENSG00000188026.13Distal intron
chr12123,510,065123,510,216-29.3954.662RILPL1ENSG00000188026.13Distal intron
chr2239,329,090239,329,133-3.8793.366HDAC4ENSG00000068024.18Distal intron
chr1767,893,68767,893,725+4.6603.516BPTFENSG00000171634.19CDS
chr3136,196,227136,196,318-3.0353.801MSL2ENSG00000174579.55' UTR
chr232,617,73032,617,821+8.5963.353BIRC6ENSG00000115760.16CDS
chr1455,684,46355,684,558+3.7633.207KTN1ENSG00000126777.183' UTR
chr12,291,0622,291,108+3.0354.093SKIENSG00000157933.10Distal intron
chr1070,161,87270,161,933-4.2714.259SAR1AENSG00000079332.15CDS
chr1777,215,22577,215,343+9.4213.578SEC14L1ENSG00000129657.163' UTR
chr1618,829,92718,829,941-4.8063.556SMG1ENSG00000157106.18CDS
chr6166,342,427166,342,480-7.0163.538SFT2D1ENSG00000198818.10CDS
chr2062,047,95662,048,026-4.1383.541TAF4ENSG00000130699.20Distal intron
chr1933,458,92333,458,993-3.7794.086PEPDENSG00000124299.16Distal intron
chr2200,813,206200,813,273+4.3793.324BZW1ENSG00000082153.18CDS
chr14102,027,657102,027,671+3.0354.031DYNC1H1ENSG00000197102.14CDS
chr162,091,8862,091,904-3.5324.010PKD1ENSG00000008710.20CDS
chr9134,383,048134,383,117+3.8094.106RXRAENSG00000186350.12Distal intron
chr1761,395,76561,395,819-4.0254.339ENSG00000267131|TBX2-AS1ENSG00000267131.1||ENSG00000267280.6ncRNA
chr348,414,05348,414,068-8.2353.674PLXNB1ENSG00000164050.13CDS
chr1737,263,70937,263,761-4.0793.570ACACAENSG00000278540.5CDS
chr139,432,58139,432,651+7.7874.047MACF1ENSG00000127603.32CDS
chr119,198,54219,198,582-7.3873.000UBR4ENSG00000127481.15CDS
chr349,721,40549,721,463+4.7804.471RNF123ENSG00000164068.163' UTR
chr710,983,06210,983,149+4.3993.553PHF14ENSG00000106443.17CDS
chr1226,561,76126,561,766-4.7563.388ITPR2ENSG00000123104.12CDS
chr1780,373,03380,373,166+6.1123.047RNF213ENSG00000173821.20CDS
chr1019,280,12719,280,170+3.7633.010MALRD1ENSG00000204740.11CDS
chr1528,141,73028,141,769-4.8063.500HERC2ENSG00000128731.18CDS
chr19879,211879,275-3.0383.036MED16ENSG00000175221.16Distal intron
chr4150,916,400150,916,510-8.3703.654LRBAENSG00000198589.15CDS
chr183,247,8213,247,882+7.7125.070MYL12AENSG00000101608.135' UTR
chr2145,436,20845,436,266+6.0964.835COL18A1ENSG00000182871.16Distal intron
chr155,129,54055,129,573-4.3993.408USP24ENSG00000162402.14CDS
chr1528,190,97828,191,028-4.7804.444HERC2ENSG00000128731.18CDS
chr2118,006,722118,006,769-3.5354.063CCDC93ENSG00000125633.11CDS
chr261,211,77161,211,784-4.7804.290USP34ENSG00000115464.15CDS
chr12,229,9852,230,010+4.1383.347SKIENSG00000157933.10Proximal intron
chr247,410,13147,410,246+4.0093.120MSH2ENSG00000095002.15CDS
chr119,095,54419,095,575-4.8893.241UBR4ENSG00000127481.15CDS
chr1154,602,545154,602,596-3.1063.192ADARENSG00000160710.18CDS
chr1349,114,66449,114,732+3.3493.290FNDC3AENSG00000102531.16CDS
chr4121,696,579121,696,625-7.8903.662ANXA5ENSG00000164111.15CDS
chr689,793,90689,793,953-4.9233.678MDN1ENSG00000112159.13CDS
chr1742,487,24942,487,368+4.6603.466ATP6V0A1ENSG00000033627.17CDS
chr119,161,59519,161,648-9.9614.381UBR4ENSG00000127481.15CDS
chr119,161,58819,161,595-4.2563.486UBR4ENSG00000127481.15CDS
chr119,141,40519,141,493-9.8093.229UBR4ENSG00000127481.15CDS
chr1685,636,70585,636,801+4.7653.036GSE1ENSG00000131149.19Distal intron
chrX123,624,058123,624,104-3.8793.484THOC2ENSG00000125676.20CDS
chr631,887,59931,887,655-3.3493.227EHMT2ENSG00000204371.12CDS
chr1728,681,88028,681,954+3.7633.192SUPT6HENSG00000109111.15CDS
chr993,209,62293,209,705+3.5353.962WNK2ENSG00000165238.17Distal intron
chr7158,424,716158,424,778-4.6603.913PTPRN2ENSG00000155093.19Distal intron
chr2145,431,74945,431,794+3.3493.290COL18A1ENSG00000182871.16Distal intron
chr1616,328,65016,328,687+3.4943.345ENSG00000183889|PKD1P1ENSG00000244257.5||ENSG00000183889.12ncRNA
chr17317,110317,184-3.5354.462RPH3ALENSG00000181031.16Distal intron
chr3129,569,847129,569,877-3.1113.106PLXND1ENSG00000004399.13CDS
chr1437,594,90737,594,988-3.0353.925FOXA1ENSG00000129514.8CDS
chr313,388,40313,388,435-4.3223.353NUP210ENSG00000132182.13CDS
chr5140,401,892140,401,944+4.3223.445ANKHD1-EIF4EBP3|ANKHD1ENSG00000254996.5||ENSG00000131503.215' UTR
chr17246,402246,446-3.8793.254RPH3ALENSG00000181031.16Distal intron
chr6144,461,196144,461,228+6.4403.681UTRNENSG00000152818.19CDS
chr1178,079,71778,079,832-12.1283.282NDUFC2|NDUFC2-KCTD14ENSG00000259112.2||ENSG00000151366.13CDS
chr12,298,0462,298,075+3.0353.997SKIENSG00000157933.10Distal intron
chr9134,363,416134,363,462+3.1063.312RXRAENSG00000186350.12Distal intron
chr139,430,70439,430,761+5.0083.415MACF1ENSG00000127603.32CDS
chr3197,517,105197,517,180-3.3653.863BDH1ENSG00000161267.12Distal intron
chr2025,491,37525,491,417-4.2563.132NINLENSG00000101004.15CDS
chr1525,087,46825,087,515+4.0793.678SNHG14ENSG00000224078.15ncRNA
chr1525,087,57625,087,599+3.3493.193SNHG14ENSG00000224078.15ncRNA
chr1525,087,51525,087,576+4.8373.031SNHG14ENSG00000224078.15ncRNA
chr12112,217,033112,217,059-4.0254.047HECTD4ENSG00000173064.14CDS
chr1164,193,07464,193,104+3.5923.292STIP1ENSG00000168439.17CDS
chr1777,436,53577,436,576+4.6203.123SEPTIN9ENSG00000184640.20Distal intron
chr899,156,62899,156,711+4.6203.123VPS13BENSG00000132549.20CDS
chr12123,513,577123,513,733-20.9124.239RILPL1ENSG00000188026.13Distal intron
chr2145,410,76345,410,817+4.0254.462COL18A1ENSG00000182871.16Distal intron
chr11119,334,554119,334,659+6.6963.179RNF26ENSG00000173456.55' UTR
chr3184,335,297184,335,315+5.7673.682EIF4G1ENSG00000114867.223' UTR
chrX1,407,4971,407,611+4.9144.874ASMTL-AS1ENSG00000236017.8ncRNA
chr247,416,30347,416,344+3.2844.106MSH2ENSG00000095002.15CDS
chr2248,581,67548,581,736+4.0254.224TAFA5ENSG00000219438.9Distal intron
