CPSF6


This analysis report summarizes CPSF6 eCLIP data from ENCODE. The current tab provides an overview of the results, and the other tabs list identified peaks and motifs.

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Experiment Summary


Experiment ID File ID Sample Antibody source Antibody ID Antibody lot Release date Laboratory Number of peaks
ENCSR532VUBENCFF635NZZK562Bethyl LabsA301-356A12015-07-15Gene Yeo, UCSD791

CPSF6 Peak Assignments


The following plots show the assignment of peaks into different genic features:

Introns contain other subdivisions, please see the subsequent plot for a breakdown of those features.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

CPSF6 Intron Assignments


The following plots show the assignment of peaks into different intronic features:

  •  5’ splice site: the peak is within the first 100 bp of an intron (5’ to 3’ direction
  •  3’ splice site: the peak is within the last 100 bp of an intron (5’ to 3’ direction)
  •  Proximal intron: the peak is within 100 bp to 500 bp of the nearest exon
  •  Distal intron: greater than 500 bp away from the nearest exon

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.

CPSF6 Motifs


The following plot shows a summary of the top five motifs by significance in each experiment. Motifs were detected with varying length parameters, you may observe a similar motif with different number of bases included multiple times. A motif present in more peaks and with a higher significance will be in the upper right quadrant of the plot, while the lower left quadrant has motifs that are less significant and in fewer peaks.

This plot is interactive. You can hover over the bars to see the percentage and number of identified peaks. You can select which features to show by toggling the region names in the legend, and you can download the plot by moving your mouse to the top of the plot and clicking on the camera icon.



The following table contains called CPSF6 peaks. To identify peaks, clusters (regions of read enrichment) in the immunoprecipitated (IP) samples were found using the peak calling tool CLIPper. To account for background signal, a cluster was identified as a peak if the log2 fold enrichment over input was ≥ 3 and the p-value ≤ 0.001.

Peaks were annotated using transcript information from GENCODE. Each annotated peak is labeled with specific annotation feature types, first split by coding and non-coding transcripts, then by transcript regions, and then by intron/exon proximity regions. For overlapping transcript regions, the following hierarchy is used to label the region: coding sequence (CDS), 5’ or 3’ untranslated region (UTR), intron, non-coding exon, then non-coding intron. For example, if a peak is in the 5’ UTR of one transcript that overlaps an intron of another transcript, the peak region will be labeled as 5’ UTR. All gene annotations are from GENCODE release v41.

The following columns are included in the table:

  •  Chromosome: chromosome where the peak is located.
  •  Peak start: start coordinate for the peak.
  •  Peak stop: stop coordinate for the peak.
  •  Strand: strand of DNA where the peak was called.
  •  -log10(p-value): significance of the cluster call by CLIPper. Values are log transformed so a larger number indicates a greater significance.
  •  log2(fold change): log transformed fold enrichment of the IP signal over a matched input.
  •  Gene name: name (symbol) of the gene that overlaps with the peak.
  •  Ensembl ID: unique identifer of the gene that overlaps with the peak.
  •  Feature: which part of the listed gene overlaps with the peak.

Please note, this table is interactive. You can search for specific genes or features, and can sort the table by any of the columns.