chr1670,568,28770,568,315+3.0353.801SF3B3ENSG00000189091.13CDS
chr155,138,60755,138,657-6.1173.181USP24ENSG00000162402.14CDS
chr2137,140,58737,140,632+4.0093.021TTC3ENSG00000182670.14CDS
chr2145,434,84645,434,903+5.3114.673COL18A1ENSG00000182871.16Distal intron
chr13112,728,354112,728,404+5.5283.632ATP11AENSG00000068650.19Distal intron
chr1923,324,40623,324,513-17.9316.039ZNF91ENSG00000167232.14ncRNA
chr1452,695,76152,695,857-6.8683.167ERO1AENSG00000197930.13ncRNA
chr1568,819,26968,819,352-7.8795.082ANP32AENSG00000140350.15Distal intron
chr899,136,66499,136,754+8.1073.913VPS13BENSG00000132549.20CDS
chr274,368,10774,368,160-3.0353.754DCTN1ENSG00000204843.13CDS
chr899,156,71199,156,741+3.2843.845VPS13BENSG00000132549.20CDS
chr1212,181,10812,181,189-4.3223.353LRP6ENSG00000070018.9CDS
chr1689,297,58989,297,619-3.3653.178ANKRD11ENSG00000167522.17Distal intron
chr2032,462,06732,462,151-3.4943.052NOL4LENSG00000197183.15Distal intron
chr1618,385,39718,385,442-4.3223.526PKD1P5ENSG00000254681.6ncRNA
chr117,619,34017,619,383+5.5153.341ARHGEF10LENSG00000074964.17CDS
chr1911,442,40111,442,453+3.8793.254PRKCSHENSG00000130175.10CDS
chr1910,353,93010,353,992-4.5643.444TYK2ENSG00000105397.155' splice site
chr1737,270,75037,270,782-3.8363.627ACACAENSG00000278540.5CDS
chr2247,157,43147,157,503+4.3223.445TBC1D22AENSG00000054611.14Distal intron
chr1257,211,56457,211,588+7.2523.641LRP1ENSG00000123384.14CDS
chr19893,560893,590+44.2544.847RNU6-9ENSG00000207507.1ncRNA
chr478,057,90478,057,948+3.8653.195FRAS1ENSG00000138759.205' UTR
chr1618,811,95218,811,979-3.3653.208SMG1ENSG00000157106.18CDS
chr7158,359,120158,359,166-5.0083.754PTPRN2ENSG00000155093.19Distal intron
chr1761,396,83361,396,955-4.3913.523ENSG00000267131|TBX2-AS1ENSG00000267131.1||ENSG00000267280.6ncRNA
chr514,387,45114,387,508+3.8094.298TRIOENSG00000038382.22CDS
chr1688,501,81088,501,892+4.9233.497ZFPM1ENSG00000179588.9Distal intron
chr191,171,6731,171,734-3.5923.353SBNO2ENSG00000064932.16Distal intron
chr9137,716,621137,716,714+5.7673.778EHMT1ENSG00000181090.21CDS
chr9134,357,357134,357,409+3.1063.254RXRAENSG00000186350.12Distal intron
chrX1,403,2041,403,254+4.3604.302ASMTL-AS1ENSG00000236017.8ncRNA
chr12120,153,892120,153,909-5.3114.580GCN1ENSG00000089154.11CDS
chr261,348,84161,348,886-4.4083.095USP34ENSG00000115464.15CDS
chr483,012,80483,012,895-3.1113.298LIN54ENSG00000189308.115' UTR
chr2062,335,02262,335,028-5.6653.067LAMA5ENSG00000130702.15CDS
chr632,190,02932,190,077-4.5144.259PBX2ENSG00000204304.125' UTR
chr14102,005,063102,005,114+4.5643.501DYNC1H1ENSG00000197102.14CDS
chr218,401,7828,401,784+32.7517.263ENSG00000280441ENSG00000280441.3ncRNA
chr218,401,7808,401,782+31.7437.227ENSG00000280441ENSG00000280441.3ncRNA
chr12101,383,169101,383,276+3.8094.167UTP20ENSG00000120800.5CDS
chr295,117,88795,117,942-3.5353.997MRPS5ENSG00000144029.14CDS
chr2063,693,29863,693,407+9.7804.663RTEL1ENSG00000258366.125' splice site
chr10112,183,593112,183,678-7.7874.123GPAMENSG00000119927.145' UTR
chr263,594,48563,594,539+6.5263.078MDH1ENSG00000014641.21CDS
chr1616,374,36216,374,427+7.0274.417PKD1P2ENSG00000227827.3ncRNA
chr1019,595,19119,595,211+3.1113.622MALRD1ENSG00000204740.11CDS
chr6170,398,001170,398,050+6.6125.024FAM120BENSG00000112584.14Distal intron
chr1618,836,50318,836,533-5.6233.063SMG1ENSG00000157106.18CDS
chr2062,314,30462,314,334-9.9503.598LAMA5ENSG00000130702.15CDS
chr1685,624,98185,625,040+3.5923.508GSE1ENSG00000131149.19Distal intron
chr1685,638,30785,638,338+3.0354.178GSE1ENSG00000131149.19Distal intron
chr2035,502,83235,502,872+3.2623.984CEP250ENSG00000126001.16CDS
chr2241,157,25241,157,316+4.3793.049EP300ENSG00000100393.14CDS
chr162,089,3962,089,467-9.8073.386PKD1ENSG00000008710.203' UTR
chr162,089,3442,089,396-4.8623.354PKD1ENSG00000008710.203' UTR
chr142,766,92142,767,017-5.2883.909P3H1ENSG00000117385.16CDS
chr1528,124,03628,124,060-4.5144.440HERC2ENSG00000128731.18CDS
chr1618,837,25118,837,317-8.3943.217SMG1ENSG00000157106.18CDS
chr1923,322,34023,322,486-5.4705.205ZNF91ENSG00000167232.14ncRNA
chr12115,968,951115,969,064-5.1873.600MED13LENSG00000123066.9CDS
chr2128,091,326128,091,386+3.5923.655UGGT1ENSG00000136731.13CDS
chr1262,546,99262,547,071+3.3653.263MON2ENSG00000061987.16CDS
chr484,780,17384,780,280-7.0273.970WDFY3ENSG00000163625.16CDS
chr1917,405,51617,405,572-4.0254.047BST2ENSG00000130303.14CDS
chr1618,829,62318,829,701-9.6944.006SMG1ENSG00000157106.18CDS
chr2145,436,49245,436,562+4.5164.574COL18A1ENSG00000182871.16Distal intron
chr577,691,33377,691,412-3.5354.031TBCAENSG00000171530.153' UTR
chr1379,355,22379,355,274-4.0844.082RBM26ENSG00000139746.16CDS
chr1618,819,62518,819,653-3.3493.158SMG1ENSG00000157106.18CDS
chr9134,348,330134,348,384+4.9144.347RXRAENSG00000186350.12Distal intron
chr1165,616,82265,616,883+3.0473.010PCNX3ENSG00000197136.5CDS
chr1019,347,77019,347,798+6.8013.489MALRD1ENSG00000204740.11CDS
chr3197,517,016197,517,105-5.5153.866BDH1ENSG00000161267.12Distal intron
chr1750,719,80950,719,830+5.7184.095LUC7L3ENSG00000108848.16CDS
chr1750,719,73750,719,809+15.9503.496LUC7L3ENSG00000108848.16CDS
chr12122,511,108122,511,188-3.2623.798RSRC2ENSG00000111011.18CDS
chr1173,964,085173,964,178-3.2844.041RC3H1ENSG00000135870.12CDS
chr1019,387,71619,387,762+4.9233.790MALRD1ENSG00000204740.11CDS
chr1621,843,48021,843,578-5.0473.582NPIPB4ENSG00000185864.18CDS
chr1782,007,48882,007,549+11.4033.149ASPSCR1ENSG00000169696.16Distal intron
chr1618,809,52718,809,606-7.1203.275SMG1ENSG00000157106.18CDS
chr656,555,65256,555,758-4.1383.693DSTENSG00000151914.22CDS
chr12,270,2542,270,310+4.8063.678SKIENSG00000157933.10Distal intron
chr1164,186,21364,186,273+7.7874.175STIP1ENSG00000168439.17CDS
chr2145,437,00445,437,071+4.5643.413COL18A1ENSG00000182871.16Distal intron
chr341,224,03541,224,081+6.8453.086CTNNB1ENSG00000168036.18CDS
chr232,611,54932,611,576+5.7703.383BIRC6ENSG00000115760.16CDS
chr1249,027,81649,027,864-5.7673.755KMT2DENSG00000167548.18CDS
chr162,093,8232,093,961-9.4213.567PKD1ENSG00000008710.20CDS
chrX133,817,056133,817,123-7.0483.438GPC3ENSG00000147257.16Distal intron
chr12123,514,038123,514,063-5.7494.497RILPL1ENSG00000188026.13Distal intron
chr162,105,8632,105,922-8.2603.370PKD1ENSG00000008710.20CDS
chr1525,085,18925,085,215+4.0254.391SNHG14ENSG00000224078.15ncRNA
chr1779,989,74479,989,782-3.0354.093TBC1D16ENSG00000167291.16Distal intron
chr139,442,71739,442,775+6.5204.091MACF1ENSG00000127603.32CDS
chr1728,897,52428,897,661-3.0473.142FLOT2ENSG00000132589.16CDS
chr2235,543,336235,543,414+5.4523.736AGAP1ENSG00000157985.20Distal intron
chr9134,365,688134,365,746+5.4704.492RXRAENSG00000186350.12Distal intron
chr211,615,09811,615,117+6.5203.878GREB1ENSG00000196208.14CDS
chr17314,579314,628-3.3653.582RPH3ALENSG00000181031.16Distal intron
chr4150,844,102150,844,123-3.5324.047LRBAENSG00000198589.15CDS
chr1618,386,10618,386,173-6.6124.921PKD1P5ENSG00000254681.6ncRNA
chr5175,492,107175,492,182+3.5923.353SFXN1ENSG00000164466.13CDS
chr1021,534,64421,534,696+9.5333.095MLLT10ENSG00000078403.17CDS
chr1528,176,54128,176,594-4.1383.450HERC2ENSG00000128731.18CDS
chr238,711,94938,712,064+7.0613.526GALMENSG00000143891.17Distal intron
chr1777,404,70277,404,751+5.1033.145SEPTIN9ENSG00000184640.20Distal intron
chr656,485,35356,485,430-5.0083.198DSTENSG00000151914.22CDS
chr1942,254,41242,254,461-5.8263.324ERFENSG00000105722.105' splice site
chr689,730,72589,730,737-3.6213.275MDN1ENSG00000112159.13CDS
chr2145,430,68745,430,793+4.5033.007COL18A1ENSG00000182871.16Distal intron
chr938,545,64338,545,726-3.1113.222ANKRD18AENSG00000180071.21ncRNA
chr218,401,7898,401,795+150.3168.025ENSG00000280441ENSG00000280441.3ncRNA
chr218,401,7848,401,789+93.2107.395ENSG00000280441ENSG00000280441.3ncRNA
chr64,047,1884,047,249+4.1693.092PRPF4BENSG00000112739.17CDS
chr2142,849,59842,849,655-5.9973.908WDR4ENSG00000160193.123' UTR
chr641,747,27341,747,375-5.3114.812PGCENSG00000096088.16CDS
chr1685,640,45385,640,501+4.5144.324GSE1ENSG00000131149.19Distal intron
chr1627,501,20227,501,263-3.1063.224GTF3C1ENSG00000077235.18CDS
chr2145,425,28545,425,357+6.7793.892COL18A1ENSG00000182871.16Distal intron
chr191,944,6751,944,748+3.6213.402CSNK1G2ENSG00000133275.16Distal intron
chr17244,780244,891-5.2613.184RPH3ALENSG00000181031.16Distal intron
chr4151,014,829151,014,862-5.1873.600LRBAENSG00000198589.155' UTR
chr41,245,7601,245,878-10.3553.366CTBP1ENSG00000159692.17Proximal intron
chr1112,688,932112,688,977+4.5164.531MOV10ENSG00000155363.19CDS
chr74,706,3884,706,515+5.9843.790FOXK1ENSG00000164916.11Distal intron
chr74,696,4514,696,524+3.0353.886FOXK1ENSG00000164916.11Distal intron
chr12,267,6802,267,707+4.6603.440SKIENSG00000157933.10Distal intron
chr2235,557,001235,557,048+5.5744.701AGAP1ENSG00000157985.20Distal intron
chr1424,210,38224,210,426-3.5353.962CHMP4A|ENSG00000254692ENSG00000254505.11||ENSG00000254692.1CDS
chr7158,358,851158,358,900-3.2624.516PTPRN2ENSG00000155093.19Distal intron
chr2248,588,58748,588,650+3.5353.925TAFA5ENSG00000219438.9Distal intron
chr232,599,81132,599,855+6.6173.193BIRC6ENSG00000115760.16CDS
chr350,118,59750,118,698+6.9853.058RBM5ENSG00000003756.173' UTR
chr171,651,1101,651,146-4.3223.353PRPF8ENSG00000174231.17CDS
chr12131,764,550131,764,662+4.6203.123SFSWAPENSG00000061936.10CDS
chr1234,430,170234,430,272-7.5833.809TARBP1ENSG00000059588.10CDS
chr1248,957,34348,957,452-3.3493.227ARF3|ENSG00000272822ENSG00000134287.10||ENSG00000272822.25' UTR
chr1685,618,40685,618,497+5.8893.171GSE1ENSG00000131149.19Distal intron
chr7157,775,860157,775,941-3.8094.735PTPRN2ENSG00000155093.19Distal intron
chr2235,342,37335,342,411+3.2623.798TOM1ENSG00000100284.22Distal intron
chr2235,342,42635,342,541+8.3943.363TOM1ENSG00000100284.22Distal intron
chr1528,111,35928,111,403-3.1113.222HERC2ENSG00000128731.183' UTR
chr8140,879,499140,879,559-3.5323.886PTK2ENSG00000169398.20CDS
chr12123,514,123123,514,174-10.5245.291RILPL1ENSG00000188026.13Distal intron
chr162,097,7272,097,738-3.3653.236PKD1ENSG00000008710.20CDS
chr3184,327,928184,327,982+5.5853.582EIF4G1ENSG00000114867.22CDS
chr3184,327,875184,327,928+5.8483.131EIF4G1ENSG00000114867.22CDS
chr1728,623,89028,623,967-5.2883.634KIAA0100ENSG00000007202.15CDS
chr17920,421920,526-3.8363.355NXNENSG00000167693.17Distal intron
chr126,582,2126,582,250-5.9973.823CHD4ENSG00000111642.16CDS
chr1455,637,19655,637,265+4.5063.102KTN1ENSG00000126777.18CDS
chr1730,624,23930,624,306+3.3653.339ENSG00000214719ENSG00000214719.13ncRNA
chr89,770,9619,771,067+10.3255.342TNKSENSG00000173273.16Distal intron
chr89,770,7429,770,832+4.9145.092TNKSENSG00000173273.16Proximal intron
chr89,770,8329,770,885+3.0383.217TNKSENSG00000173273.16Distal intron
chr2221,867,49821,867,593-4.6703.165MAPK1ENSG00000100030.155' UTR
chr794,656,55394,656,581+32.4793.110PEG10ENSG00000242265.65' UTR
chr232,524,99732,525,019+7.0574.217BIRC6ENSG00000115760.16CDS
chr9134,364,270134,364,333+4.5063.123RXRAENSG00000186350.12Distal intron
chr1623,090,70123,090,766-3.3493.082USP31ENSG00000103404.15CDS
chr348,411,99048,412,009-8.2603.401PLXNB1ENSG00000164050.13CDS
chr9133,882,977133,883,018-3.8793.391VAV2ENSG00000160293.17Distal intron
chr1767,854,00867,854,056+3.6213.187BPTFENSG00000171634.19CDS
chr4719,689719,768+4.0844.082PCGF3ENSG00000185619.19Distal intron