ENCSR532VUB (K562) Peaks


Chromosome Peak start Peak stop Strand -log10(p-value) log2(fold change) Gene name Ensembl ID Feature
chr1194,969,98494,970,097-4.4313.450CWC15ENSG00000150316.12CDS
chr185,252,53085,252,605-3.9864.116C1orf52ENSG00000162642.143' UTR
chr1685,676,10485,676,191+11.4574.692GSE1ENSG00000131149.193' UTR
chr2169,808,519169,808,553+5.0053.026SSBENSG00000138385.16CDS
chr2189,475,381189,475,471+4.4833.627WDR75ENSG00000115368.10CDS
chr2013,775,93513,776,108-4.2163.991ESF1ENSG00000089048.15CDS
chr689,662,15789,662,240-3.0363.869MDN1ENSG00000112159.13CDS
chr1276,049,78276,049,785-17.4003.712NAP1L1ENSG00000187109.15CDS
chr3186,789,913186,790,050-13.1013.632RFC4ENSG00000163918.12CDS
chr1214,646,359214,646,426+4.1524.409CENPFENSG00000117724.14CDS
chr1544,404,71844,404,785+3.3134.234GOLM2ENSG00000166734.20Distal intron
chr271,332,40271,332,468+5.5724.691ZNF638ENSG00000075292.19Proximal intron
chr46,641,9266,642,010+8.3623.270MRFAP1ENSG00000179010.163' UTR
chr1214,622,093214,622,149+3.3133.865CENPFENSG00000117724.14CDS
chr2241,628,11741,628,150+6.8034.124XRCC6ENSG00000196419.13CDS
chr2221,760,57621,760,715-10.4473.455MAPK1ENSG00000100030.153' UTR
chr1068,773,00468,773,102+9.4313.692CCAR1ENSG00000060339.14CDS
chr16,223,7946,223,800-3.9503.670ICMTENSG00000116237.163' UTR
chr170,250,38770,250,444+6.9693.852SRSF11ENSG00000116754.14CDS
chr170,250,44470,250,499+6.0563.307SRSF11ENSG00000116754.14CDS
chr2127,746,506127,746,611-4.0913.136WDR33ENSG00000136709.12Distal intron
chr1439,181,92839,182,035+12.3174.826PNNENSG00000100941.93' UTR
chr67,301,5197,301,573-3.3133.923SSR1ENSG00000124783.14CDS
chr285,318,05785,318,160-3.0364.019TGOLN2ENSG00000152291.153' UTR
chr4145,119,979145,120,055+3.0363.869ABCE1ENSG00000164163.11CDS
chr2053,568,67753,568,736-4.6394.293ZNF217ENSG00000171940.143' UTR
chr998,012,43598,012,446+46.0295.258ANP32BENSG00000136938.9CDS
chr998,012,42298,012,435+47.7464.915ANP32BENSG00000136938.9CDS
chr998,012,42098,012,422+38.1014.621ANP32BENSG00000136938.9CDS
chr998,012,44698,012,472+69.8654.178ANP32BENSG00000136938.9CDS
chr170,250,72570,250,772+6.8034.019SRSF11ENSG00000116754.14CDS
chr170,250,61370,250,725+13.1713.533SRSF11ENSG00000116754.14CDS
chr1214,620,819214,620,858+3.0363.812CENPFENSG00000117724.14CDS
chr1550,481,80550,481,921+5.6413.391USP8ENSG00000138592.14CDS
chr228,946,72428,946,799+5.3023.055WDR43ENSG00000163811.12CDS
chr7118,192,063118,192,133+11.0145.430LSM8ENSG00000128534.83' UTR
chr7118,191,912118,192,063+12.3823.580LSM8ENSG00000128534.8CDS
chr2169,637,650169,637,722+6.5104.055PPIGENSG00000138398.173' UTR
chr2133,558,97933,559,019+400.0005.844SONENSG00000159140.223' UTR
chr2133,559,01933,559,040+400.0005.428SONENSG00000159140.223' UTR
chr3184,173,476184,173,537+25.9465.417DVL3ENSG00000161202.203' UTR
chr3184,173,537184,173,590+20.4465.054DVL3ENSG00000161202.203' UTR
chr3184,173,425184,173,476+6.9424.400DVL3ENSG00000161202.203' UTR
chr46,708,4826,708,555-3.8714.399MRFAP1L1ENSG00000178988.113' UTR
chr2033,853,54533,853,612+6.5313.256CHMP4BENSG00000101421.4CDS
chr699,411,27199,411,299-3.5913.973PNISRENSG00000132424.17Proximal intron
chr699,411,29999,411,380-8.9923.624PNISRENSG00000132424.17Proximal intron
chr1147,466,13447,466,264-8.6303.642CELF1ENSG00000149187.193' UTR
chr311,316,55011,316,680+20.5646.460ATG7ENSG00000197548.13Distal intron
chr12123,336,422123,336,506-3.4243.535SBNO1ENSG00000139697.14CDS
chr192,114,1782,114,249-3.8363.330AP3D1ENSG00000065000.20CDS
chr1750,719,61350,719,655+3.4243.337LUC7L3ENSG00000108848.165' UTR
chr2238,452,136238,452,209+3.5914.076ASB1ENSG00000065802.123' UTR
chr1624,215,89424,215,997+7.7773.646PRKCBENSG00000166501.143' UTR
chr1165,084,83265,084,965+6.2163.984ZFPL1ENSG00000162300.13CDS
chr1197,084,237197,084,360-3.4243.213ASPMENSG00000066279.19CDS
chr13106,543,848106,543,895-4.2453.122ARGLU1ENSG00000134884.153' UTR
chr1544,554,55044,554,624+7.8643.033EIF3JENSG00000104131.13CDS
chr218,401,7808,401,818+25.3655.248ENSG00000280441ENSG00000280441.3ncRNA
chr1269,274,23969,274,310+3.9864.197CPSF6ENSG00000111605.183' UTR
chr2202,303,383202,303,430+5.5664.327NOP58ENSG00000055044.11CDS
chr2152,671,318152,671,383-4.7184.489PRPF40AENSG00000196504.21CDS
chr998,015,36398,015,368+58.6933.915ANP32BENSG00000136938.9CDS
chr1610,482,37710,482,470+27.6715.228ATF7IP2ENSG00000166669.143' UTR
chr1421,459,49821,459,611-3.2473.302RAB2BENSG00000129472.153' UTR
chr2105,345,314105,345,475+6.1693.491C2orf49ENSG00000135974.10CDS
chr170,239,47470,239,520+4.0913.010SRSF11ENSG00000116754.14CDS
chr7103,322,549103,322,630-9.1834.357DNAJC2ENSG00000105821.15CDS
chr76,642,5786,642,634+3.1643.254ZNF316ENSG00000205903.7CDS
chr1590,962,21890,962,281+3.6634.143RCCD1ENSG00000166965.133' UTR
chr1276,059,79676,059,808-27.9783.011NAP1L1ENSG00000187109.15CDS
chr2137,515,05037,515,166+5.3813.249DYRK1AENSG00000157540.223' UTR
chr3160,416,294160,416,363+5.3793.254SMC4ENSG00000113810.16CDS
chr344,754,21944,754,304-4.1524.166KIAA1143ENSG00000163807.6CDS
chr1074,327,39974,327,560+3.5914.207ADKENSG00000156110.15Distal intron
chr244,231,25144,231,464+3.8363.399PPM1BENSG00000138032.213' UTR
chr1751,056,44551,056,484-3.3413.915SPAG9ENSG00000008294.22CDS
chr269,942,85969,942,929+3.1643.169MXD1ENSG00000059728.113' UTR
chr1201,969,547201,969,672+3.1643.330TIMM17AENSG00000134375.11CDS
chr126,769,9636,769,991+14.5383.482PTMSENSG00000159335.18CDS
chr13106,558,998106,559,061-7.7084.302ARGLU1ENSG00000134884.15Proximal intron
chr473,258,05273,258,114-3.8714.122ANKRD17ENSG00000132466.20Proximal intron
chr1732,370,24332,370,368+8.8674.109ZNF207ENSG00000010244.193' UTR
chr5132,616,049132,616,126+3.5914.246ENSG00000283782|RAD50ENSG00000283782.2||ENSG00000113522.14CDS
chr44,274,5604,274,675-5.3793.484LYARENSG00000145220.14CDS
chr71,438,5041,438,560-3.9503.337MICALL2ENSG00000164877.19Proximal intron
chr2231,460,561231,460,564-54.7113.524NCLENSG00000115053.17CDS
chr2231,460,485231,460,561-70.5543.431NCLENSG00000115053.17CDS
chr894,527,27594,527,366-5.7613.146VIRMAENSG00000164944.12CDS
chr5163,475,507163,475,650+5.9823.428HMMRENSG00000072571.20CDS
chr9131,478,641131,478,698+3.3133.923PRRC2BENSG00000288701.15' splice site
chr196,414,4486,414,478-21.5144.373KHSRPENSG00000088247.193' UTR
chr196,414,4786,414,514-24.3494.051KHSRPENSG00000088247.193' UTR
chr196,414,5146,414,536-9.8663.618KHSRPENSG00000088247.193' UTR
chr162,817,3622,817,427+4.3124.246PRSS21ENSG00000007038.115' splice site
chr1246,358,26846,358,391-5.9363.003SLC38A2ENSG00000134294.143' UTR
chr1543,795,90043,796,037+21.9574.669SERF2ENSG00000140264.213' UTR
chr566,078,62066,078,712+3.5914.026ERBINENSG00000112851.163' UTR
chr2231,460,852231,460,866-16.0244.428NCLENSG00000115053.17CDS
chr2231,460,814231,460,852-13.6363.281NCLENSG00000115053.17CDS
chr1836,025,48436,025,622-3.1643.399RPRD1AENSG00000141425.183' UTR
chr12103,947,632103,947,663+21.2833.681HSP90B1ENSG00000166598.16CDS
chr624,785,70424,785,826+6.1493.116GMNNENSG00000112312.10CDS
chr1256,712,50456,712,552-11.7803.298NACAENSG00000196531.14CDS
chr1113,728,84213,728,907+4.4354.254FAR1ENSG00000197601.143' UTR
chr813,083,39013,083,507-3.1643.622DLC1ENSG00000164741.153' UTR
chr2132,734,83132,734,920-3.0363.973PAXBP1ENSG00000159086.153' UTR
chr295,108,22495,108,360-6.7213.104MRPS5ENSG00000144029.14CDS
chr342,646,00142,646,081+3.9864.116NKTRENSG00000114857.193' UTR
chr296,894,30896,894,351-7.8403.520FAM178BENSG00000168754.15Proximal intron
chr5138,158,137138,158,231-6.7224.781BRD8ENSG00000112983.18Distal intron
chr1568,780,08868,780,143-28.0333.897ANP32AENSG00000140350.15CDS
chr7121,142,163121,142,219+3.5413.384CPED1ENSG00000106034.185' splice site
chr158,654,89458,654,967-3.3134.116MYSM1ENSG00000162601.123' UTR
chr1938,841,23038,841,354-29.4195.081HNRNPLENSG00000104824.18Distal intron
chr1439,181,07339,181,118+5.1183.388PNNENSG00000100941.9CDS
chr1543,403,09443,403,171-4.4354.298TP53BP1ENSG00000067369.143' UTR
chr170,250,79270,250,858+12.0903.887SRSF11ENSG00000116754.14CDS
chr1242,313,68942,313,768-6.0173.234ZCRB1ENSG00000139168.9CDS
chr8116,848,998116,849,032-13.3593.418RAD21ENSG00000164754.16CDS
chr16,888,0566,888,184+8.4615.146CAMTA1ENSG00000171735.203' UTR
chr628,613,73928,613,826-5.3793.526ZBED9ENSG00000232040.4ncRNA
chr1918,990,90118,990,973-7.7784.191SUGP2ENSG00000064607.173' UTR
chr1918,990,97318,991,048-8.1183.430SUGP2ENSG00000064607.173' UTR
chr1716,121,21716,121,270-4.8593.228NCOR1ENSG00000141027.22CDS
chr2232,738,604232,738,664+6.9604.931GIGYF2ENSG00000204120.163' UTR
chrX70,344,07670,344,163+5.8595.238KIF4AENSG00000090889.125' splice site
chr7128,794,347128,794,425+4.3453.275CCDC136ENSG00000128596.17CDS
chr1134,098,89734,098,965+15.1995.154CAPRIN1ENSG00000135387.213' UTR
chr1134,098,96534,099,021+15.0124.452CAPRIN1ENSG00000135387.213' UTR
chr2032,436,83532,436,907+3.3134.026ASXL1ENSG00000171456.21CDS
chr2231,462,013231,462,017-30.8594.138NCLENSG00000115053.17CDS
chr2231,461,957231,462,013-42.6764.019NCLENSG00000115053.17CDS
chr657,099,95257,100,034+8.9014.274ZNF451ENSG00000112200.17Distal intron
chr1938,841,15938,841,212-7.1273.165HNRNPLENSG00000104824.18Distal intron
chr12115,959,480115,959,548-3.0364.063MED13LENSG00000123066.93' UTR
chr9136,840,321136,840,360+9.4153.904RABL6ENSG00000196642.19CDS
chr628,613,10628,613,172-3.5413.283ZBED9ENSG00000232040.4ncRNA
chr1109,500,298109,500,399+3.9864.394CYB561D1ENSG00000174151.153' UTR
chr1782,294,83882,294,890+3.8714.169ENSG00000260563ENSG00000260563.3ncRNA
chr170,145,65470,145,835-4.1333.535LRRC40ENSG00000066557.6CDS
chr1242,313,87342,313,906-4.1524.256ZCRB1ENSG00000139168.9CDS
chr1242,313,90642,313,976-3.9503.378ZCRB1ENSG00000139168.9CDS
chr1877,973,15777,973,258-4.0913.438LINC01029ENSG00000265843.3ncRNA
chr1147,746,19447,746,292-4.2163.415FNBP4ENSG00000109920.13CDS
chr9112,687,283112,687,416-3.1643.293INIPENSG00000148153.143' UTR
chr9128,694,009128,694,016+53.8254.029SETENSG00000119335.18CDS
chr9128,693,962128,694,009+82.2423.779SETENSG00000119335.18CDS
chr9128,694,016128,694,039+68.7023.436SETENSG00000119335.18CDS
chr9128,694,039128,694,042+37.3253.176SETENSG00000119335.18CDS
chr1165,499,75565,499,788+400.0003.227MALAT1ENSG00000251562.10ncRNA
chr12110,719,917110,720,005-4.7293.523PPP1CCENSG00000186298.123' UTR
chr2216,788,77316,788,877-3.3133.976XKR3ENSG00000172967.8Distal intron
chr969,709,55869,709,643-3.5914.026PTAR1ENSG00000188647.133' UTR
chr143,384,75943,384,900-8.4214.095MED8ENSG00000159479.173' UTR
chrX151,409,238151,409,362+5.9203.834VMA21ENSG00000160131.143' UTR
chr9131,141,093131,141,150+8.2593.103NUP214ENSG00000126883.19Proximal intron
chr7117,223,770117,223,844+6.6654.514ST7ENSG00000004866.223' UTR
chr588,195,18088,195,334-5.0024.830TMEM161BENSG00000164180.143' UTR
chr915,471,19115,471,334-7.5895.183PSIP1ENSG00000164985.15CDS
chr8134,793,074134,793,128-12.3775.676MIR30DHGENSG00000259820.1ncRNA
chr347,635,24847,635,346-10.1873.241SMARCC1ENSG00000173473.11CDS
chr4106,328,128106,328,242+4.6394.330AIMP1ENSG00000164022.18CDS
chr171,072,17971,072,234-3.6863.339ZRANB2ENSG00000132485.14CDS
chr5139,363,858139,363,923+5.0273.707PAIP2ENSG00000120727.13CDS
chr9134,040,096134,040,188-3.3134.026BRD3ENSG00000169925.17CDS
chr2134,105,95234,106,056+9.6555.289SLC5A3ENSG00000198743.73' UTR
chr190,027,55790,027,690+8.6373.882ZNF326ENSG00000162664.17CDS
chr112,951,7772,951,812-5.5843.019NAP1L4ENSG00000205531.13CDS
chr2186,502,499186,502,581+6.8933.684ZC3H15ENSG00000065548.18CDS
chr413,367,86913,367,932-4.6013.198RAB28ENSG00000157869.163' UTR
chr1720,880,20920,880,357+6.9424.099CCDC144NL-AS1ENSG00000233098.10ncRNA
chr2220,063,23220,063,326+5.7613.146TANGO2ENSG00000183597.163' splice site
chr1391,354,48091,354,495+3.3134.026MIR17HGENSG00000215417.13ncRNA
chr7103,312,248103,312,355+5.2874.715PMPCBENSG00000105819.14CDS
chrX65,518,00165,518,116-10.7984.154LAS1LENSG00000001497.18CDS
chrX65,518,11665,518,217-8.3203.985LAS1LENSG00000001497.18CDS
chr12103,947,732103,947,796+20.7613.262HSP90B1ENSG00000166598.163' UTR
chr775,416,60175,416,701+4.7863.234NSUN5P1ENSG00000223705.11ncRNA
chr1031,884,34231,884,551-4.6394.293ARHGAP12ENSG00000165322.18Distal intron
chr1491,223,16891,223,309+30.7446.158DGLUCYENSG00000133943.21Distal intron
chr162,458,2862,458,314+3.5413.246CCNFENSG00000162063.133' UTR
chr128,209,97528,210,042-3.4243.256DNAJC8ENSG00000126698.11CDS
chr12110,490,134110,490,339+3.1723.169FAM216AENSG00000204856.12CDS
chr3112,541,802112,541,885-4.1524.256ATG3ENSG00000144848.11CDS
chr1455,298,55855,298,634+4.2163.454FBXO34ENSG00000178974.11Proximal intron
chr9133,097,755133,097,857-4.3124.246RALGDSENSG00000160271.163' UTR
chr2031,606,37531,606,483+3.5883.245ID1ENSG00000125968.93' UTR
chr2138,178,64938,178,727+5.5725.145KCNJ15ENSG00000157551.19Distal intron
chr1205,720,617205,720,654-19.0144.133NUCKS1ENSG00000069275.13CDS
chr2115,738,95815,739,055+4.1524.374USP25ENSG00000155313.16Distal intron
chr829,064,66929,064,747+7.8794.973HMBOX1ENSG00000147421.18ncRNA
chr829,064,63129,064,669+3.6634.019HMBOX1ENSG00000147421.18ncRNA
chr829,064,00529,064,087+5.5843.180HMBOX1ENSG00000147421.18ncRNA
chr1222,713,774222,713,870+3.0364.143BROXENSG00000162819.12Proximal intron
chr299,363,82899,363,863+9.3355.394EIF5BENSG00000158417.11CDS
chr299,363,64399,363,828+25.7634.195EIF5BENSG00000158417.11CDS
chr1165,754,224165,754,275-4.3453.042TMCO1ENSG00000143183.18CDS
chr247,161,72047,161,762-8.3643.490CALM2ENSG00000143933.20CDS
chr2152,672,460152,672,498-3.5914.166PRPF40AENSG00000196504.21CDS
chr2114,485,63414,485,708-5.6413.573SAMSN1ENSG00000155307.193' UTR
chr1150,226,607150,226,676-16.8903.604ANP32EENSG00000143401.15CDS
chr6152,971,152152,971,261-8.3564.227FBXO5ENSG00000112029.10CDS
chr44,274,4704,274,552-3.9503.815LYARENSG00000145220.14CDS
chr44,274,3654,274,470-7.5573.306LYARENSG00000145220.14CDS
chr413,337,20013,337,258+12.0305.036HSP90AB2PENSG00000205940.8ncRNA
chr2132,607,64732,607,661-5.5724.691CFAP298|CFAP298-TCP10LENSG00000265590.10||ENSG00000159079.19CDS
chr2041,081,17941,081,241+9.6503.575TOP1ENSG00000198900.7CDS
chr1543,814,94543,814,999-3.5914.076MFAP1ENSG00000140259.7CDS
chr569,177,58569,177,707+6.4833.093CCNB1ENSG00000134057.15CDS
chrX136,511,921136,511,985+5.2874.450HTATSF1ENSG00000102241.12CDS
chr998,011,33798,011,389+83.8414.377ANP32BENSG00000136938.9CDS
chr998,011,29398,011,337+44.4513.606ANP32BENSG00000136938.9CDS
chr616,148,15916,148,212+4.3124.246MYLIPENSG00000007944.153' UTR
chrX123,620,497123,620,648-5.6813.305THOC2ENSG00000125676.20Proximal intron
chr1758,000,99858,001,133-5.5083.265SRSF1ENSG00000136450.133' UTR
chr193,876,48293,876,532-3.0363.923DNTTIP2ENSG00000067334.14CDS
chr12292,829293,026-3.8714.254KDM5AENSG00000073614.13CDS
chrX124,091,707124,091,795+12.0264.217STAG2ENSG00000101972.20Distal intron
chr135,187,97035,188,038-20.5573.133SFPQENSG00000116560.12CDS
chr2177,216,152177,216,199+6.8033.996HNRNPA3ENSG00000170144.22CDS
chr1575,934,42175,934,495+4.3124.207FBXO22ENSG00000167196.143' UTR
chr1205,723,925205,723,928-13.6503.895NUCKS1ENSG00000069275.13CDS
chr1205,723,928205,723,940-16.1073.419NUCKS1ENSG00000069275.13CDS
chr1205,723,940205,723,965-16.9713.270NUCKS1ENSG00000069275.13CDS
chr128,776,9928,777,037+3.2473.302RIMKLBENSG00000166532.163' UTR
chr3138,248,095138,248,213+4.4354.254ARMC8ENSG00000114098.18Distal intron
chr1421,352,78521,352,820-6.2853.478SUPT16HENSG00000092201.10CDS
chr2041,084,46041,084,495+7.8795.283TOP1ENSG00000198900.7CDS
chr2041,084,49541,084,555+11.7444.957TOP1ENSG00000198900.7CDS
chr2041,084,55741,084,568+5.3793.390TOP1ENSG00000198900.7CDS
chr177,239,3787,239,464-3.3133.976PHF23ENSG00000040633.135' UTR
chr7156,952,469156,952,555+5.2874.865NOM1ENSG00000146909.8CDS
chr14102,082,416102,082,444-11.5203.416HSP90AA1ENSG00000080824.19CDS
chr1205,749,952205,749,971-8.1013.313NUCKS1ENSG00000069275.13CDS
chr1205,749,971205,750,030-22.4603.107NUCKS1ENSG00000069275.13CDS
chr1165,503,56765,503,597+400.0004.268MALAT1ENSG00000251562.10ncRNA
chr1165,503,55165,503,567+400.0003.840MALAT1ENSG00000251562.10ncRNA
chr1276,050,52976,050,556-17.6153.705NAP1L1ENSG00000187109.15CDS
chr1276,050,55676,050,572-11.9513.541NAP1L1ENSG00000187109.15CDS
chr764,990,45664,990,532-9.3003.570ERV3-1ENSG00000213462.53' UTR
chr557,262,89957,263,002+3.3403.000GPBP1ENSG00000062194.163' UTR
chr1165,759,522165,759,578-5.3793.223TMCO1ENSG00000143183.18CDS
chr1391,351,37491,351,427+5.3793.585hsa-mir-92a-1MI0000093miRNA
chr1391,351,42891,351,525+11.5203.557hsa-mir-19b-1|hsa-mir-20a|hsa-mir-19a|hsa-mir-92a-1MI0000093||MI0000074||MI0000076||MI0000073miRNA
chr2241,352,121241,352,187+3.5913.973SEPTIN2ENSG00000168385.183' UTR
chr181,343,5461,343,650-3.6863.450LINC00470ENSG00000132204.14ncRNA
chr1434,800,29934,800,365-3.1643.122BAZ1AENSG00000198604.11CDS
chr189,516,9649,517,126+7.2953.138RALBP1ENSG00000017797.13CDS
chr1186,346,170186,346,213-3.1643.254TPRENSG00000047410.14CDS
chr1758,000,89858,000,950-3.3133.923SRSF1ENSG00000136450.133' UTR
chr7156,969,698156,969,821+3.0364.249NOM1ENSG00000146909.8CDS
chr67,303,5447,303,640-7.5083.183SSR1ENSG00000124783.14CDS
chr151,840,30551,840,375-19.7783.780NRDCENSG00000078618.23CDS
chr151,840,22951,840,305-14.9463.558NRDCENSG00000078618.23CDS
chr151,840,37551,840,449-18.1603.106NRDCENSG00000078618.23CDS
chr7156,950,685156,950,726+5.2874.930NOM1ENSG00000146909.8CDS
chr7148,817,889148,817,964-6.1493.350EZH2ENSG00000106462.12CDS
chr12103,947,415103,947,430+23.1183.407HSP90B1ENSG00000166598.16CDS
chr10110,601,837110,601,890+3.2473.197SMC3ENSG00000108055.11CDS
chr7107,200,150107,200,229+3.2473.616HBP1ENSG00000105856.14CDS
chr2049,289,15649,289,226+6.7903.699ZFAS1ENSG00000177410.13ncRNA
chr2231,711,942231,711,970+55.1123.330PTMAENSG00000187514.17CDS
chr2231,711,970231,711,983+51.5393.137PTMAENSG00000187514.17CDS
chr1271,609,72471,609,913-5.2874.561ZFC3H1ENSG00000133858.173' UTR