chr2056,473,30156,473,389+3.2844.006RTF2ENSG00000022277.13CDS
chr218,218,7408,218,815+72.1243.547ENSG00000278996ENSG00000278996.1ncRNA
chr194,034,7874,034,853+6.7713.886PIAS4ENSG00000105229.7Distal intron
chr9110,256,412110,256,509-14.7933.293TXNENSG00000136810.13CDS
chr1174,999,991175,000,064+3.2844.167CACYBPENSG00000116161.185' UTR
chr2239,275,681239,275,795-3.0473.223HDAC4ENSG00000068024.18Distal intron
chr1749,791,92149,792,021+3.0353.886KAT7ENSG00000136504.13CDS
chr6160,068,249160,068,288+6.3544.683IGF2RENSG00000197081.16CDS
chr9134,377,237134,377,305+3.8363.705RXRAENSG00000186350.12Distal intron
chr191,943,6401,943,695+4.0793.415CSNK1G2ENSG00000133275.16Distal intron
chr11639,303639,349+5.1924.484DRD4ENSG00000069696.73' splice site
chr9104,793,171104,793,191-3.7633.107ABCA1ENSG00000165029.17CDS
chr2032,472,77332,472,827-4.8623.354NOL4LENSG00000197183.15Distal intron
chr632,978,22532,978,270+10.7223.684BRD2ENSG00000204256.14CDS
chr499,950,16699,950,258-8.6143.637H2AZ1ENSG00000164032.12CDS
chr689,743,69489,743,713-4.9233.570MDN1ENSG00000112159.13CDS
chr1172,697,32672,697,370-4.9233.570ARAP1ENSG00000186635.15CDS
chr2119,368,186119,368,192+7.0623.123DBIENSG00000155368.18CDS
chr119,192,19619,192,216-5.0083.158UBR4ENSG00000127481.15CDS
chr1688,731,87788,731,909-4.3223.728PIEZO1ENSG00000103335.22CDS
chr1757,402,11857,402,224+4.0793.807MSI2ENSG00000153944.12Distal intron
chr119,177,68619,177,740-9.4683.086UBR4ENSG00000127481.15CDS
chr2247,006,13247,006,240+4.5144.292TBC1D22AENSG00000054611.14Distal intron
chr1819,865819,959-4.3604.302ENSG00000230021ENSG00000230021.10ncRNA
chr1528,141,48928,141,528-4.3604.217HERC2ENSG00000128731.18CDS
chr1528,141,52828,141,597-6.2843.412HERC2ENSG00000128731.18CDS
chr11,023,3041,023,352+4.0254.086AGRNENSG00000188157.15Distal intron
chr1563,156,51163,156,523-5.0083.093RPS27LENSG00000185088.14CDS
chr121,848,89621,848,914-3.8793.254HSPG2ENSG00000142798.20CDS
chr1528,135,53528,135,593-6.0284.552HERC2ENSG00000128731.18CDS
chr9133,931,957133,932,016-4.5144.385VAV2ENSG00000160293.17Distal intron
chr5103,120,331103,120,476+3.5923.460PPIP5K2ENSG00000145725.21CDS
chr754,759,15654,759,212-8.5963.118SEC61GENSG00000132432.145' UTR
chr1262,466,86662,466,938+3.3653.178MON2ENSG00000061987.165' UTR
chr473,258,48273,258,515-3.5923.323ANKRD17ENSG00000132466.20CDS
chr1528,132,72228,132,808-5.3773.278HERC2ENSG00000128731.18CDS
chr2248,582,09148,582,149+3.0354.278TAFA5ENSG00000219438.9Distal intron
chr17274,371274,449-3.5354.063RPH3ALENSG00000181031.16Distal intron
chr14104,784,609104,784,659-4.3604.187AKT1ENSG00000142208.18Distal intron
chrX1,407,9151,408,025+8.1404.236ASMTL-AS1ENSG00000236017.8ncRNA
chr119,164,37319,164,440-9.4683.093UBR4ENSG00000127481.15CDS
chr1618,842,41418,842,449-3.8793.284SMG1ENSG00000157106.18CDS
chr1528,130,18528,130,263-5.0083.307HERC2ENSG00000128731.18CDS
chr191,416,7831,416,845+4.5063.082DAZAP1ENSG00000071626.17Distal intron
chr28,778,6408,778,703-3.8793.339KIDINS220ENSG00000134313.17CDS
chr1946,788,07246,788,158-7.7663.224SLC1A5ENSG00000105281.125' UTR
chr14104,781,315104,781,372-3.2843.845AKT1ENSG00000142208.18Distal intron
chr2149,587,086149,587,139-3.2844.106MMADHCENSG00000168288.13CDS
chr5140,528,989140,529,050+6.0063.754ANKHD1|ANKHD1-EIF4EBP3ENSG00000131503.21||ENSG00000254996.5CDS
chr1615,118,92515,118,951-4.3604.354NPIPP1|PKD1P6-NPIPP1ENSG00000270580.5||ENSG00000188599.17ncRNA
chr1761,961,72161,961,772-3.5923.155MED13ENSG00000108510.10CDS
chr847,857,15547,857,188-5.3453.417PRKDCENSG00000253729.9CDS
chr1439,176,52639,176,532+10.5223.617PNNENSG00000100941.9CDS
chr1439,176,53239,176,546+13.4113.215PNNENSG00000100941.9CDS
chr16543,809543,865+3.5923.655hsa-mir-3176MI0014210miRNA
chr9114,235,638114,235,652+13.4493.437COL27A1ENSG00000196739.15CDS
chr2137,135,39937,135,485+5.8693.130TTC3ENSG00000182670.14CDS
chr274,867,70974,867,754+5.4523.628HK2ENSG00000159399.10CDS
chr12102,912,820102,912,898-3.8653.171PAHENSG00000171759.10CDS
chr9133,907,811133,907,850-3.1063.006VAV2ENSG00000160293.17Distal intron
chr6144,488,739144,488,774+8.2333.020UTRNENSG00000152818.19CDS
chr773,447,26173,447,286-3.1113.106BAZ1BENSG00000009954.11CDS
chr348,406,88448,406,895-6.0653.547PLXNB1ENSG00000164050.13CDS
chr1528,191,14028,191,187-4.1383.374HERC2ENSG00000128731.18CDS
chr17245,548245,675-5.4343.127RPH3ALENSG00000181031.16Distal intron
chr1091,980,51091,980,548+4.3993.484BTAF1ENSG00000095564.15CDS
chr899,170,13499,170,163+3.5923.292VPS13BENSG00000132549.20CDS
chr2145,436,12045,436,179+3.5324.263COL18A1ENSG00000182871.16Distal intron
chr1630,709,99330,710,056+6.0964.607SRCAPENSG00000080603.17CDS
chr17244,676244,739-4.6364.312RPH3ALENSG00000181031.16Distal intron
chr191,408,5641,408,609+5.8263.510DAZAP1ENSG00000071626.17Distal intron
chr1019,331,36819,331,384+5.9843.866MALRD1ENSG00000204740.11CDS
chr6170,397,011170,397,056+4.3223.645FAM120BENSG00000112584.14Distal intron
chr121,027,9481,028,037+3.5923.192ERC1ENSG00000082805.21CDS
chr14102,082,397102,082,444-10.4663.628HSP90AA1ENSG00000080824.19CDS
chr1525,070,18325,070,260+6.5423.445SNHG14ENSG00000224078.15ncRNA
chr286,485,72886,485,783+3.5353.997KDM3AENSG00000115548.17CDS
chr1754,986,14254,986,272+5.1033.120STXBP4ENSG00000166263.13CDS
chr2010,420,68710,420,752-3.0353.754MKKSENSG00000285723.1CDS
chr1262,535,64662,535,708+3.8094.006MON2ENSG00000061987.16CDS
chr162,092,9832,093,086-8.7473.433PKD1ENSG00000008710.20CDS
chr3184,387,053184,387,091+3.2843.888CHRDENSG00000090539.16CDS
chr5141,319,963141,320,006-3.5353.925TAF7ENSG00000178913.9CDS
chr9133,917,046133,917,086-3.2623.798VAV2ENSG00000160293.17Distal intron