chr1014,844,21814,844,282+3.9503.378ENSG00000284024ENSG00000284024.43' UTR
chr1391,350,55191,350,601+9.6433.372hsa-mir-18a|hsa-mir-20a|hsa-mir-19a|hsa-mir-17MI0000073||MI0000076||MI0000071||MI0000072miRNA
chr39,447,0479,447,084+3.9763.085SETD5ENSG00000168137.20CDS
chr937,186,83437,186,878+3.1643.431ZCCHC7ENSG00000147905.183' UTR
chr867,137,44667,137,538+3.0364.369CSPP1ENSG00000104218.16CDS
chr6152,970,545152,970,591-5.5724.523FBXO5ENSG00000112029.103' UTR
chr593,683,13293,683,188-4.3124.318NPM1P27ENSG00000249353.2ncRNA
chr128,509,56428,509,640+48.0825.751SNHG3ENSG00000242125.3ncRNA
chr14102,083,034102,083,069-16.0333.344HSP90AA1ENSG00000080824.19CDS
chr2148,692,313148,692,396+7.7733.431EPC2ENSG00000135999.123' UTR
chr723,522,15423,522,264-12.6944.014TRA2AENSG00000164548.125' UTR
chr723,522,08723,522,154-5.3793.312TRA2AENSG00000164548.125' UTR
chr2127,480,851127,480,962-4.1524.713IWS1ENSG00000163166.153' UTR
chr2171,055,332171,055,476-11.0925.912TLK1ENSG00000198586.14Proximal intron
chr1154,173,123154,173,164-3.4243.409TPM3ENSG00000143549.21CDS
chr1154,173,082154,173,123-6.7903.357TPM3ENSG00000143549.21CDS
chr205,544,4745,544,568-7.4994.098GPCPD1ENSG00000125772.143' UTR
chr1592,902,21392,902,277+3.6634.312CHD2ENSG00000173575.233' UTR
chr1592,902,16192,902,213+3.9503.555CHD2ENSG00000173575.23CDS
chr1948,874,19348,874,229+3.1643.213PPP1R15AENSG00000087074.8CDS
chr1540,196,68340,196,774+5.3793.461BUB1BENSG00000156970.13CDS
chr1849,489,40049,489,409-3.2473.302RPL17|RPL17-C18orf32ENSG00000215472.10||ENSG00000265681.8CDS
chr1154,270,783154,270,840+3.9864.269UBAP2LENSG00000143569.193' UTR
chr8123,369,850123,369,954-11.7793.860ATAD2ENSG00000156802.13CDS
chr8123,369,954123,370,027-10.9823.005ATAD2ENSG00000156802.13CDS
chr2216,611,27216,611,340+16.4993.973TPTEP1|ENSG00000283633ENSG00000283633.1||ENSG00000100181.22ncRNA
chr7128,335,826128,335,887-6.6654.098RBM28ENSG00000106344.8CDS
chr826,324,95326,325,042+5.0024.526PPP2R2AENSG00000221914.11Distal intron
chr618,236,45618,236,506-3.4243.256DEKENSG00000124795.17CDS
chr7119,780,613119,780,742-7.3423.441LINC02476ENSG00000225546.6ncRNA
chr5136,182,544136,182,627+3.5914.076SMAD5ENSG00000113658.183' UTR
chr467,472,48567,472,601-6.5104.204CENPCENSG00000145241.113' UTR
chr831,081,09031,081,224+6.5103.920WRNENSG00000165392.11CDS
chr162,458,7692,458,836+23.6235.086CCNFENSG00000162063.133' UTR
chr162,458,7252,458,769+11.9134.166CCNFENSG00000162063.133' UTR
chr162,458,6532,458,725+6.9693.583CCNFENSG00000162063.133' UTR
chr11130,121,693130,121,807+16.8644.231APLP2ENSG00000084234.18CDS
chr7152,072,831152,072,908+13.4035.715GALNT11ENSG00000178234.13Distal intron
chr119,440,4829,440,606+12.1663.501IPO7ENSG00000205339.10CDS
chr7139,307,336139,307,472+3.3134.073UBN2ENSG00000157741.153' UTR
chr128,776,6938,776,803+5.0273.874RIMKLBENSG00000166532.163' UTR
chr1667,166,10667,166,171+3.6634.019HSF4ENSG00000102878.185' splice site
chr2133,558,88533,558,945+144.9389.104SONENSG00000159140.223' UTR
chr2133,558,94533,558,962+71.1778.044SONENSG00000159140.223' UTR
chr2133,558,85633,558,885+33.1176.935SONENSG00000159140.223' UTR
chr473,102,43173,102,550-11.1724.628ANKRD17ENSG00000132466.20CDS
chr468,337,06568,337,241-21.4003.920YTHDC1ENSG00000083896.13CDS
chr1075,022,04675,022,198+5.0223.834KAT6BENSG00000156650.14CDS
chr1918,437,43418,437,491-5.0223.908ISYNA1ENSG00000105655.19Proximal intron
chrX66,000,42266,000,539+9.7224.179ENSG00000237311ENSG00000237311.3ncRNA
chr1775,668,50575,668,626+3.4243.535SAP30BPENSG00000161526.15CDS
chr1145,992,456145,992,546-27.3373.594TXNIPENSG00000265972.63' UTR
chr271,388,40771,388,532+4.2453.007ZNF638ENSG00000075292.193' splice site
chr1135,663,52135,663,667+16.0063.342TRIM44ENSG00000166326.7CDS
chr5141,319,124141,319,232-6.5893.505TAF7ENSG00000178913.9CDS
chr2133,560,60733,560,654+11.0925.698SONENSG00000159140.223' UTR
chr177,314,4877,314,602-4.1524.409GPS2ENSG00000132522.16CDS
chr325,612,52925,612,603-3.5914.076TOP2BENSG00000077097.17CDS
chr687,262,17387,262,221+3.0363.812ZNF292ENSG00000188994.143' UTR
chr1776,734,13976,734,220-24.5485.619SRSF2ENSG00000161547.173' UTR
chr1776,734,22076,734,304-11.4053.361SRSF2ENSG00000161547.173' UTR
chr9132,694,203132,694,315+7.5895.002GTF3C4ENSG00000125484.123' UTR
chr7150,952,313150,952,355-3.2473.116KCNH2ENSG00000055118.175' splice site
chr2131,681,36731,681,492-9.0435.459SCAF4ENSG00000156304.15Distal intron
chrX13,767,12613,767,285+3.3134.158OFD1ENSG00000046651.16CDS
chr2017,942,29517,942,371-3.3413.915SNX5ENSG00000089006.17CDS
chr3167,720,060167,720,193-4.7863.302PDCD10ENSG00000114209.15CDS
chr3157,147,823157,147,918-5.5724.852CCNL1ENSG00000163660.123' UTR
chr631,889,46631,889,572-11.3623.252EHMT2ENSG00000204371.12CDS
chr28,684,1768,684,303+4.7184.722ID2ENSG00000115738.103' UTR
chr4110,198,083110,198,223-4.6394.293ELOVL6ENSG00000170522.105' splice site
chr1100,519,986100,520,080+5.0024.592CDC14AENSG00000079335.203' UTR
chr1750,745,73650,745,920+17.3723.311LUC7L3ENSG00000108848.16CDS
chr1245,964,10545,964,162-4.7184.337SCAF11ENSG00000139218.18CDS
chr1421,353,48621,353,532-6.1493.095SUPT16HENSG00000092201.10CDS
chr1452,727,62552,727,681+5.5663.753PSMC6ENSG00000100519.123' UTR
chr1183,185,06583,185,229+7.9665.104PCF11ENSG00000165494.123' UTR
chr111,025,25911,025,342+8.0493.753TARDBPENSG00000120948.193' UTR
chr1846,804,14546,804,246-5.5724.660PIAS2ENSG00000078043.163' UTR
chr1145,978,381145,978,429+4.6394.461POLR3GLENSG00000121851.13CDS
chr2062,136,85162,136,931-9.2883.533PSMA7ENSG00000101182.15CDS
chr218,217,9818,218,088+4.2163.491ENSG00000278996ENSG00000278996.1ncRNA
chr1114,396,591114,396,672-4.7184.378TRIM33ENSG00000197323.123' UTR
chr1295,485,87795,485,953+9.1663.231METAP2ENSG00000111142.14CDS
chr3143,032,782143,032,831+3.6634.063U2SURPENSG00000163714.18CDS
chr68,079,7848,079,841-5.2933.961EEF1E1ENSG00000124802.123' UTR
chr64,064,8744,064,969+8.6415.116PRPF4BENSG00000112739.173' UTR
chr532,601,15332,601,224+6.4343.685SUB1ENSG00000113387.123' UTR
chr482,424,73882,424,864-34.3745.046HNRNPDLENSG00000152795.183' UTR
chr482,424,66782,424,738-31.8915.001HNRNPDLENSG00000152795.183' UTR
chr226,098,67426,098,723+3.6863.339RAB10ENSG00000084733.11CDS
chr9113,264,377113,264,448+6.5313.190SLC31A1ENSG00000136868.113' UTR
chr2231,712,448231,712,459+59.8183.483PTMAENSG00000187514.17CDS
chr2231,712,459231,712,512+83.7713.018PTMAENSG00000187514.17CDS
chr1165,499,65665,499,659+400.0003.332MALAT1ENSG00000251562.10ncRNA
chr1165,499,65965,499,663+400.0003.232MALAT1ENSG00000251562.10ncRNA
chr2152,711,670152,711,793-14.6304.283PRPF40AENSG00000196504.21Distal intron
chr2231,463,199231,463,202-29.3444.065NCLENSG00000115053.17CDS
chr2231,463,202231,463,230-33.1773.622NCLENSG00000115053.17CDS
chr1736,608,88136,608,948+10.0334.577MRM1ENSG00000278619.53' UTR
chrX49,275,61449,275,746+7.7784.315ENSG00000270012ENSG00000270012.1ncRNA
chr1955,097,76855,097,836-3.1643.293PPP1R12CENSG00000125503.13Distal intron
chr616,146,73816,146,797+5.0024.560MYLIPENSG00000007944.15CDS
chr8123,371,667123,371,700-3.3413.915ATAD2ENSG00000156802.13CDS
chr5151,811,221151,811,339+26.4044.070G3BP1ENSG00000145907.163' UTR
chr2062,905,66162,905,747-4.6013.227DIDO1ENSG00000101191.173' UTR
chr126,770,1736,770,218+18.1153.370PTMSENSG00000159335.18CDS
chr126,770,1616,770,173+10.5603.076PTMSENSG00000159335.18CDS
chr126,770,1566,770,161+10.9423.075PTMSENSG00000159335.18CDS
chr4444,161444,316-7.9665.041ZNF721ENSG00000182903.16CDS
chr1715,535,78215,535,869-17.0044.743TVP23C-CDRT4|TVP23CENSG00000175106.17||ENSG00000259024.7Distal intron
chr143,164,36843,164,488-5.9203.834EBNA1BP2ENSG00000117395.13CDS
chr2127,498,160127,498,236-5.0273.759IWS1ENSG00000163166.15CDS
chr169,111,9319,112,086+5.0223.753C16orf72ENSG00000182831.123' UTR
chr7100,888,560100,888,602+3.0943.122SRRTENSG00000087087.203' UTR
chr487,334,44887,334,568-5.8394.604ENSG00000255723ENSG00000255723.1ncRNA
chr7105,142,434105,142,495-3.8363.330SRPK2ENSG00000135250.17CDS
chr3112,538,143112,538,181-4.1524.256ATG3ENSG00000144848.11CDS
chr2134,124,78034,124,873+6.2924.794MRPS6ENSG00000243927.6Proximal intron
chr8100,918,765100,918,783-42.4834.646YWHAZENSG00000164924.183' UTR
chr8100,918,789100,918,825-47.6704.610YWHAZENSG00000164924.183' UTR
chr8100,918,759100,918,765-17.7084.407YWHAZENSG00000164924.183' UTR
chr8100,918,697100,918,747-8.1153.988YWHAZENSG00000164924.183' UTR
chr8100,918,825100,918,876-15.2923.950YWHAZENSG00000164924.183' UTR
chr8100,918,747100,918,757-5.2933.691YWHAZENSG00000164924.183' UTR
chr299,371,67999,371,731+5.7613.342EIF5BENSG00000158417.11CDS
chr299,371,65599,371,679+4.8593.283EIF5BENSG00000158417.11CDS
chr933,030,65733,030,667+3.0363.869DNAJA1ENSG00000086061.16CDS
chr1857,615,64057,615,662-5.3263.818NARS1ENSG00000134440.12CDS
chr1857,615,66257,615,731-13.6323.289NARS1ENSG00000134440.12CDS
chr128,776,8748,776,973+7.8093.774RIMKLBENSG00000166532.163' UTR
chr9136,840,190136,840,212+10.5055.473RABL6ENSG00000196642.19CDS
chr9136,840,175136,840,190+5.6413.531RABL6ENSG00000196642.19CDS
chr1156,595,313156,595,488-3.3403.454GPATCH4ENSG00000160818.17ncRNA
chr126,770,3916,770,405+11.3865.526PTMSENSG00000159335.18CDS
chr1558,913,50258,913,687-8.9014.317SLTMENSG00000137776.17CDS
chr1165,499,73965,499,751+68.2493.526MALAT1ENSG00000251562.10ncRNA
chr1166,623,97666,624,034+5.0223.627RBM14ENSG00000239306.55' splice site
chr7130,100,335130,100,462+14.6205.170KLHDC10ENSG00000128607.14Distal intron
chr7130,100,493130,100,556+6.4334.920KLHDC10ENSG00000128607.14Distal intron
chr1541,289,00841,289,158+3.6863.658OIP5-AS1ENSG00000247556.6ncRNA
chr7140,719,398140,719,574-3.0364.019BRAFENSG00000157764.143' UTR
chr14102,084,978102,084,998-24.0164.469HSP90AA1ENSG00000080824.19CDS
chr14102,084,947102,084,978-54.2584.293HSP90AA1ENSG00000080824.19CDS
chr14102,084,917102,084,929-53.1754.246HSP90AA1ENSG00000080824.19CDS
chr174,672,2764,672,327-5.2874.950PELP1ENSG00000141456.16CDS
chr174,672,0874,672,276-23.7984.311PELP1ENSG00000141456.16CDS
chr7121,054,224121,054,287+3.5914.166CPED1ENSG00000106034.18Distal intron
chr4176,332,169176,332,231+9.4313.645SPCS3ENSG00000129128.133' UTR
chr2033,853,76033,853,804+3.9503.793CHMP4BENSG00000101421.43' UTR
chr125,242,26425,242,330-8.3203.954RSRP1ENSG00000117616.183' UTR
chr64,064,7994,064,874+4.1333.474PRPF4BENSG00000112739.173' UTR
chr473,258,14373,258,213-3.1643.213ANKRD17ENSG00000132466.205' splice site
chr5145,723,250145,723,423-5.2933.783PRELID2ENSG00000186314.12ncRNA
chr631,829,98831,830,071+9.8664.046HSPA1BENSG00000204388.73' UTR
chr699,399,97399,400,058-8.0653.274PNISRENSG00000132424.173' UTR
chr46,708,0576,708,219-8.3203.730MRFAP1L1ENSG00000178988.113' UTR
chr9113,408,759113,408,825-6.7013.606POLE3ENSG00000148229.13CDS
chr9113,408,825113,408,887-4.6013.573POLE3ENSG00000148229.13CDS
chr135,387,51035,387,607+4.1524.166ZMYM4ENSG00000146463.12CDS
chr162,584,68662,584,766-4.6394.293DOCK7ENSG00000116641.183' UTR
chr4173,332,067173,332,081-47.2294.634HMGB2ENSG00000164104.12CDS
chr4173,332,081173,332,122-400.0003.697HMGB2ENSG00000164104.12CDS
chr4173,332,122173,332,147-63.4163.260HMGB2ENSG00000164104.12CDS
chr12103,939,508103,939,575+25.8643.806HSP90B1ENSG00000166598.16CDS
chr2133,557,97033,558,013+11.1523.188SONENSG00000159140.223' UTR
chr6154,833,425154,833,527+5.2933.812SCAF8ENSG00000213079.103' UTR
chr41,948,6011,948,672+4.6013.198NSD2ENSG00000109685.193' UTR
chr1235,167,298235,167,436-12.0365.555ARID4BENSG00000054267.223' UTR
chr8134,793,151134,793,247-46.7916.598MIR30DHGENSG00000259820.1ncRNA
chr13110,893,040110,893,113-9.3175.500ANKRD10ENSG00000088448.14CDS
chr158,781,43258,781,469-3.0364.019JUNENSG00000177606.83' UTR
chr2169,608,699169,608,753+3.3133.865PPIGENSG00000138398.17CDS
chr1186,341,026186,341,157-8.5283.001TPRENSG00000047410.14CDS
chr177,948,39177,948,454-6.9605.055FUBP1ENSG00000162613.173' UTR
chr5181,260,522181,260,621-4.4354.254TRIM52ENSG00000183718.6CDS
chr1473,106,19573,106,285+5.3793.674RBM25ENSG00000119707.14CDS
chr1155,913,162155,913,238-6.1143.975KHDC4ENSG00000132680.113' UTR
chr10101,799,086101,799,193-4.7293.770OGAENSG00000198408.14CDS
chr710,983,03010,983,117+7.3005.026PHF14ENSG00000106443.17CDS
chr710,982,94810,983,028+3.3403.208PHF14ENSG00000106443.17CDS
chr247,160,64247,160,714-12.3053.249CALM2ENSG00000143933.203' UTR
chr138,863,49138,863,603-10.2125.436MYCBPENSG00000214114.93' UTR
chr1171,532,774171,532,845+5.8394.312PRRC2CENSG00000117523.18CDS
chr165,435,88465,435,999+3.3133.865LEPROTENSG00000213625.93' UTR
chr723,522,31523,522,423-5.6233.963TRA2AENSG00000164548.125' UTR
chr1728,675,00828,675,059+4.3124.207SUPT6HENSG00000109111.15CDS
chr572,196,32272,196,472+11.6334.136MAP1BENSG00000131711.15CDS
chr1728,861,18728,861,279-9.4154.324hsa-mir-144|hsa-mir-4732|hsa-mir-451aMI0000460||MI0017369||MI0001729miRNA
chr1671,460,94371,461,026-3.0363.923ZNF23ENSG00000167377.19Distal intron
chr2169,811,901169,811,989+6.8034.397SSBENSG00000138385.163' UTR
chr150,774,04950,774,184-3.4243.474FAF1ENSG00000185104.21Distal intron
chr1184,690,557184,690,779-11.7444.692EDEM3ENSG00000116406.203' UTR
chr5113,595,029113,595,224+4.4313.683YTHDC2ENSG00000047188.163' UTR
chr1813,124,87013,125,010+3.4243.409CEP192ENSG00000101639.193' UTR
chr2148,025,037148,025,244+6.7623.122MBD5ENSG00000204406.14Distal intron
chr841,621,69341,621,808+21.3115.095GPAT4ENSG00000158669.113' UTR
chr299,376,43299,376,555+31.6304.463EIF5BENSG00000158417.11CDS
chr510,264,92710,264,984+5.1183.256CCT5ENSG00000150753.123' UTR
chr1165,499,92965,499,953+87.8573.205MALAT1ENSG00000251562.10ncRNA
chr1165,499,89765,499,929+400.0003.096MALAT1ENSG00000251562.10ncRNA
chr5163,483,298163,483,339+3.3133.865HMMRENSG00000072571.20CDS
chr347,016,51547,016,579-3.0364.063SETD2ENSG00000181555.223' UTR
chr636,601,98536,602,043+3.6863.878SRSF3ENSG00000112081.17CDS
chr7104,982,112104,982,196-6.4334.968LINC01004ENSG00000228393.6ncRNA
chr2139,297,23439,297,283-8.4214.071BRWD1ENSG00000185658.143' UTR
chr8127,741,201127,741,294+5.8663.207MYCENSG00000136997.213' UTR
chr1689,284,07589,284,158-6.3894.073ANKRD11ENSG00000167522.17CDS
chr126,578,8446,578,881-10.0813.442CHD4ENSG00000111642.16CDS
chr438,694,45138,694,550+3.3134.073KLF3ENSG00000109787.13Proximal intron
chr1068,765,88368,765,902+4.5083.084CCAR1ENSG00000060339.14CDS
chr1068,765,90268,766,003+8.6743.055CCAR1ENSG00000060339.14CDS
chr455,619,07355,619,140-5.8393.869NMUENSG00000109255.11Distal intron
chr142,683,45542,683,466+5.8663.090YBX1ENSG00000065978.19CDS
chr773,478,26773,478,314-4.4833.489BAZ1BENSG00000009954.11CDS
chr7152,072,704152,072,815+21.4586.445GALNT11ENSG00000178234.13Distal intron
chr3143,043,164143,043,246+14.7294.526U2SURPENSG00000163714.18CDS
chr3143,043,129143,043,164+9.1633.763U2SURPENSG00000163714.18CDS
chr3143,043,114143,043,129+7.1983.557U2SURPENSG00000163714.18CDS
chr101,012,4671,012,571+5.5724.876GTPBP4ENSG00000107937.19CDS
chr12123,621,068123,621,173-5.0024.935EIF2B1ENSG00000111361.133' UTR
chr5149,854,815149,854,973+3.1643.330PPARGC1BENSG00000155846.173' UTR
chr2041,092,52041,092,572+5.6813.399TOP1ENSG00000198900.7CDS
chr336,987,87436,987,977-6.3893.923EPM2AIP1ENSG00000178567.83' UTR
chr7119,720,026119,720,127-3.0364.019LINC02476ENSG00000225546.6ncRNA
chr1032,345,37532,345,458-3.3134.365EPC1ENSG00000120616.163' UTR
chr111,023,65911,023,712+3.6863.298TARDBPENSG00000120948.193' UTR
chr5134,859,620134,859,702+7.2373.889C5orf24ENSG00000181904.93' UTR
chr1544,528,96844,529,024+6.9424.026CTDSPL2ENSG00000137770.143' UTR
chr998,015,39598,015,420+40.5114.627ANP32BENSG00000136938.9CDS
chr998,015,42598,015,435+27.5974.487ANP32BENSG00000136938.9CDS
chr998,015,36898,015,395+70.8304.178ANP32BENSG00000136938.9CDS
chr998,015,43598,015,469+27.6183.728ANP32BENSG00000136938.93' UTR
chr137,969,56937,969,620-6.7013.649SF3A3ENSG00000183431.12CDS
chr1276,056,09976,056,116-40.5154.053NAP1L1ENSG00000187109.15CDS
chr1276,056,07876,056,099-34.8713.862NAP1L1ENSG00000187109.15CDS
chr1276,056,06676,056,078-24.3493.775NAP1L1ENSG00000187109.15CDS
chr1276,056,11676,056,137-38.0903.581NAP1L1ENSG00000187109.15CDS
chr1276,056,03676,056,051-16.8213.346NAP1L1ENSG00000187109.15CDS
chr1276,056,05176,056,066-15.4873.199NAP1L1ENSG00000187109.15CDS
chr1276,056,15576,056,162-28.8063.030NAP1L1ENSG00000187109.15CDS
chr177,948,56577,948,624-5.3793.312FUBP1ENSG00000162613.173' UTR
chr1469,771,55869,771,660+31.4053.531SRSF5ENSG00000100650.163' UTR
chr1269,269,84969,269,917+5.5724.828CPSF6ENSG00000111605.183' UTR
chr9128,693,898128,693,909+10.1573.775SETENSG00000119335.18CDS
chr9128,693,909128,693,932+14.0583.447SETENSG00000119335.18CDS
chr9128,693,932128,693,962+35.6993.425SETENSG00000119335.18CDS
chr5146,470,656146,470,752+6.2853.499TCERG1ENSG00000113649.13CDS
chr475,655,77075,655,875-7.2483.224G3BP2ENSG00000138757.15CDS
chr1276,055,04876,055,091-17.2863.021NAP1L1ENSG00000187109.15CDS
chr1155,913,070155,913,147-7.8795.283KHDC4ENSG00000132680.113' UTR
chr1157,326,41257,326,460-3.5413.207SSRP1ENSG00000149136.9CDS
chr299,376,35199,376,432+10.5233.334EIF5BENSG00000158417.11CDS
chr13106,559,599106,559,635-4.2623.055ARGLU1ENSG00000134884.15CDS
chr2108,687,102108,687,191+7.2373.752LIMS1ENSG00000169756.173' UTR
chr3160,433,878160,433,942+3.6634.215SMC4ENSG00000113810.163' UTR
chr1955,096,67655,096,765-4.7523.963PPP1R12CENSG00000125503.13Proximal intron
chr2186,500,234186,500,291+6.9693.711ZC3H15ENSG00000065548.18CDS
chr2186,500,180186,500,234+7.2953.168ZC3H15ENSG00000065548.18CDS
chr5140,491,741140,491,806+9.0435.535ANKHD1-EIF4EBP3|ANKHD1ENSG00000254996.5||ENSG00000131503.21Distal intron
chr5140,491,806140,491,857+4.4354.754ANKHD1|ANKHD1-EIF4EBP3ENSG00000254996.5||ENSG00000131503.21Distal intron
chr1245,961,74145,961,858-4.1524.374SCAF11ENSG00000139218.18CDS
chr143,434,01343,434,110+3.8363.598SZT2ENSG00000198198.17Proximal intron