chr261,222,62961,222,649-3.6213.425USP34ENSG00000115464.15CDS
chr174,887,1434,887,175+3.2624.047MINK1ENSG00000141503.17CDS
chr1162,722,26462,722,317-5.5153.306HNRNPUL2ENSG00000214753.4CDS
chr1528,177,42028,177,458-3.8363.259HERC2ENSG00000128731.18CDS
chr5651,344651,426+6.3084.673CEP72ENSG00000112877.8Distal intron
chr5651,479651,534+3.0354.123CEP72ENSG00000112877.8Distal intron
chr1777,216,41977,216,512+9.9715.705SEC14L1ENSG00000129657.163' UTR
chr1528,132,13428,132,223-6.7713.886HERC2ENSG00000128731.18CDS
chr119,117,83419,117,894-10.7273.865UBR4ENSG00000127481.15CDS
chr119,117,89919,117,907-6.2843.359UBR4ENSG00000127481.15CDS
chr1528,113,61628,113,666-6.0964.683HERC2ENSG00000128731.18CDS
chr1528,114,67228,114,759-5.1033.301HERC2ENSG00000128731.18CDS
chr2020,052,31020,052,422-5.8693.036CRNKL1ENSG00000101343.15CDS
chr191,415,2251,415,281+4.2563.286DAZAP1ENSG00000071626.17Distal intron
chr2064,053,99864,054,047+3.2623.984TCEA2ENSG00000171703.17ncRNA
chr1421,360,85821,360,920-3.1063.339SUPT16HENSG00000092201.10CDS
chrX133,816,171133,816,214-21.9233.017GPC3ENSG00000147257.16Distal intron
chr16543,677543,728+3.0354.366hsa-mir-3176MI0014210miRNA
chr2117,513,13617,513,175+3.3653.363CXADRENSG00000154639.19CDS
chr2032,458,77632,458,850-4.3793.049NOL4LENSG00000197183.15Distal intron
chr1689,752,21289,752,220-3.2843.930FANCAENSG00000187741.16CDS
chr1175,879,93675,880,041+3.5354.063UVRAGENSG00000198382.9CDS
chrM15,91715,928+65.6113.253MT-TTENSG00000210195.2ncRNA
chr2240,961,430240,961,503-3.0473.031UICLMENSG00000233392.5ncRNA
chr1685,630,86485,630,933+3.0473.070GSE1ENSG00000131149.19Distal intron
chr1528,177,09228,177,126-4.3604.187HERC2ENSG00000128731.18CDS
chr1490,397,17890,397,236+4.2714.833CALM1ENSG00000198668.14CDS
chr139,385,44139,385,526+6.7883.921MACF1ENSG00000127603.32CDS
chr2062,053,68762,053,762-5.2613.224TAF4ENSG00000130699.20Distal intron
chr1079,073,81579,073,867+3.8094.167ZMIZ1ENSG00000108175.19Distal intron
chr12124,856,728124,856,769-3.1063.254SCARB1ENSG00000073060.17Distal intron
chr1955,117,24755,117,340-3.6213.187PPP1R12CENSG00000125503.13CDS
chr232,597,93032,597,959+5.7673.755BIRC6ENSG00000115760.16CDS
chr227,235,24827,235,280+4.7804.444CADENSG00000084774.14CDS
chr227,235,29427,235,344+5.1873.576CADENSG00000084774.14CDS
chr1779,981,77279,981,869-4.9233.637TBC1D16ENSG00000167291.16Distal intron
chr626,056,16026,056,192-14.0723.031H1-2ENSG00000187837.4CDS
chr7158,361,048158,361,102-11.0304.860PTPRN2ENSG00000155093.19Distal intron
chr977,315,28877,315,348+3.8094.006VPS13AENSG00000197969.14CDS
chr478,255,29878,255,371+6.6125.008FRAS1ENSG00000138759.20CDS
chrX41,086,04241,086,096+3.1113.041USP9XENSG00000124486.145' UTR
chr1319,772,32019,772,413-4.5164.323PSPC1ENSG00000121390.19CDS
chr12,298,6142,298,676+4.2714.450SKIENSG00000157933.10Distal intron
chrX53,538,83453,538,861-3.6413.026HUWE1ENSG00000086758.16CDS
chr860,865,20060,865,282+3.3653.148CHD7ENSG00000171316.14CDS
chr255,299,88155,299,920-3.1063.123CCDC88AENSG00000115355.18CDS
chr117,670,54517,670,584+3.2844.006ARHGEF10LENSG00000074964.17Distal intron
chr1923,324,66423,324,756-12.2535.191ZNF91ENSG00000167232.14ncRNA
chr189,914,0459,914,134+5.9163.000VAPAENSG00000101558.145' UTR
chr632,981,18132,981,271+27.5643.252BRD2ENSG00000204256.143' UTR
chr1226,556,36826,556,375-5.2343.086ITPR2ENSG00000123104.12CDS
chr1777,443,28177,443,351+3.8793.462SEPTIN9ENSG00000184640.20Distal intron
chr5134,927,038134,927,087+9.6943.995PCBD2ENSG00000132570.15Distal intron
chr656,476,18156,476,264-4.6603.899DSTENSG00000151914.22CDS
chr366,017,40166,017,448-4.3993.381MAGI1ENSG00000151276.24Distal intron
chr1763,774,31063,774,377+5.3773.008DDX42ENSG00000198231.145' UTR
chr1618,850,34718,850,416-5.0083.457SMG1ENSG00000157106.18CDS
chr1561,936,64861,936,722-3.1063.254VPS13CENSG00000129003.19CDS
chr17954,960955,043-3.1063.284NXNENSG00000167693.17Distal intron
chr1528,246,83128,246,894-5.0083.217HERC2ENSG00000128731.18CDS
chr610,724,56710,724,625+5.3413.109TMEM14CENSG00000111843.14CDS
chr139,388,16639,388,247+3.0383.102MACF1ENSG00000127603.32CDS
chr9133,983,165133,983,230-6.0063.778VAV2ENSG00000160293.17Distal intron
chr168,867,5248,867,600-3.7633.159CARHSP1ENSG00000153048.11Proximal intron
chr162,093,5992,093,666-4.8623.258PKD1ENSG00000008710.20CDS
chr162,093,6832,093,737-6.3673.158PKD1ENSG00000008710.20CDS
chrX53,589,67853,589,725-7.0743.155HUWE1ENSG00000086758.16CDS
chr112,304,63012,304,700+3.0353.801VPS13DENSG00000048707.15CDS
chrX20,266,74320,266,802-16.0573.487RPS6KA3ENSG00000177189.145' UTR
chr1423,095,54323,095,632+3.9423.190C14orf119ENSG00000179933.65' UTR
chr2146,533,56146,533,648+4.5144.224DIP2AENSG00000160305.18CDS
chr1776,302,58076,302,674-3.2844.006QRICH2ENSG00000129646.16Distal intron
chr1431,116,34931,116,388-6.6423.042HECTD1ENSG00000092148.14CDS
chr1528,179,14028,179,172-4.3604.187HERC2ENSG00000128731.18CDS
chr574,813,84074,813,910-4.8623.146FAM169AENSG00000198780.13CDS
chr162,103,8362,103,887-4.0793.355PKD1ENSG00000008710.20CDS
chr1777,387,54777,387,602+4.5144.224SEPTIN9ENSG00000184640.20Distal intron
chr12,272,7702,272,794+3.8363.292SKIENSG00000157933.10Distal intron
chr4150,851,917150,851,970-4.9233.547LRBAENSG00000198589.15CDS
chr1779,983,36579,983,429-3.5323.971TBC1D16ENSG00000167291.16Distal intron
chr576,403,34276,403,396+4.8063.471IQGAP2ENSG00000145703.175' UTR
chr332,861,66332,861,719+3.1113.074TRIM71ENSG00000206557.6Distal intron
chr194,037,1234,037,164+5.0464.687PIAS4ENSG00000105229.7Proximal intron
chr187,888,1057,888,168+4.5643.529PTPRMENSG00000173482.17CDS
chr1685,625,98085,626,025+3.0353.962GSE1ENSG00000131149.19Distal intron