chrX154,776,931154,776,996+6.4593.260DKC1ENSG00000130826.193' UTR
chr13110,892,745110,892,851-19.8814.500ANKRD10ENSG00000088448.143' UTR
chr13110,892,920110,892,968-10.1713.624ANKRD10ENSG00000088448.143' UTR
chr126,602,0366,602,127-9.9393.794CHD4ENSG00000111642.16CDS
chr126,601,9606,602,036-8.3623.349CHD4ENSG00000111642.16CDS
chr3171,600,877171,601,006-24.2045.031PLD1ENSG00000075651.173' UTR
chr218,401,8188,401,853+26.9045.805ENSG00000280441ENSG00000280441.3ncRNA
chr838,321,02638,321,173-4.7863.102NSD3ENSG00000147548.17CDS
chr1736,586,11236,586,194+3.4243.166GGNBP2ENSG00000278311.5CDS
chr7105,143,160105,143,205-3.3133.923SRPK2ENSG00000135250.17CDS
chr7105,143,205105,143,277-4.7863.102SRPK2ENSG00000135250.17CDS
chr12120,160,735120,160,835-6.9424.539GCN1ENSG00000089154.11Proximal intron
chr2250,199,40650,199,560+3.3133.976TRABDENSG00000170638.103' UTR
chr439,732,34139,732,455+12.1934.688UBE2KENSG00000078140.14Distal intron
chr2152,663,669152,663,737-3.9503.454PRPF40AENSG00000196504.21CDS
chr537,396,49737,396,560+3.6634.104WDR70ENSG00000082068.9CDS
chr2186,501,269186,501,323+6.8034.124ZC3H15ENSG00000065548.18CDS
chr299,364,27199,364,299+7.3005.002EIF5BENSG00000158417.11CDS
chr299,364,31899,364,418+9.5053.701EIF5BENSG00000158417.11CDS
chr7119,782,088119,782,196-5.0223.860LINC02476ENSG00000225546.6ncRNA
chr1145,977,981145,978,090+6.4833.412POLR3GLENSG00000121851.13CDS
chr13110,892,986110,893,040-6.4323.420ANKRD10ENSG00000088448.14CDS
chr1012,035,13912,035,224-4.4833.627UPF2ENSG00000151461.20CDS
chr711,103,54611,103,650+3.1643.169PHF14ENSG00000106443.173' UTR
chr4173,331,967173,332,067-400.0004.925HMGB2ENSG00000164104.123' UTR
chr1150,223,184150,223,241-21.2973.179ANP32EENSG00000143401.15CDS
chr5138,556,573138,556,592-3.8363.491HSPA9ENSG00000113013.16CDS
chr177,562,0337,562,110+3.5914.026SENP3ENSG00000161956.135' UTR
chr41,948,7251,948,808+5.5724.560NSD2ENSG00000109685.193' UTR
chr189,959,4269,959,555+6.7225.265VAPAENSG00000101558.143' UTR
chr2186,495,240186,495,306+4.7523.963ZC3H15ENSG00000065548.18CDS
chr2186,495,306186,495,334+5.6413.612ZC3H15ENSG00000065548.18CDS
chr455,595,26155,595,337-28.2654.983NMUENSG00000109255.113' UTR
chr1449,789,24849,789,332-3.0364.063NEMFENSG00000165525.18CDS
chr203,146,5373,146,681-4.2163.454FASTKD5ENSG00000215251.53' UTR
chr643,628,99543,629,081-5.5843.104GTPBP2ENSG00000172432.19CDS
chr4673,302673,315-4.4633.060ATP5MEENSG00000169020.10CDS
chr1186,339,722186,339,773-3.9503.378TPRENSG00000047410.14CDS
chrX71,465,65871,465,822+3.5883.388TAF1ENSG00000147133.173' UTR
chr2231,712,441231,712,448+60.8783.245PTMAENSG00000187514.17CDS
chr583,056,84683,056,936-3.7073.019TMEM167AENSG00000174695.103' UTR
chr125,242,46825,242,538-3.9763.058RSRP1ENSG00000117616.183' UTR
chr13114,291,630114,291,767+5.2933.812UPF3AENSG00000169062.15CDS
chr631,889,28631,889,343-6.9973.307EHMT2ENSG00000204371.12CDS
chr1255,913,82355,913,948-4.4354.339PYM1ENSG00000170473.173' UTR
chr5149,734,685149,734,751+3.9503.489PPARGC1BENSG00000155846.17Distal intron
chrX66,019,63466,019,703+34.5425.122MIR223HGENSG00000274536.9ncRNA
chrX66,019,70366,019,752+24.5484.856MIR223HGENSG00000274536.9ncRNA
chr1624,750,71024,750,810+3.1643.491TNRC6AENSG00000090905.19CDS
chr1458,270,93358,271,003+4.1524.166PSMA3ENSG00000100567.13CDS
chr9128,694,640128,694,642+36.0143.171SETENSG00000119335.18CDS
chr9128,694,642128,694,673+39.0733.165SETENSG00000119335.18CDS
chr1491,223,34591,223,417+6.2163.890DGLUCYENSG00000133943.21Distal intron
chr1928,540,76228,540,820-4.3124.352ENSG00000283403|ENSG00000266893ENSG00000266893.1||ENSG00000283403.1ncRNA
chr185,252,20585,252,270-4.4354.378C1orf52ENSG00000162642.143' UTR
chr5112,878,253112,878,317-3.0364.063REEP5ENSG00000129625.133' UTR
chr2169,811,665169,811,728+13.3693.819SSBENSG00000138385.16CDS
chr67,309,9137,309,922-5.3263.909SSR1ENSG00000124783.14CDS
chr67,309,9227,309,977-8.1183.447SSR1ENSG00000124783.14CDS
chr792,079,13892,079,216+3.6863.298AKAP9ENSG00000127914.19CDS
chr158,781,55758,781,655-12.3175.110JUNENSG00000177606.83' UTR
chr1327,066,19427,066,319-18.4826.396USP12ENSG00000152484.143' UTR
chrX53,411,76053,411,839-4.8593.383SMC1AENSG00000072501.19CDS
chr764,999,46264,999,548-10.3214.787ERV3-1ENSG00000213462.5Distal intron
chr237,089,70437,089,839+4.2163.415GPATCH11ENSG00000152133.17CDS
chrX81,114,65681,114,780-3.4243.666HMGN5ENSG00000198157.11CDS
chr2169,630,958169,630,989+3.3133.923PPIGENSG00000138398.17CDS
chr2221,670,16721,670,215+3.4243.409ENSG00000207751ENSG00000207751.4ncRNA
chr1583,042,64783,042,781-8.1705.342BTBD1ENSG00000064726.10Distal intron
chr1177,625,74777,625,819-7.0503.276CLNS1AENSG00000074201.9CDS
chr1877,971,60377,971,622-3.3413.961LINC01029ENSG00000265843.3ncRNA
chr5180,847,652180,847,716-5.2933.691ZFP62ENSG00000196670.143' UTR
chr337,324,64937,324,684+3.0364.063GOLGA4ENSG00000144674.18CDS
chr1116,752,78316,752,833+4.4833.627C11orf58ENSG00000110696.10CDS
chr1205,729,600205,729,621-6.2853.613NUCKS1ENSG00000069275.13CDS
chr1246,358,60746,358,731-6.9843.204SLC38A2ENSG00000134294.143' UTR
chr1188,331,37788,331,543-3.1643.330CTSCENSG00000109861.17Distal intron
chr111,024,80211,024,851+3.3134.302TARDBPENSG00000120948.193' UTR
chr1610,482,29610,482,377+31.0405.956ATF7IP2ENSG00000166669.143' UTR
chr539,134,94339,135,017-3.6634.063FYB1ENSG00000082074.19CDS
chr1745,148,54045,148,620+5.6083.044HEXIM1ENSG00000186834.45' UTR
chr162,768,3422,768,400+12.0483.768SRRM2ENSG00000167978.175' splice site
chr162,768,4062,768,475+7.5423.063SRRM2ENSG00000167978.17Proximal intron
chr1743,167,21343,167,345-4.7523.595ENSG00000267002ENSG00000267002.4ncRNA
chr3160,565,386160,565,455-3.1643.213KPNA4ENSG00000186432.105' UTR
chr8103,442,794103,442,954+5.0833.291DCAF13ENSG00000164934.14CDS
chr71,434,4051,434,580-7.0833.221MICALL2ENSG00000164877.193' UTR
chr539,137,59839,137,721-8.9014.274FYB1ENSG00000082074.19CDS
chr7139,417,533139,417,593+5.3813.299LUC7L2|FMC1-LUC7L2ENSG00000146963.18||ENSG00000269955.2CDS
chr1575,873,42575,873,500+3.3133.976UBE2Q2ENSG00000140367.12CDS
chrX119,837,809119,837,873-3.8714.598UPF3BENSG00000125351.14CDS
chr1214,639,920214,639,984+3.4243.374CENPFENSG00000117724.14CDS
chr7151,104,994151,105,076+3.4243.166AGAP3ENSG00000133612.19Distal intron
chr1214,613,801214,613,913+3.9864.502CENPFENSG00000117724.14CDS
chr253,864,88653,864,967-4.7184.489PSME4ENSG00000068878.153' UTR
chr5138,156,924138,157,011-4.7184.337BRD8ENSG00000112983.183' UTR
chr1477,531,40677,531,475-5.8595.109SPTLC2ENSG00000100596.8Distal intron
chr3138,248,961138,249,040+19.0776.678ARMC8ENSG00000114098.18Distal intron
chr3138,249,040138,249,094+19.2715.494ARMC8ENSG00000114098.18Distal intron
chr1434,795,68534,795,766-3.9503.337BAZ1AENSG00000198604.11CDS
chr7111,353,822111,353,988-6.6654.075IMMP2LENSG00000184903.10Distal intron
chr2169,810,282169,810,316+3.9503.697SSBENSG00000138385.16CDS
chr1276,049,77376,049,782-22.3493.122NAP1L1ENSG00000187109.15CDS
chr1452,640,12052,640,181-5.5663.783ERO1AENSG00000197930.133' UTR
chr1330,461,34230,461,428-9.7193.186HMGB1ENSG00000189403.15CDS
chr996,416,76296,416,847-7.5895.222ENSG00000286835ENSG00000286835.1ncRNA
chr1154,170,670154,170,712-4.7523.660TPM3ENSG00000143549.21CDS
chr1063,372,66763,372,797-10.7995.607hsa-mir-1296MI0003780miRNA
chr299,361,76799,361,822+6.7013.513EIF5BENSG00000158417.11CDS
chr5103,203,048103,203,185+6.7224.923PPIP5K2ENSG00000145725.213' UTR
chr890,476,73390,476,933+3.3413.961LINC00534ENSG00000253394.7ncRNA
chr2049,223,27349,223,382+4.1524.213DDX27ENSG00000124228.15CDS
chr1558,893,92858,894,003-4.1333.590SLTMENSG00000137776.17CDS
chr1541,464,77041,464,881+6.4334.968RTF1ENSG00000137815.15CDS
chr1475,053,25775,053,347-3.3134.116ACYP1ENSG00000119640.93' UTR
chr2239,958,46839,958,537+10.5055.473GRAP2ENSG00000100351.17Distal intron
chr2239,958,41539,958,468+4.7523.921GRAP2ENSG00000100351.17Distal intron
chr595,763,50795,763,594+12.8914.827RHOBTB3ENSG00000164292.13CDS
chr1186,351,997186,352,070-4.7293.615TPRENSG00000047410.14CDS
chr175,794,59875,794,668+4.4833.687RABGGTBENSG00000137955.16CDS
chr1911,767,60111,767,697+3.8714.169ZNF441ENSG00000197044.11Proximal intron
chrX124,093,407124,093,457+4.7184.643STAG2ENSG00000101972.20Distal intron
chr6147,205,450147,205,521+5.2933.783STXBP5ENSG00000164506.15Proximal intron
chr5132,618,069132,618,202+5.3793.223RAD50|ENSG00000283782ENSG00000283782.2||ENSG00000113522.14CDS
chr135,751,24835,751,400-7.5733.770CLSPNENSG00000092853.14CDS
chr3143,038,892143,038,952+8.6204.531U2SURPENSG00000163714.18CDS
chr3143,038,952143,038,961+7.7784.315U2SURPENSG00000163714.18CDS
chr12122,591,463122,591,564+3.1643.073KNTC1ENSG00000184445.125' splice site
chr1235,213,831235,213,939-8.2053.581ARID4BENSG00000054267.22CDS
chr628,159,37428,159,439+40.3197.333ZKSCAN8ENSG00000198315.113' UTR
chr628,159,33728,159,374+20.5646.349ZKSCAN8ENSG00000198315.113' UTR
chr9131,143,893131,143,942+4.8593.470NUP214ENSG00000126883.19Proximal intron