chr633,417,77233,417,822-3.1063.254CUTAENSG00000112514.185' UTR
chr7157,819,190157,819,320-4.4083.312PTPRN2ENSG00000155093.19Distal intron
chr1112,692,854112,692,920+4.5063.162MOV10ENSG00000155363.19CDS
chr1948,960,80848,960,821+3.0354.063BAXENSG00000087088.21CDS
chr194,035,0624,035,133+9.1235.263PIAS4ENSG00000105229.7Distal intron
chr2248,581,49648,581,604+7.1504.854TAFA5ENSG00000219438.9Distal intron
chr1630,064,21930,064,223+3.8363.385ENSG00000285043ENSG00000285043.33' UTR
chr227,384,86027,384,906-3.3493.374PPM1GENSG00000115241.11CDS
chr210,169,89210,169,942+3.8363.492RRM2ENSG00000171848.16ncRNA
chr4122,934,138122,934,245+4.0793.444SPATA5ENSG00000145375.9CDS
chr1249,045,95149,045,967-4.5144.292KMT2DENSG00000167548.18CDS
chr1658,537,89258,537,914-3.8363.516CNOT1ENSG00000125107.19CDS
chr285,326,57785,326,622-4.3223.445TGOLN2ENSG00000152291.15CDS
chr1615,104,58715,104,633-3.8793.339NPIPP1ENSG00000188599.17ncRNA
chr12112,216,906112,216,922-3.2623.950HECTD4ENSG00000173064.14CDS
chr1956,106,25356,106,331-3.3653.290ZNF787ENSG00000142409.6Distal intron
chr1630,700,78830,700,831+4.8063.582SRCAPENSG00000080603.17CDS
chr119,145,91019,145,925-4.7563.262UBR4ENSG00000127481.15CDS
chr1019,389,45719,389,501+3.1113.274MALRD1ENSG00000204740.11CDS
chr1670,567,46270,567,531+5.5153.288SF3B3ENSG00000189091.13CDS
chr9114,300,624114,300,634+5.6793.047COL27A1ENSG00000196739.15CDS
chr6170,400,442170,400,544+7.7663.224FAM120BENSG00000112584.14Distal intron
chrX149,945,271149,945,402+3.2843.845EOLA2-DTENSG00000235703.7ncRNA
chr135,190,85935,190,912-9.0304.558SFPQENSG00000116560.12CDS
chr232,607,45532,607,478+5.8354.658BIRC6ENSG00000115760.16CDS
chr1681,481,59981,481,635+5.1033.169CMIPENSG00000153815.18Distal intron
chr478,282,81978,282,861+3.4943.113FRAS1ENSG00000138759.20CDS
chr1420,455,27720,455,352+4.4273.064APEX1ENSG00000100823.125' UTR
chr139,443,44539,443,475+4.3604.155MACF1ENSG00000127603.32CDS
chr12,230,4192,230,461+4.8063.556SKIENSG00000157933.10Distal intron
chr72,049,8432,049,912-3.2844.167MAD1L1ENSG00000002822.16Distal intron
chr12,247,7552,247,811+3.1063.586SKIENSG00000157933.10Distal intron
chr119,141,35719,141,405-7.1203.378UBR4ENSG00000127481.15CDS
chr439,771,60939,771,689+3.3493.121UBE2KENSG00000078140.14Distal intron
chr9134,356,398134,356,445+3.5353.925RXRAENSG00000186350.12Distal intron
chr6145,921,267145,921,386-3.3653.116SHPRHENSG00000146414.17CDS
chr162,090,6832,090,768-6.1873.356PKD1ENSG00000008710.20CDS
chr514,366,92614,366,968+3.6213.187TRIOENSG00000038382.22CDS
chr210,161,07910,161,131+4.8373.140RRM2ENSG00000171848.16ncRNA
chr1525,076,96725,076,993+3.3493.227SNHG14ENSG00000224078.15ncRNA
chr1768,248,18068,248,341+6.2563.822AMZ2ENSG00000196704.145' UTR
chr191,171,8731,171,965-4.2714.541SBNO2ENSG00000064932.16Distal intron
chr13112,701,870112,701,946+4.8063.763ATP11AENSG00000068650.19Distal intron
chr514,291,05614,291,146+6.5943.082TRIOENSG00000038382.22CDS
chr205,119,8495,119,936-5.2693.452PCNAENSG00000132646.115' UTR
chr3128,123,623128,123,747-3.5923.260RUVBL1ENSG00000175792.12CDS
chr2032,462,33432,462,433-3.9423.043NOL4LENSG00000197183.15Distal intron
chr1439,176,13339,176,149+11.6763.237PNNENSG00000100941.9CDS
chr4150,916,704150,916,738-4.8063.722LRBAENSG00000198589.15CDS
chr7158,331,792158,331,854-3.6213.841PTPRN2ENSG00000155093.19Distal intron
chr3184,322,017184,322,100+10.4613.825EIF4G1ENSG00000114867.22CDS
chr9134,375,705134,375,745+3.2623.798RXRAENSG00000186350.12Distal intron
chr171,752,9741,753,009+5.5923.047SERPINF2ENSG00000167711.14Proximal intron
chr1780,377,76980,377,797+3.5923.155RNF213ENSG00000173821.20CDS
chr119,148,56219,148,597-8.9303.227UBR4ENSG00000127481.15CDS
chr119,148,59719,148,612-6.0373.184UBR4ENSG00000127481.15CDS
chr1377,191,73777,191,802-3.6213.217MYCBP2ENSG00000005810.20CDS
chr126,943,8366,943,864+19.3805.808C12orf57ENSG00000111678.115' UTR
chr126,943,8646,943,879+16.9935.595C12orf57ENSG00000111678.115' UTR
chr261,325,37861,325,400-4.3223.353USP34ENSG00000115464.15CDS
chr482,373,74382,373,791-8.4453.421HNRNPDENSG00000138668.195' UTR
chr482,373,79182,373,829-8.1593.129HNRNPDENSG00000138668.195' UTR
chr6144,482,288144,482,314+4.2243.102UTRNENSG00000152818.19CDS
chr12,292,7802,292,807+3.8094.106SKIENSG00000157933.10Distal intron
chrX1,403,3751,403,468+7.7883.400ASMTL-AS1ENSG00000236017.8ncRNA
chr2137,188,57037,188,597+3.0383.001TTC3ENSG00000182670.14CDS
chr689,749,28589,749,336-4.5063.123MDN1ENSG00000112159.13CDS
chr210,171,49810,171,569+4.5643.651RRM2ENSG00000171848.16ncRNA
chr1147,484,39047,484,442-3.6213.247CELF1ENSG00000149187.19CDS
chr1627,495,38227,495,424-3.3653.116GTF3C1ENSG00000077235.18CDS
chr537,027,35837,027,410+4.3993.381NIPBLENSG00000164190.19CDS
chr1155,853,437155,853,678-5.4523.812GON4LENSG00000116580.20CDS
chr1077,821,23077,821,289-3.5923.192DLG5ENSG00000151208.17CDS
chr1618,841,56818,841,616-6.5423.425SMG1ENSG00000157106.18CDS
chr935,072,41535,072,478-7.4693.175VCPENSG00000165280.185' UTR
chr2038,499,49838,499,594+4.3604.187RALGAPBENSG00000170471.15CDS
chr1249,044,45049,044,499-5.4704.492KMT2DENSG00000167548.18CDS
chr16540,657540,711+4.3223.526CAPN15ENSG00000103326.12Proximal intron
chr1923,325,09423,325,180-9.7283.930ZNF91ENSG00000167232.14ncRNA
chr6144,459,339144,459,354+9.4133.094UTRNENSG00000152818.19CDS
chr6144,499,343144,499,350+6.2524.400UTRNENSG00000152818.19CDS
chr6144,499,293144,499,343+9.4214.183UTRNENSG00000152818.19CDS
chr9114,310,678114,310,694+6.5424.094COL27A1ENSG00000196739.15CDS
chr1212,181,04812,181,099-3.8094.041LRP6ENSG00000070018.9CDS
chr2235,344,29335,344,391+6.5423.813TOM1ENSG00000100284.22Distal intron