chr1180,114,731180,114,808+3.0363.923CEP350ENSG00000135837.163' UTR
chr299,361,57299,361,745+8.2443.018EIF5BENSG00000158417.11CDS
chrX154,777,591154,777,643+5.5724.852DKC1ENSG00000130826.193' UTR
chr7121,050,787121,050,839+5.3813.299CPED1ENSG00000106034.18CDS
chr2232,738,540232,738,604+7.5895.142GIGYF2ENSG00000204120.163' UTR
chr1196,388,90296,389,010-4.1333.563CCDC82ENSG00000149231.165' UTR
chr173,807,7813,807,889-16.1086.075NCBP3ENSG00000074356.173' UTR
chr115,488,0815,488,181-3.9503.722HBE1|HBG2ENSG00000213931.7||ENSG00000196565.15Distal intron
chr164,859,8594,859,972+8.0324.163UBN1ENSG00000118900.15CDS
chr1112,525,900112,525,991-3.5914.384ST7LENSG00000007341.193' UTR
chr1578,548,80678,549,074+9.4353.378PSMA4ENSG00000041357.16CDS
chr232,167,93632,168,033+5.5664.035SLC30A6ENSG00000152683.14Distal intron
chr2047,248,58747,248,696-9.1413.924ZMYND8ENSG00000101040.20Distal intron
chr16,223,5816,223,644-16.6625.281ICMTENSG00000116237.163' UTR
chr5137,752,679137,752,782-8.0733.046HNRNPA0ENSG00000177733.73' UTR
chr2139,296,54039,296,595-31.3747.006BRWD1ENSG00000185658.143' UTR
chr2139,296,59539,296,729-78.0446.359BRWD1ENSG00000185658.143' UTR
chr2114,485,99614,486,045-3.1643.254SAMSN1ENSG00000155307.19CDS
chr7104,981,965104,982,024-3.3414.085LINC01004ENSG00000228393.6ncRNA
chr142,176,58742,176,677-3.9503.523FOXJ3ENSG00000198815.93' UTR
chr1295,483,21295,483,283+19.7783.844METAP2ENSG00000111142.14CDS
chr1745,149,93145,150,013+5.9043.637HEXIM1ENSG00000186834.4CDS
chr9122,090,658122,090,773-3.0364.019TTLL11ENSG00000175764.17Distal intron
chr1242,361,95442,362,107+5.9594.874PPHLN1ENSG00000134283.18Distal intron
chr130,931,53530,931,647-8.8673.850PUM1ENSG00000134644.163' UTR
chr123,281,33123,281,471-7.8403.520LINC01355ENSG00000261326.4ncRNA
chr195,600,1845,600,254-4.4833.715SAFB2ENSG00000130254.12CDS
chr1624,554,84624,554,910+3.8363.491RBBP6ENSG00000122257.20Distal intron
chr146,632,80046,632,875-7.7784.468ATPAF1ENSG00000123472.133' UTR
chr1877,975,52177,975,583-4.4313.450LINC01029ENSG00000265843.3ncRNA
chr177,884,8597,884,962+3.8714.073CHD3ENSG00000170004.19CDS
chr577,708,24077,708,256-4.4313.818TBCAENSG00000171530.15CDS
chr11110,218,926110,219,009-3.1643.546RDXENSG00000137710.17Distal intron
chr2202,302,918202,303,010+16.5844.679NOP58ENSG00000055044.11CDS
chr2202,303,014202,303,059+7.3113.838NOP58ENSG00000055044.11CDS
chr1117,102,402117,102,518+3.9503.378TTF2ENSG00000116830.123' UTR
chr2201,021,567201,021,695-5.5725.176FAM126BENSG00000155744.10Proximal intron
chr1592,984,33892,984,400+4.3124.318CHD2ENSG00000173575.23CDS
chr6122,444,888122,444,975-3.5914.318SERINC1ENSG00000111897.73' UTR
chr2221,760,94821,761,012-5.0223.781MAPK1ENSG00000100030.153' UTR
chr2133,576,76733,576,821+7.5603.387SONENSG00000159140.223' UTR
chr7121,051,904121,051,987+4.7185.055CPED1ENSG00000106034.18Distal intron
chr569,364,84969,364,969-7.3423.518TAF9ENSG00000273841.6CDS
chr2062,136,76262,136,832-14.3104.374PSMA7ENSG00000101182.153' UTR
chr799,576,38099,576,437+5.2874.526ZNF655ENSG00000197343.113' UTR
chr799,576,25599,576,380+10.2404.117ZNF655ENSG00000197343.113' UTR
chr1186,042,40686,042,484-10.2125.758PICALMENSG00000073921.18Distal intron
chr1186,042,48486,042,542-5.8394.180PICALMENSG00000073921.18Distal intron
chr119,597,98319,598,133+13.5494.303NBL1|MICOS10ENSG00000173436.15||ENSG00000158747.15Distal intron
chr46,642,2096,642,271+6.7153.246MRFAP1ENSG00000179010.163' UTR
chr2222,942,104222,942,207+4.1333.474ACSL3ENSG00000123983.153' UTR
chr729,646,00129,646,075-4.7524.023ENSG00000288973ENSG00000288973.1ncRNA
chr14102,084,880102,084,917-56.5005.027HSP90AA1ENSG00000080824.19CDS
chr14102,084,807102,084,828-400.0004.704HSP90AA1ENSG00000080824.19CDS
chr14102,084,867102,084,880-43.6594.451HSP90AA1ENSG00000080824.19CDS
chr14102,084,752102,084,807-400.0004.199HSP90AA1ENSG00000080824.19CDS
chr14102,084,683102,084,726-27.3523.629HSP90AA1ENSG00000080824.19CDS
chr14102,084,726102,084,752-27.4403.606HSP90AA1ENSG00000080824.19CDS
chr6122,427,175122,427,273+17.5916.354HSF2ENSG00000025156.13Distal intron
chr3196,049,285196,049,394-15.0114.088TFRCENSG00000072274.143' UTR
chr227,383,97827,384,046-16.8403.158PPM1GENSG00000115241.11CDS
chr777,737,61677,737,750+11.6805.904RSBN1LENSG00000187257.16Distal intron
chr344,645,14544,645,247+3.9503.697ZNF197ENSG00000186448.153' UTR
chr1568,780,41668,780,459-31.9474.088ANP32AENSG00000140350.15CDS
chr1568,780,40868,780,416-23.0333.929ANP32AENSG00000140350.15CDS
chr1568,780,45968,780,473-11.5953.681ANP32AENSG00000140350.15CDS
chr1068,786,13368,786,182+5.3793.566CCAR1ENSG00000060339.14CDS
chr1068,786,18268,786,219+4.0913.136CCAR1ENSG00000060339.14CDS
chr121,715,38221,715,456-8.0584.277USP48ENSG00000090686.16CDS
chr12103,938,416103,938,459+25.3264.112HSP90B1ENSG00000166598.16CDS
chr12103,938,367103,938,416+39.1393.490HSP90B1ENSG00000166598.16CDS
chr12103,938,339103,938,367+29.3553.239HSP90B1ENSG00000166598.16CDS
chr2132,764,45932,764,520-3.5914.076PAXBP1ENSG00000159086.15CDS
chr131,364,07231,364,191+4.6013.461ZCCHC17ENSG00000121766.16CDS
chr296,894,43696,894,469-3.1643.461FAM178BENSG00000168754.15Proximal intron
chr177,944,07777,944,161-16.9464.579FUBP1ENSG00000162613.173' UTR
chr644,250,45344,250,464+39.1114.183HSP90AB1ENSG00000096384.20CDS
chr644,250,38744,250,453+400.0003.844HSP90AB1ENSG00000096384.20CDS
chr644,250,36844,250,386+34.2703.747HSP90AB1ENSG00000096384.20CDS
chr644,250,33544,250,361+62.9213.640HSP90AB1ENSG00000096384.20CDS
chr644,250,36144,250,368+41.5483.448HSP90AB1ENSG00000096384.20CDS
chr644,250,46444,250,519+67.2363.192HSP90AB1ENSG00000096384.20CDS
chr644,250,31144,250,335+58.4403.015HSP90AB1ENSG00000096384.20CDS
chr1473,107,82073,107,896+4.7184.555RBM25ENSG00000119707.14CDS
chr7121,245,403121,245,490+3.8363.293CPED1ENSG00000106034.18Distal intron
chr2222,303,94222,303,979+3.0363.869ENSG00000286129|BMS1P20ENSG00000286129.1||ENSG00000272779.1ncRNA
chr195,078,0125,078,115+3.8714.213KDM4BENSG00000127663.15Distal intron
chr3184,710,642184,710,741-3.6863.298MAGEF1ENSG00000177383.53' UTR
chr1439,182,16839,182,227+7.0105.131PNNENSG00000100941.93' UTR
chr126,578,5046,578,547-10.3933.255CHD4ENSG00000111642.16CDS
chr126,578,4546,578,504-8.5763.211CHD4ENSG00000111642.16CDS
chr193,876,29293,876,367-7.2954.890DNTTIP2ENSG00000067334.14CDS
chr193,876,36793,876,428-5.5664.013DNTTIP2ENSG00000067334.14CDS
chr1914,089,22414,089,310-8.4213.491SAMD1ENSG00000141858.12CDS
chr1914,089,31014,089,363-4.0913.106SAMD1ENSG00000141858.12CDS
chrX77,652,21077,652,339-3.8363.546ATRXENSG00000085224.23CDS
chr247,160,74547,160,805-7.1273.165CALM2ENSG00000143933.20CDS
chr894,529,06794,529,199-13.0953.415VIRMAENSG00000164944.12CDS
chr4672,490672,519-7.8403.426ATP5MEENSG00000169020.10CDS
chr175,794,67475,794,742+3.6863.707RABGGTBENSG00000137955.163' UTR
chr6166,320,027166,320,164-3.9763.000SFT2D1ENSG00000198818.103' UTR
chr6147,344,175147,344,257+8.0993.394STXBP5ENSG00000164506.15Distal intron
chr1543,814,55343,814,689-4.1524.756MFAP1ENSG00000140259.7CDS
chr171,063,42971,063,558-12.1663.436ZRANB2ENSG00000132485.143' UTR
chr2169,811,304169,811,322+9.3354.146SSBENSG00000138385.16CDS
chr2169,811,270169,811,304+7.8363.473SSBENSG00000138385.16CDS
chr2231,460,671231,460,710-69.5053.620NCLENSG00000115053.17CDS
chr2231,460,668231,460,671-53.9343.536NCLENSG00000115053.17CDS
chr1186,341,334186,341,395-6.1693.716TPRENSG00000047410.14CDS
chr1186,341,251186,341,334-6.0173.213TPRENSG00000047410.14CDS
chr16,223,6496,223,743-72.0466.740ICMTENSG00000116237.163' UTR
chr10102,108,542102,108,563-3.2473.116LDB1ENSG00000198728.11Proximal intron
chr1014,846,63914,846,743+9.4664.473ENSG00000284024ENSG00000284024.43' UTR
chr5139,364,563139,364,669+8.0413.419PAIP2ENSG00000120727.13CDS
chr14100,109,439100,109,506+4.9674.409hsa-mir-342MI0000805miRNA
chr628,159,27728,159,321+4.9674.409ZKSCAN8ENSG00000198315.113' UTR
chr337,325,21237,325,278+6.2163.938GOLGA4ENSG00000144674.18CDS
chr7155,781,417155,781,471+3.8714.491RBM33ENSG00000184863.113' UTR
chr12103,947,667103,947,731+20.4863.598HSP90B1ENSG00000166598.163' UTR
chr994,179,41194,179,503+31.6196.970hsa-let-7dMI0000065miRNA
chr994,179,31794,179,411+20.4514.575hsa-let-7dMI0000065miRNA
chr255,564,35455,564,487-5.1183.456PPP4R3BENSG00000275052.5CDS
chr818,011,66718,011,717+3.8714.254PCM1ENSG00000078674.19CDS
chr18,366,2608,366,335-3.0363.869REREENSG00000142599.19Proximal intron
chr1244,840,659244,840,722-3.6863.378HNRNPUENSG00000153187.20ncRNA
chr1938,841,44338,841,532-9.1633.560HNRNPLENSG00000104824.18Distal intron
chr3157,147,940157,148,020-6.8033.996CCNL1ENSG00000163660.123' UTR
chr1775,778,75275,778,778-3.4243.166H3-3BENSG00000132475.10CDS
chr1207,795,398207,795,480+4.4313.798CD46ENSG00000117335.213' UTR
chr1207,795,310207,795,398+6.2853.664CD46ENSG00000117335.213' UTR
chr191,011,2371,011,326-3.6863.604TMEM259ENSG00000182087.145' splice site

The following table contains identified motifs, where a motif is a short sequence of nucleotides that is significantly enriched in called peaks. Motifs were identified using HOMER's findMotifsGenome.pl tool. Motifs were called at multiple lengths, and results from all examined lengths are aggregated in the table.

The following columns are included in the table:

  •  Motif: logo plot for the identified motif.
  •  IUPAC: sequence of motif in IUPAC code.
  •  Motif length: length of the called motif.
  •  P-value: Significance of the called motif.
  •  -log10(p-value): log transformed significance, a larger number indicates a greater significance.
  •  % Peaks: percent of examined peaks with the identified motif.
  •  % Background: percent of non-peak background regions with the motif.

Please note, this table is interactive. You can search for specific sequences, and can sort the table by any of the columns. The search buttons at thr bottom of the table allow for specific filtering by sequence or motif length.

ENCSR532VUB (K562) Motifs


Motif IUPAC sequence Motif length P-value -log10(p-value) % Peaks % Background
UAGAUUGUGAGC121e-142328.316.280.0
UGUAAGCUCC101e-96223.075.510.02
GAAGARGARGAA121e-95219.7816.791.39
GAAGAAGADG101e-88204.9215.131.17
UCCUUGAGGGCA121e-72166.094.10.01
GAACAAGAAGAA121e-66154.1316.542.32
GAAGAAGAAV101e-65151.8420.133.72
GUAAGCUC81e-65151.75.770.08
GAAGAAGA81e-65149.9720.03.72
UGUUGUGAGGAU121e-47110.232.440.0
UGAUGAHGAUGG121e-46108.1310.261.19
ACCUCACAGG101e-44101.513.080.02
HUUUGUAW81e-43100.8125.388.51
UGAGGGCAGG101e-4298.713.330.03
URCCUCWGARGR121e-4297.833.080.02
AGAAGAAAUHGA121e-4195.4511.151.73
GAWGACGA81e-3887.833.4614.79
GGAGGAGGARGA121e-3785.4810.381.69
CCUACCUC81e-3069.932.820.05
AGGGCAGG81e-2763.295.260.5
UUGUAUNHYU101e-2762.3924.8710.96
UGUACUGUAU101e-2558.1512.183.43
UGUUGUGAGG101e-2353.972.310.05
UUGUGAGG81e-2251.753.720.27
UGUAACUGUU101e-2149.8916.286.3
UUGUCUGUAA101e-1741.393.720.41
AGUGCCUAGCAC121e-1740.851.920.06
UUUUGUAAAUGU121e-1740.039.362.88
UUUGUAUUAAAU121e-1638.753.970.53
UACUGUAC81e-1637.3718.338.8
AUWUGUAAHUWK121e-1535.987.051.88
ACUGUAUUVCUG121e-1535.289.743.37
GGYGGAGGWG101e-1331.027.442.34
UUGUACAAAUUA121e-1330.964.360.86
GMCGAAGAAR101e-1229.770.90.01
CAUGUAUC81e-1229.373.850.7
CCAGUGCC81e-1228.112.440.26
CAGGGUUG81e-1228.081.540.07