chr2235,344,21835,344,293+4.1383.727TOM1ENSG00000100284.22Distal intron
chr13113,332,526113,332,614-5.4523.651GRTP1ENSG00000139835.14Distal intron
chr656,466,15356,466,197-5.1873.708DSTENSG00000151914.22CDS
chrX53,595,32853,595,331-3.1113.345HUWE1ENSG00000086758.16CDS
chr1528,256,21628,256,285-6.8013.438HERC2ENSG00000128731.18CDS
chr1670,042,35070,042,392-3.6213.979PDXDC2P|PDXDC2P-NPIPB14PENSG00000255185.6||ENSG00000196696.13ncRNA
chr626,123,47226,123,512-4.6203.724H2BC4ENSG00000180596.83' UTR
chr1256,315,22856,315,242-4.3793.167ENSG00000144785|CNPY2ENSG00000144785.8||ENSG00000257727.65' UTR
chr1424,151,49124,151,540+4.0254.224RNF31ENSG00000092098.18CDS
chr155,094,03355,094,063-3.1113.222USP24ENSG00000162402.14CDS
chr1675,247,77975,247,811-3.1113.041ENSG00000280152ENSG00000280152.1ncRNA
chr626,216,62426,216,679-21.1814.027H2BC8ENSG00000273802.3CDS
chr626,216,52626,216,624-18.7673.027H2BC8ENSG00000273802.3CDS
chr262,705,84862,705,922+23.6593.159EHBP1ENSG00000115504.155' UTR
chr689,729,11189,729,139-4.6603.492MDN1ENSG00000112159.13CDS
chr1453,954,74253,954,809-6.0373.081BMP4ENSG00000125378.16Distal intron
chr2062,312,48862,312,513-4.7653.159LAMA5ENSG00000130702.15CDS
chr1435,809,14735,809,229-5.0464.623RALGAPA1ENSG00000174373.175' UTR
chr1942,251,84242,251,889-3.2703.042ENSG00000268643|ERFENSG00000105722.10||ENSG00000268643.2Distal intron
chr5652,018652,082+3.5353.997CEP72ENSG00000112877.8Distal intron
chr1782,005,86482,005,954+24.1373.206ASPSCR1ENSG00000169696.16Distal intron
chr1687,844,53987,844,552-4.5164.192SLC7A5ENSG00000103257.9Distal intron
chr119,185,27719,185,285-4.6364.506UBR4ENSG00000127481.15CDS
chr4122,220,374122,220,449+4.0844.236KIAA1109ENSG00000138688.17CDS
chr1165,616,33065,616,462+5.5853.596PCNX3ENSG00000197136.5CDS
chr9133,889,565133,889,614-3.8363.224VAV2ENSG00000160293.17Distal intron
chr1780,319,19980,319,304+6.3084.736RNF213ENSG00000173821.20CDS
chr2241,812,352241,812,411+4.0793.471NEU4ENSG00000204099.12Distal intron
chr1179,954,902179,955,006+5.1873.552CEP350ENSG00000135837.165' UTR
chr2145,438,91045,438,975+7.2593.010COL18A1ENSG00000182871.16Distal intron
chr7158,359,711158,359,749-4.1383.602PTPRN2ENSG00000155093.19Distal intron
chrX53,554,82653,554,852-4.9233.717HUWE1ENSG00000086758.16CDS
chr1772,553,22872,553,320-4.3223.853LINC00511ENSG00000227036.10ncRNA
chr2050,191,02250,191,091+5.5853.364CEBPBENSG00000172216.6CDS
chr2171,160,064171,160,095-3.5323.886TLK1ENSG00000198586.14Proximal intron
chr689,774,64789,774,676-3.8363.224MDN1ENSG00000112159.13CDS
chr1075,403,78875,403,902+4.7563.088ZNF503-AS2ENSG00000237149.5ncRNA
chr9134,362,765134,362,790+3.1063.158RXRAENSG00000186350.12Distal intron
chr5140,507,840140,507,860+3.0353.845ANKHD1|ANKHD1-EIF4EBP3ENSG00000254996.5||ENSG00000131503.21CDS
chr17317,426317,544-4.9234.105RPH3ALENSG00000181031.16Distal intron
chr1528,111,92028,111,973-4.3223.728HERC2ENSG00000128731.18CDS
chr2224,067,13324,067,180+3.4943.031CABIN1ENSG00000099991.18CDS
chr1730,731,94330,732,002+5.5283.632SUZ12P1ENSG00000264538.7ncRNA
chr1714,309,47514,309,552+5.7673.731HS3ST3B1ENSG00000125430.9Distal intron
chr6144,482,208144,482,262+4.9733.023UTRNENSG00000152818.19CDS
chrM14,46414,482-44.9183.299MT-ND6ENSG00000198695.2CDS
chr2145,438,41345,438,444+3.5324.148COL18A1ENSG00000182871.16Distal intron
chr1525,075,77225,075,869+14.4594.311SNHG14ENSG00000224078.15ncRNA
chr9136,840,748136,840,775+3.1063.086RABL6ENSG00000196642.19CDS
chr1689,739,51889,739,540-3.7183.038FANCAENSG00000187741.16CDS
chrX123,636,078123,636,147-5.4523.756THOC2ENSG00000125676.20CDS
chr1528,179,01028,179,029-3.3493.193HERC2ENSG00000128731.18CDS
chr11637,385637,440+3.5193.055DRD4ENSG00000069696.7CDS
chr1685,629,83885,629,875+3.0353.845GSE1ENSG00000131149.19Distal intron
chr17314,300314,447-5.7903.330RPH3ALENSG00000181031.16Distal intron
chr1716,091,86416,091,910-3.1063.224NCOR1ENSG00000141027.22CDS
chr194,035,5704,035,616+5.4523.775PIAS4ENSG00000105229.7Distal intron
chr194,035,6164,035,659+4.3223.473PIAS4ENSG00000105229.7Distal intron
chr1528,141,59728,141,630-3.3653.290HERC2ENSG00000128731.18CDS
chr1421,351,52921,351,561-3.2843.888SUPT16HENSG00000092201.103' UTR
chr2145,438,59245,438,664+5.1033.281COL18A1ENSG00000182871.16Distal intron
chr210,399,66910,399,734+4.5164.292HPCAL1ENSG00000115756.13Distal intron
chr9134,331,974134,332,012+3.3493.082RXRAENSG00000186350.12Distal intron
chr174,672,7274,672,792-3.5324.116PELP1ENSG00000141456.16CDS
chr1154,176,225154,176,250-3.5923.227TPM3ENSG00000143549.21CDS
chr656,487,11256,487,205-5.1873.552DSTENSG00000151914.22CDS
chr174,940,6264,940,719+3.5923.292RNF167ENSG00000108523.165' UTR
chrX1,531,2061,531,365-6.3084.830P2RY8ENSG00000182162.11Distal intron
chr1226,628,03226,628,110-12.5343.235ITPR2ENSG00000123104.12CDS
chr6170,398,050170,398,141+7.3783.494FAM120BENSG00000112584.14Distal intron
chr1876,492,65376,492,740-4.2563.093ZNF516ENSG00000101493.11Distal intron
chr689,743,15489,743,194-3.5923.408MDN1ENSG00000112159.13CDS
chr2145,432,68445,432,777+3.8653.183COL18A1ENSG00000182871.16Distal intron
chr5133,052,035133,052,261+10.0633.567HSPA4ENSG00000170606.16CDS
chr1618,819,57518,819,625-5.2883.580SMG1ENSG00000157106.18CDS
chr935,712,97735,713,039-4.3993.381TLN1ENSG00000137076.21CDS
chr3184,331,471184,331,520+7.5354.140EIF4G1ENSG00000114867.22CDS
chr1933,459,11533,459,248-6.5144.216PEPDENSG00000124299.16Distal intron
chr1592,992,85792,992,881+4.1383.374CHD2ENSG00000173575.23CDS
chrX53,532,86153,532,897-4.5643.605HUWE1ENSG00000086758.163' UTR
chr261,214,17361,214,195-5.0473.526USP34ENSG00000115464.15CDS
chr13113,327,861113,327,926-3.3653.178GRTP1ENSG00000139835.14Distal intron
chr1471,013,00771,013,089+3.3653.116PCNX1ENSG00000100731.16CDS
chr12123,513,945123,513,961-4.3223.645RILPL1ENSG00000188026.13Distal intron
chr632,980,91232,980,981+12.8075.630BRD2ENSG00000204256.143' UTR
chr17245,725245,879-14.2104.123RPH3ALENSG00000181031.16Distal intron
chr1737,234,97737,235,013-3.7794.121ACACAENSG00000278540.5CDS
chr299,337,46899,337,573+6.1123.047EIF5BENSG00000158417.11CDS
chr9131,482,376131,482,440+5.1033.321PRRC2BENSG00000288701.1CDS
chr1525,115,57525,115,657+10.9693.039SNHG14ENSG00000224078.15ncRNA
chr2041,487,75041,487,782-3.6213.187CHD6ENSG00000124177.16CDS
chr1935,738,79835,738,851+3.3493.474KMT2BENSG00000272333.83' UTR
chr2216,008,571216,008,656-3.2623.878MREGENSG00000118242.16Distal intron
chr2208,255,007208,255,066-14.3964.495IDH1ENSG00000138413.145' UTR
chr215,536,43715,536,493-4.3993.460NBASENSG00000151779.14CDS
chr3195,112,808195,112,880-3.0353.801XXYLT1ENSG00000173950.16Distal intron
chr1739,461,66939,461,682+3.1063.006CDK12ENSG00000167258.155' UTR
chr12,249,1742,249,242+6.0063.980SKIENSG00000157933.10Distal intron
chr1688,478,98288,479,080+3.0473.010ZFPM1ENSG00000179588.9Distal intron
chr2239,397,630239,397,708-3.1063.339HDAC4ENSG00000068024.18Distal intron
chr747,562,98147,563,040-3.7794.121TNS3ENSG00000136205.17Distal intron
chr352,290,38852,290,427+3.0353.754GLYCTKENSG00000168237.18CDS
chr5140,441,101140,441,142+4.3993.484ANKHD1|ANKHD1-EIF4EBP3ENSG00000131503.21||ENSG00000254996.5CDS
chr4150,848,817150,848,838-3.5324.047LRBAENSG00000198589.15CDS
chr1454,902,66054,902,789-3.5324.047GCH1ENSG00000131979.20CDS
chr6170,397,381170,397,461+10.0464.385FAM120BENSG00000112584.14Distal intron
chr1685,617,41485,617,484+5.7703.254GSE1ENSG00000131149.19Distal intron
chr1075,692,73275,692,879+7.6263.378LRMDAENSG00000148655.15Distal intron
chr8123,768,576123,768,627+3.0353.754FAM91A1ENSG00000176853.165' UTR
chr42,693,7312,693,875+6.6124.902FAM193AENSG00000125386.16CDS
chr2247,160,54147,160,659+6.0284.552TBC1D22AENSG00000054611.14Distal intron
chr1918,768,81818,768,888+3.8363.259CRTC1ENSG00000105662.165' splice site
chr1681,006,76381,006,874-3.4943.222ENSG00000286221|CMC2ENSG00000103121.9||ENSG00000286221.15' UTR
chr473,404,29473,404,327+400.0003.185ALBENSG00000163631.175' UTR
chr2169,798,884169,798,979+9.0903.728SSBENSG00000138385.165' UTR
chr899,192,87599,192,891+3.5323.971VPS13BENSG00000132549.20CDS
chr1590,994,41090,994,493-3.3493.562PRC1ENSG00000198901.14CDS
chr1618,850,23718,850,303-4.5063.315SMG1ENSG00000157106.18CDS
chr2145,423,83945,423,894+3.5923.353COL18A1ENSG00000182871.16Distal intron
chr139,358,81839,358,864+4.0844.082MACF1ENSG00000127603.32CDS
chr1153,662,336153,662,400-5.7673.800ILF2ENSG00000143621.17CDS
chr967,717,69767,717,848-3.2624.016FAM27E3ENSG00000274026.2ncRNA
chr72,201,7432,201,812-3.8363.492MAD1L1ENSG00000002822.16Distal intron
chr1777,432,77177,432,830+3.5324.471SEPTIN9ENSG00000184640.20Distal intron
chr3184,331,341184,331,365+7.6284.843EIF4G1ENSG00000114867.22CDS
chr3184,331,330184,331,341+4.0844.082EIF4G1ENSG00000114867.22CDS
chr1143,414,72043,414,783+3.6213.402TTC17ENSG00000052841.15CDS
chr1688,716,21388,716,267-5.8263.526PIEZO1ENSG00000103335.22CDS
chr191,170,1471,170,218-3.4943.093SBNO2ENSG00000064932.16Distal intron
chr1226,711,19126,711,210-9.1633.751ITPR2ENSG00000123104.12CDS
chr1157,326,37657,326,451-3.1063.224SSRP1ENSG00000149136.9CDS
chr1923,324,92823,325,008-9.9403.742ZNF91ENSG00000167232.14ncRNA
chr253,970,72753,970,802-17.3783.616PSME4ENSG00000068878.15CDS
chrX133,818,174133,818,316-24.1373.083GPC3ENSG00000147257.16Distal intron
chr12,267,3552,267,417+6.0273.389SKIENSG00000157933.10Distal intron
chr1019,331,42519,331,483+6.2563.867MALRD1ENSG00000204740.11CDS
chr1688,517,84488,517,957+3.7633.434ZFPM1ENSG00000179588.9Distal intron
chr10110,567,733110,567,816+4.3993.508SMC3ENSG00000108055.115' UTR
chr1156,325,035156,325,091-4.6203.348CCT3ENSG00000163468.15CDS
chr1618,852,43918,852,464-4.6603.840SMG1ENSG00000157106.18CDS
chr1618,852,42018,852,439-4.3993.792SMG1ENSG00000157106.18CDS
chr1630,700,71930,700,761+4.2714.259SRCAPENSG00000080603.175' UTR
chr2158,457,095158,457,131+3.1113.167PKP4ENSG00000144283.235' UTR
chr19954,848954,875+4.6364.312ARID3AENSG00000116017.11Distal intron
chr6170,397,870170,397,952+4.0903.118FAM120BENSG00000112584.14Distal intron
chr6170,397,280170,397,327+4.7804.497FAM120BENSG00000112584.14Distal intron

The following table contains identified motifs, where a motif is a short sequence of nucleotides that is significantly enriched in called peaks. Motifs were identified using HOMER's findMotifsGenome.pl tool. Motifs were called at multiple lengths, and results from all examined lengths are aggregated in the table.

The following columns are included in the table:

  •  Motif: logo plot for the identified motif.
  •  IUPAC: sequence of motif in IUPAC code.
  •  Motif length: length of the called motif.
  •  P-value: Significance of the called motif.
  •  -log10(p-value): log transformed significance, a larger number indicates a greater significance.
  •  % Peaks: percent of examined peaks with the identified motif.
  •  % Background: percent of non-peak background regions with the motif.

Please note, this table is interactive. You can search for specific sequences, and can sort the table by any of the columns. The search buttons at thr bottom of the table allow for specific filtering by sequence or motif length.

ENCSR041NUV (HepG2) Motifs


Motif IUPAC sequence Motif length P-value -log10(p-value) % Peaks % Background
GACUACAGGUCA121e-1331.730.980.01
WGGAGAUGGC101e-1330.217.372.42
CGUCAGUG81e-1229.347.372.47